arXiv subjects

R. J. Dwayne Miller

Publications and source records attributed to R. J. Dwayne Miller.

24 records · Page 2Linked to original sources

arXiv2017

Low-dose cryo electron ptychography via non-convex Bayesian optimization

Electron ptychography has seen a recent surge of interest for phase sensitive imaging at atomic or near-atomic resolution. However, applications are so far mainly limited to radiation-hard samples because the required doses are too high for imaging biological samples at high resolution. We propose the use of non-convex, Bayesian optimization to overcome this problem and reduce the dose required for successful reconstruction by two orders of magnitude compared to previous experiments. We suggest to use this method for imaging single biological macromolecules at cryogenic temperatures and demonstrate 2D single-particle reconstructions from simulated data with a resolution of 7.9 Å$\,$ at a dose of 20 $e^- / Å^2$. When averaging over only 15 low-dose datasets, a resolution of 4 Å$\,$ is possible for large macromolecular complexes. With its independence from microscope transfer function, direct recovery of phase contrast and better scaling of signal-to-noise ratio, cryo-electron ptychography may become a promising alternative to Zernike phase-contrast microscopy.

physics.comp-ph↗

arXiv2016

Nature does not rely on long-lived electronic quantum coherence for photosynthetic energy transfer

During the first steps of photosynthesis, the energy of impinging solar photons is transformed into electronic excitation energy of the light-harvesting biomolecular complexes. The subsequent energy transfer to the reaction center is understood in terms of exciton quasiparticles which move on a grid of biomolecular sites on typical time scales less than 100 femtoseconds (fs). Since the early days of quantum mechanics, this energy transfer is described as an incoherent Forster hopping with classical site occupation probabilities, but with quantum mechanically determined rate constants. This orthodox picture has been challenged by ultrafast optical spectroscopy experiments with the Fenna-Matthews-Olson protein in which interference oscillatory signals up to 1.5 picoseconds were reported and interpreted as direct evidence of exceptionally long-lived electronic quantum coherence. Here, we show that the optical 2D photon echo spectra of this complex at ambient temperature in aqueous solution do not provide evidence of any long-lived electronic quantum coherence, but confirm the orthodox view of rapidly decaying electronic quantum coherence on a time scale of 60 fs. Our results give no hint that electronic quantum coherence plays any biofunctional role in real photoactive biomolecular complexes. Since this natural energy transfer complex is rather small and has a structurally well defined protein with the distances between bacteriochlorophylls being comparable to other light-harvesting complexes, we anticipate that this finding is general and directly applies to even larger photoactive biomolecular complexes.

physics.bio-ph↗

arXiv2016

Operation regimes, gain dynamics and highly stable operation points of Ho:YLF regenerative amplifiers

We present a comprehensive study of laser pulse amplification with respect to operation regimes, gain dynamics, and highly stable operation points of Ho:YLF regenerative amplifiers (RAs). The findings are expected to be more generic than for this specific case. Operation regimes are distinguished with respect to pulse energy and the appearance of pulse instability, and are studied as a function of the repetition rate, seed energy, and pump intensity. The corresponding gain dynamics are presented, identifying highly stable operation points related to high gain build -up during pumping and high gain depletion during pulse amplification. These operation points are studied numerically and experimentally as a function of several parameters, thereby achieving, for our Ho:YLF RA, highly stable output pulses with measured fluctuations of only 0.19% (standard deviation).

physics.optics↗

arXiv2015

Overcoming Bifurcation Instability in High-Repetition-Rate Ho:YLF Regenerative Amplifiers

We demonstrate a Ho:YLF regenerative amplifier (RA) overcoming bifurcation instability and consequently achieving high extraction energies of 6.9 mJ at a repetition rate of 1 kHz with pulse-to-pulse fluctuations of 1.1%. Measurements of the output pulse energy, corroborated by numerical simulations, identify an operation point that allows high-energy pulse extraction at a minimum noise level. Complete suppression of the onset of bifurcation was achieved by gain saturation after each pumping cycle in the Ho:YLF crystal via lowering the repetition rate and cooling the crystal. Even for moderate cooling, a significant temperature dependence of the Ho:YLF RA performance was observed.

physics.optics↗

arXiv2015

Terahertz-driven linear electron acceleration

The cost, size and availability of electron accelerators is dominated by the achievable accelerating gradient. Conventional high-brightness radio-frequency (RF) accelerating structures operate with 30-50 MeV/m gradients. Electron accelerators driven with optical or infrared sources have demonstrated accelerating gradients orders of magnitude above that achievable with conventional RF structures. However, laser-driven wakefield accelerators require intense femtosecond sources and direct laser-driven accelerators and suffer from low bunch charge, sub-micron tolerances and sub-femtosecond timing requirements due to the short wavelength of operation. Here, we demonstrate the first linear acceleration of electrons with keV energy gain using optically-generated terahertz (THz) pulses. THz-driven accelerating structures enable high-gradient electron or proton accelerators with simple accelerating structures, high repetition rates and significant charge per bunch. Increasing the operational frequency of accelerators into the THz band allows for greatly increased accelerating gradients due to reduced complications with respect to breakdown and pulsed heating. Electric fields in the GV/m range have been achieved in the THz frequency band using all optical methods. With recent advances in the generation of THz pulses via optical rectification of slightly sub-picosecond pulses, in particular improvements in conversion efficiency and multi-cycle pulses, increasing accelerating gradients by two orders of magnitude over conventional linear accelerators (LINACs) has become a possibility. These ultra-compact THz accelerators with extremely short electron bunches hold great potential to have a transformative impact for free electron lasers, future linear particle colliders, ultra-fast electron diffraction, x-ray science, and medical therapy with x-rays and electron beams.

physics.acc-ph↗

arXiv2015

Direct laser acceleration of electrons in free-space

Compact laser-driven accelerators are versatile and powerful tools of unarguable relevance on societal grounds for the diverse purposes of science, health, security, and technology because they bring enormous practicality to state-of-the-art achievements of conventional radio-frequency accelerators. Current benchmarking laser-based technologies rely on a medium to assist the light-matter interaction, which impose material limitations or strongly inhomogeneous fields. The advent of few cycle ultra-intense radially polarized lasers has materialized an extensively studied novel accelerator that adopts the simplest form of laser acceleration and is unique in requiring no medium to achieve strong longitudinal energy transfer directly from laser to particle. Here we present the first observation of direct longitudinal laser acceleration of non-relativistic electrons that undergo highly-directional multi-GeV/m accelerating gradients. This demonstration opens a new frontier for direct laser-driven particle acceleration capable of creating well collimated and relativistic attosecond electron bunches and x-ray pulses.

physics.optics↗