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Ryan A. Loomis

Publications and source records attributed to Ryan A. Loomis.

At least 55 records · Page 3Linked to original sources

Regularized Maximum Likelihood Image Synthesis and Validation for ALMA Continuum Observations of Protoplanetary Disks

Regularized Maximum Likelihood (RML) techniques are a class of image synthesis methods that achieve better angular resolution and image fidelity than traditional methods like CLEAN for sub-mm interferometric observations. To identify best practices for RML imaging, we used the GPU-accelerated open source Python package MPoL, a machine learning-based RML approach, to explore the influence of common RML regularizers (maximum entropy, sparsity, total variation, and total squared variation) on images reconstructed from real and synthetic ALMA continuum observations of protoplanetary disks. We tested two different cross-validation (CV) procedures to characterize their performance and determine optimal prior strengths, and found that CV over a coarse grid of regularization strengths easily identifies a range of models with comparably strong predictive power. To evaluate the performance of RML techniques against a ground truth image, we used MPoL on a synthetic protoplanetary disk dataset and found that RML methods successfully resolve structures at fine spatial scales present in the original simulation. We used ALMA DSHARP observations of the protoplanetary disk around HD 143006 to compare the performance of MPoL and CLEAN, finding that RML imaging improved the spatial resolution of the image by up to a factor of 3 without sacrificing sensitivity. We provide general recommendations for building an RML workflow for image synthesis of ALMA protoplanetary disk observations, including effective use of CV. Using these techniques to improve the imaging resolution of protoplanetary disk observations will enable new science, including the detection of protoplanets embedded in disks.

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Detection of Interstellar $E$-1-cyano-1,3-butadiene in GOTHAM Observations of TMC-1

We report the detection of the lowest energy conformer of $E$-1-cyano-1,3-butadiene ($E$-1-C$_4$H$_5$CN), a linear isomer of pyridine, using the fourth data reduction of the GOTHAM deep spectral survey toward TMC-1 with the 100 m Green Bank Telescope. We performed velocity stacking and matched filter analyses using Markov chain Monte Carlo simulations and find evidence for the presence of this molecule at the 5.1$σ$ level. We derive a total column density of $3.8^{+1.0}_{-0.9}\times 10^{10}$ cm$^{-2}$, which is predominantly found toward two of the four velocity components we observe toward TMC-1. We use this molecule as a proxy for constraining the gas-phase abundance of the apolar hydrocarbon 1,3-butadiene. Based on the three-phase astrochemical modeling code NAUTILUS and an expanded chemical network, our model underestimates the abundance of cyano-1,3-butadiene by a factor of 19, with a peak column density of $2.34 \times 10^{10}\ \mathrm{cm}^{-2}$ for 1,3-butadiene. Compared to the modeling results obtained in previous GOTHAM analyses, the abundance of 1,3-butadiene is increased by about two orders of magnitude. Despite this increase, the modeled abundances of aromatic species do not appear to change and remain underestimated by 1--4 orders of magnitude. Meanwhile, the abundances of the five-membered ring molecules increase proportionally with 1,3-butadiene by two orders of magnitudes. We discuss implications for bottom-up formation routes to aromatic and polycyclic aromatic molecules.

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Mapping Protoplanetary Disk Vertical Structure with CO Isotopologue Line Emission

High spatial resolution observations of CO isotopologue line emission in protoplanetary disks at mid-inclinations (${\approx}$30-75°) allow us to characterize the gas structure in detail, including radial and vertical substructures, emission surface heights and their dependencies on source characteristics, and disk temperature profiles. By combining observations of a suite of CO isotopologues, we can map the 2D (r, z) disk structure from the disk upper atmosphere, as traced by CO, to near the midplane, as probed by less abundant isotopologues. Here, we present high angular resolution (${\lesssim}$0."1 to ${\approx}$0."2; ${\approx}$15-30 au) observations of CO, $^{13}$CO, and C$^{18}$O in either or both J=2-1 and J=3-2 lines in the transition disks around DM Tau, Sz 91, LkCa 15, and HD 34282. We derived line emission surfaces in CO for all disks and in $^{13}$CO for the DM Tau and LkCa 15 disks. With these observations, we do not resolve the vertical structure of C$^{18}$O in any disk, which is instead consistent with C$^{18}$O emission originating from the midplane. Both the J=2-1 and J=3-2 lines show similar heights. Using the derived emission surfaces, we computed radial and vertical gas temperature distributions for each disk, including empirical temperature models for the DM Tau and LkCa 15 disks. After combining our sample with literature sources, we find that $^{13}$CO line emitting heights are also tentatively linked with source characteristics, e.g., stellar host mass, gas temperature, disk size, and show steeper trends than seen in CO emission surfaces.

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Discovery of Interstellar 2-Cyanoindene (2-C$_9$H$_7$CN) in GOTHAM Observations of TMC-1

We present laboratory rotational spectroscopy of five isomers of cyanoindene (2-, 4-, 5-, 6-, and 7-cyanoindene) using a cavity Fourier-transform microwave spectrometer operating between 6-40 GHz. Based on these measurements, we report the detection of 2-cyanoindene (1H-indene-2-carbonitrile; 2-C$_9$H$_7$CN) in GOTHAM line survey observations of the dark molecular cloud TMC-1 using the Green Bank Telescope at centimeter wavelengths. Using a combination of Markov Chain Monte Carlo (MCMC), spectral stacking, and matched filtering techniques, we find evidence for the presence of this molecule at the 6.3$σ$ level. This provides the first direct observation of the ratio of a cyano-substituted polycyclic aromatic hydrocarbon (PAH) to its pure hydrocarbon counterpart, in this case indene, in the same source. We discuss the possible formation chemistry of this species, including why we have only detected one of the isomers in TMC-1. We then examine the overall hydrocarbon:CN-substituted ratio across this and other simpler species, as well as compare to those ratios predicted by astrochemical models. We conclude that while astrochemical models are not yet sufficiently accurate to reproduce absolute abundances of these species, they do a good job at predicting the ratios of hydrocarbon:CN-substituted species, further solidifying -CN tagged species as excellent proxies for their fully-symmetric counterparts.

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ALMA Detection of Dust Trapping around Lagrangian Points in the LkCa 15 Disk

We present deep high-resolution ($\sim$50 mas, 8 au) ALMA 0.88 and 1.3 mm continuum observations of the LkCa 15 disk. The emission morphology shows an inner cavity and three dust rings at both wavelengths, but with slightly narrower rings at the longer wavelength. Along a faint ring at 42 au, we identify two excess emission features at $\sim$10$σ$ significance at both wavelengths: one as an unresolved clump and the other as an extended arc, separated by roughly 120 degrees in azimuth. The clump is unlikely to be a circumplanetary disk (CPD) as the emission peak shifts between the two wavelengths even after accounting for orbital motion. Instead, the morphology of the 42 au ring strongly resembles the characteristic horseshoe orbit produced in planet--disk interaction models, where the clump and the arc trace dust accumulation around Lagrangian points $L_{4}$ and $L_{5}$, respectively. The shape of the 42 au ring, dust trapping in the outer adjacent ring, and the coincidence of the horseshoe ring location with a gap in near-IR scattered light, are all consistent with the scenario of planet sculpting, with the planet likely having a mass between those of Neptune and Saturn. We do not detect point-like emission associated with a CPD around the putative planet location ($0.''27$ in projected separation from the central star at a position angle of $\sim$60\degr), with upper limits of 70 and 33 $μ$Jy at 0.88 and 1.3 mm, respectively, corresponding to dust mass upper limits of 0.02--0.03 $M_{\oplus}$.

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Molecules with ALMA at Planet-forming Scales (MAPS). A Circumplanetary Disk Candidate in Molecular Line Emission in the AS 209 Disk

We report the discovery of a circumplanetary disk (CPD) candidate embedded in the circumstellar disk of the T Tauri star AS 209 at a radial distance of about 200 au (on-sky separation of 1."4 from the star at a position angle of $161^\circ$), isolated via $^{13}$CO $J=2-1$ emission. This is the first instance of CPD detection via gaseous emission capable of tracing the overall CPD mass. The CPD is spatially unresolved with a $117\times82$ mas beam and manifests as a point source in $^{13}$CO, indicating that its diameter is $\lesssim14$ au. The CPD is embedded within an annular gap in the circumstellar disk previously identified using $^{12}$CO and near-infrared scattered light observations, and is associated with localized velocity perturbations in $^{12}$CO. The coincidence of these features suggests that they have a common origin: an embedded giant planet. We use the $^{13}$CO intensity to constrain the CPD gas temperature and mass. We find that the CPD temperature is $\gtrsim35$ K, higher than the circumstellar disk temperature at the radial location of the CPD, 22 K, suggesting that heating sources localized to the CPD must be present. The CPD gas mass is $\gtrsim 0.095 M_{\rm Jup} \simeq 30 M_{\rm Earth}$ adopting a standard $^{13}$CO abundance. From the non-detection of millimeter continuum emission at the location of the CPD ($3σ$ flux density $\lesssim26.4~μ$Jy), we infer that the CPD dust mass is $\lesssim 0.027 M_{\rm Earth} \simeq 2.2$ lunar masses, indicating a low dust-to-gas mass ratio of $\lesssim9\times10^{-4}$. We discuss the formation mechanism of the CPD-hosting giant planet on a wide orbit in the framework of gravitational instability and pebble accretion.

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Molecules with ALMA at Planet-forming Scales (MAPS) III: Characteristics of Radial Chemical Substructures

The Molecules with ALMA at Planet-forming Scales (MAPS) Large Program provides a detailed, high resolution (${\sim}$10-20 au) view of molecular line emission in five protoplanetary disks at spatial scales relevant for planet formation. Here, we present a systematic analysis of chemical substructures in 18 molecular lines toward the MAPS sources: IM Lup, GM Aur, AS 209, HD 163296, and MWC 480. We identify more than 200 chemical substructures, which are found at nearly all radii where line emission is detected. A wide diversity of radial morphologies - including rings, gaps, and plateaus - is observed both within each disk and across the MAPS sample. This diversity in line emission profiles is also present in the innermost 50 au. Overall, this suggests that planets form in varied chemical environments both across disks and at different radii within the same disk. Interior to 150 au, the majority of chemical substructures across the MAPS disks are spatially coincident with substructures in the millimeter continuum, indicative of physical and chemical links between the disk midplane and warm, elevated molecular emission layers. Some chemical substructures in the inner disk and most chemical substructures exterior to 150 au cannot be directly linked to dust substructure, however, which indicates that there are also other causes of chemical substructures, such as snowlines, gradients in UV photon fluxes, ionization, and radially-varying elemental ratios. This implies that chemical substructures could be developed into powerful probes of different disk characteristics, in addition to influencing the environments within which planets assemble. This paper is part of the MAPS special issue of the Astrophysical Journal Supplement.

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CO Line Emission Surfaces and Vertical Structure in Mid-Inclination Protoplanetary Disks

High spatial resolution CO observations of mid-inclination (30-75°) protoplanetary disks offer an opportunity to study the vertical distribution of CO emission and temperature. The asymmetry of line emission relative to the disk major axis allows for a direct mapping of the emission height above the midplane, and for optically-thick, spatially-resolved emission in LTE, the intensity is a measure of the local gas temperature. Our analysis of ALMA archival data yields CO emission surfaces, dynamically-constrained stellar host masses, and disk atmosphere gas temperatures for the disks around: HD 142666, MY Lup, V4046 Sgr, HD 100546, GW Lup, WaOph 6, DoAr 25, Sz 91, CI Tau, and DM Tau. These sources span a wide range in stellar masses (0.50-2.10 M$_{\odot}$), ages (${\sim}$0.3-23 Myr), and CO gas radial emission extents (${\approx}$200-1000 au). This sample nearly triples the number of disks with mapped emission surfaces and confirms the wide diversity in line emitting heights ($z/r\approx0.1$ to ${\gtrsim}0.5$) hinted at in previous studies. We compute radial and vertical CO gas temperature distributions for each disk. A few disks show local temperature dips or enhancements, some of which correspond to dust substructures or the proposed locations of embedded planets. Several emission surfaces also show vertical substructures, which all align with rings and gaps in the millimeter dust. Combining our sample with literature sources, we find that CO line emitting heights weakly decline with stellar mass and gas temperature, which, despite large scatter, is consistent with simple scaling relations. We also observe a correlation between CO emission height and disk size, which is due to the flared structure of disks. Overall, CO emission surfaces trace ${\approx}2$-$5\times$ gas pressure scale heights (H$_{\rm{g}}$) and could potentially be calibrated as empirical tracers of H$_{\rm{g}}$.

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A Search for Heterocycles in GOTHAM Observations of TMC-1

We have conducted an extensive search for nitrogen-, oxygen- and sulfur-bearing heterocycles toward Taurus Molecular Cloud 1 (TMC-1) using the deep, broadband centimeter-wavelength spectral line survey of the region from the GOTHAM large project on the Green Bank Telescope. Despite their ubiquity in terrestrial chemistry, and the confirmed presence of a number of cyclic and polycyclic hydrocarbon species in the source, we find no evidence for the presence of any heterocyclic species. Here, we report the derived upper limits on the column densities of these molecules obtained by Markov Chain Monte Carlo (MCMC) analysis and compare this approach to traditional single-line upper limit measurements. We further hypothesize why these molecules are absent in our data, how they might form in interstellar space, and the nature of observations that would be needed to secure their detection.

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CH3-Terminated Carbon Chains in the GOTHAM Survey of TMC-1: Evidence of Interstellar CH3C7N

We report a systematic study of all known methyl carbon chains toward TMC-1 using the second data release of the GOTHAM survey, as well as a search for larger species. Using Markov-Chain Monte Carlo simulations and spectral line stacking of over 30 rotational transitions, we report statistically significant emission from methylcyanotriacetylene (CH$_3$C$_7$N) at a confidence level of 4.6$σ$, and use it to derive a column density of ${\sim}$10$^{11}$ cm$^{-2}$. We also searched for the related species, methyltetraacetylene (CH$_3$C$_8$H), and place upper limits on the column density of this molecule. By carrying out the above statistical analyses for all other previously detected methyl-terminated carbon chains that have emission lines in our survey, we assess the abundances, excitation conditions, and formation chemistry of methylpolyynes (CH3C$_{2n}$H) and methylcyanopolyynes (CH3C$_{2n-1}$N) in TMC-1, and compare those with predictions from a chemical model. Based on our observed trends in column density and relative populations of the A and E nuclear spin isomers, we find that the methylpolyynes and methylcyanopolyynes families exhibit stark differences from one another, pointing to separate interstellar formation pathways, which is confirmed through gas-grain chemical modeling with nautilus.

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Molecules with ALMA at Planet-forming Scales (MAPS). X. Studying deuteration at high angular resolution toward protoplanetary disks

Deuterium fractionation is dependent on various physical and chemical parameters. Thus, the formation location and thermal history of material in the solar system is often studied by measuring its D/H ratio. This requires knowledge about the deuteration processes operating during the planet formation era. We aim to study these processes by radially resolving the DCN/HCN (at 0.3" resolution) and N$_2$D$^+$/N$_2$H$^+$ (0.3 to 0.9") column density ratios toward the five protoplanetary disks observed by the Molecules with ALMA at Planet-forming scales (MAPS) Large Program. DCN is detected in all five sources, with one newly reported detection. N$_2$D$^+$ is detected in four sources, two of which are newly reported detections. We derive column density profiles that allow us to study the spatial variation of the DCN/HCN and N$_2$D$^+$/N$_2$H$^+$ ratios at high resolution. DCN/HCN varies considerably for different parts of the disks, ranging from $10^{-3}$ to $10^{-1}$. In particular, the inner disk regions generally show significantly lower HCN deuteration compared with the outer disk. In addition, our analysis confirms that two deuterium fractionation channels are active, which can alter the D/H ratio within the pool of organic molecules. N$_2$D$^+$ is found in the cold outer regions beyond $\sim$50 au, with N$_2$D$^+$/N$_2$H$^+$ ranging between $10^{-2}$ and 1 across the disk sample. This is consistent with the theoretical expectation that N$_2$H$^+$ deuteration proceeds via the low-temperature channel only. This paper is part of the MAPS special issue of the Astrophysical Journal Supplement.

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Molecules with ALMA at Planet-forming Scales (MAPS) II: CLEAN Strategies for Synthesizing Images of Molecular Line Emission in Protoplanetary Disks

The Molecules with ALMA at Planet-forming Scales large program (MAPS LP) surveyed the chemical structures of five protoplanetary disks across more than 40 different spectral lines at high angular resolution (0.15" and 0.30" beams for Bands 6 and 3, respectively) and sensitivity (spanning 0.3 - 1.3 mJy/beam and 0.4 - 1.9 mJy/beam for Bands 6 and 3, respectively). In this article, we describe our multi-stage workflow -- built around the CASA tclean image deconvolution procedure -- that we used to generate the core data product of the MAPS LP: the position-position-velocity image cubes for each spectral line. Owing to the expansive nature of the survey, we encountered a range of imaging challenges; some are familiar to the sub-mm protoplanetary disk community, like the benefits of using an accurate CLEAN mask, and others less well-known, like the incorrect default flux scaling of the CLEAN residual map first described in Jorsater & van Moorsel 1995 (the "JvM effect"). We distill lessons learned into recommended workflows for synthesizing image cubes of molecular emission. In particular, we describe how to produce image cubes with accurate fluxes via the "JvM correction," a procedure that is generally applicable to any image synthesized via CLEAN deconvolution but is especially critical for low S/N emission. We further explain how we used visibility tapering to promote a common, fiducial beam size and contextualize the interpretation of signal to noise ratio when detecting molecular emission from protoplanetary disks. This paper is part of the MAPS special issue of the Astrophysical Journal Supplement.

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Molecules with ALMA at Planet-forming Scales (MAPS) XVII: Determining the 2D Thermal Structure of the HD 163296 Disk

Understanding the temperature structure of protoplanetary disks is key to interpreting observations, predicting the physical and chemical evolution of the disk, and modeling planet formation processes. In this study, we constrain the two-dimensional thermal structure of the disk around Herbig Ae star HD 163296. Using the thermo-chemical code RAC2D, we derive a thermal structure that reproduces spatially resolved ALMA observations (~0.12 arcsec (13 au) - 0.25 arcsec (26 au)) of CO J = 2-1, 13CO J = 1-0, 2-1, C18O J = 1-0, 2-1, and C17O J = 1-0, the HD J = 1-0 flux upper limit, the spectral energy distribution (SED), and continuum morphology. The final model incorporates both a radial depletion of CO motivated by a time scale shorter than typical CO gas-phase chemistry (0.01 Myr) and an enhanced temperature near the surface layer of the the inner disk (z/r <= 0.21). This model agrees with the majority of the empirically derived temperatures and observed emitting surfaces derived from the J = 2-1 CO observations. We find an upper limit for the disk mass of 0.35 Msun, using the upper limit of the HD J = 1-0 and J = 2-1 flux. With our final thermal structure, we explore the impact that gaps have on the temperature structure constrained by observations of the resolved gaps. Adding a large gap in the gas and small dust additionally increases gas temperature in the gap by only 5-10%. This paper is part of the MAPS special issue of the Astrophysical Journal Supplement.

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Molecules with ALMA at Planet-forming Scales (MAPS) V: CO gas distributions

Here we present high resolution (15-24 au) observations of CO isotopologue lines from the Molecules with ALMA on Planet-forming Scales (MAPS) ALMA Large Program. Our analysis employs $^{13}$CO and C$^{18}$O ($J$=2-1), (1-0), and C$^{17}$O (1-0) line observations of five protoplanetary disks. We retrieve CO gas density distributions, using three independent methods: (1) a thermo-chemical modeling framework based on the CO data, the broadband spectral energy distribution, and the mm-continuum emission; (2) an empirical temperature distribution based on optically thick CO lines; and (3) a direct fit to the C$^{17}$O hyperfine lines. Results from these methods generally show excellent agreement. The CO gas column density profiles of the five disks show significant variations in the absolute value and the radial shape. Assuming a gas-to-dust mass ratio of 100, all five disks have a global CO-to-H$_2$ abundance of 10-100 times lower than the ISM ratio. The CO gas distributions between 150-400 au match well with models of viscous disks, supporting the long-standing theory. CO gas gaps appear to be correlated with continuum gap locations, but some deep continuum gaps do not have corresponding CO gaps. The relative depths of CO and dust gaps are generally consistent with predictions of planet-disk interactions, but some CO gaps are 5-10 times shallower than predictions based on dust gaps. This paper is part of the MAPS special issue of the Astrophysical Journal Supplement.

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Molecules with ALMA at Planet-forming Scales (MAPS) XIV: Revealing disk substructures in multi-wavelength continuum emission

Constraining dust properties of planet-forming disks via high angular resolution observations is fundamental to understanding how solids are trapped in substructures and how dust growth may be favored or accelerated therein. We use ALMA dust continuum observations of the Molecules with ALMA at Planet-forming Scales (MAPS) disks and explore a large parameter space to constrain the radial distribution of solid mass and maximum grain size in each disk, including or excluding dust scattering. In the nonscattering model, the dust surface density and maximum grain size profiles decrease from the inner disks to the outer disks, with local maxima at the bright ring locations, as expected from dust trapping models. The inferred maximum grain sizes from the inner to outer disks decrease from ~1 cm to 1 mm. For IM Lup, HD 163296, and MWC 480 in the scattering model, two solutions are compatible with their observed inner disk emission: one solution corresponding to a maximum grain size of a few millimeters (similar to the nonscattering model), and the other corresponding to a few hundred micrometer sizes. Based on the estimated Toomre parameter, only IM Lup -- which shows a prominent spiral morphology in millimeter dust -- is found to be gravitationally unstable. The estimated maximum Stokes number in all the disks lies between 0.01 and 0.3, and the estimated turbulence parameters in the rings of AS 209 and HD 163296 are close to the threshold where dust growth is limited by turbulent fragmentation. This paper is part of the MAPS special issue of the Astrophysical Journal Supplement.

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Molecules with ALMA at Planet-forming Scales (MAPS XVIII): Kinematic Substructures in the Disks of HD 163296 and MWC 480

We explore the dynamical structure of the protoplanetary disks surrounding HD 163296 and MWC 480 as part of the Molecules with ALMA at Planet Forming Scales (MAPS) large program. Using the $J = 2-1$ transitions of $^{12}$CO, $^{13}$CO and C$^{18}$O imaged at spatial resolutions of $\sim 0.^{\prime \prime}15$ and with a channel spacing of $200$ ${\rm m\,s^{-1}}$, we find perturbations from Keplerian rotation in the projected velocity fields of both disks ($\lesssim\!5\%$ of the local Keplerian velocity), suggestive of large-scale (10s of au in size), coherent flows. By accounting for the azimuthal dependence on the projection of the velocity field, the velocity fields were decomposed into azimuthally averaged orthogonal components, $v_ϕ$, $v_r$ and $v_z$. Using the optically thick $^{12}$CO emission as a probe of the gas temperature, local variations of $\approx\! 3$ K ($\approx\! 5 \%$ relative changes) were observed and found to be associated with the kinematic substructures. The MWC 480 disk hosts a suite of tightly wound spiral arms. The spirals arms, in conjunction with the highly localized perturbations in the gas velocity structure (kinematic planetary signatures), indicate a giant planet, $\sim\! 1$ $M_{\rm Jup}$, at a radius of $\approx 245$ au. In the disk of HD 163296, the kinematic substructures were consistent with previous studies of Pinte et al. (2018a) and Teague et al. (2018a) advocating for multiple $\sim\! 1$ $M_{\rm Jup}$ planets embedded in the disk. These results demonstrate that molecular line observations that characterize the dynamical structure of disks can be used to search for the signatures of embedded planets. This paper is part of the MAPS special issue of the Astrophysical Journal Supplement.

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Molecules with ALMA at Planet-forming Scales (MAPS) IV: Emission Surfaces and Vertical Distribution of Molecules

The Molecules with ALMA at Planet-forming Scales (MAPS) Large Program provides a unique opportunity to study the vertical distribution of gas, chemistry, and temperature in the protoplanetary disks around IM Lup, GM Aur, AS 209, HD 163296, and MWC 480. By using the asymmetry of molecular line emission relative to the disk major axis, we infer the emission height ($z$) above the midplane as a function of radius ($r$). Using this method, we measure emitting surfaces for a suite of CO isotopologues, HCN, and C$_2$H. We find that $^{12}$CO emission traces the most elevated regions with $z/r > 0.3$, while emission from the less abundant $^{13}$CO and C$^{18}$O probes deeper into the disk at altitudes of $z/r \lesssim 0.2$. C$_2$H and HCN have lower opacities and SNRs, making surface fitting more difficult, and could only be reliably constrained in AS 209, HD 163296, and MWC 480, with $z/r \lesssim 0.1$, i.e., relatively close to the planet-forming midplanes. We determine peak brightness temperatures of the optically thick CO isotopologues and use these to trace 2D disk temperature structures. Several CO temperature profiles and emission surfaces show dips in temperature or vertical height, some of which are associated with gaps and rings in line and/or continuum emission. These substructures may be due to local changes in CO column density, gas surface density, or gas temperatures, and detailed thermo-chemical models are necessary to better constrain their origins and relate the chemical compositions of elevated disk layers with those of planet-forming material in disk midplanes. This paper is part of the MAPS special issue of the Astrophysical Journal Supplement.

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Molecules with ALMA at Planet-forming Scales (MAPS) XIII: HCO$^+$ and disk ionization structure

We observed HCO$^+$ $J=1-0$ and H$^{13}$CO$^+$ $J=1-0$ emission towards the five protoplanetary disks around IM Lup, GM Aur, AS 209, HD 163296, and MWC 480 as part of the MAPS project. HCO$^+$ is detected and mapped at 0.3\arcsec\,resolution in all five disks, while H$^{13}$CO$^+$ is detected (SNR$>6 σ$) towards GM Aur and HD 163296 and tentatively detected (SNR$>3 σ$) towards the other disks by a matched filter analysis. Inside a radius of $R\sim 100$ au, the HCO$^+$ column density is flat or shows a central dip. At outer radii ($\gtrsim 100$ au), the HCO$^+$ column density decreases outwards, while the column density ratio of HCO$^+$/CO is mostly in the range of $\sim 10^{-5}-10^{-4}$. We derived the HCO$^+$ abundance in the warm CO-rich layer, where HCO$^+$ is expected to be the dominant molecular ion. At $R\gtrsim 100$ au, the HCO$^+$ abundance is $\sim 3 \times 10^{-11} - 3\times 10^{-10}$, which is consistent with a template disk model with X-ray ionization. At the smaller radii, the abundance decreases inwards, which indicates that the ionization degree is lower in denser gas, especially inside the CO snow line, where the CO-rich layer is in the midplane. Comparison of template disk models with the column densities of HCO$^+$, N$_2$H$^+$, and N$_2$D$^+$ indicates that the midplane ionization rate is $\gtrsim 10^{-18}$ s$^{-1}$ for the disks around IM Lup, AS 209, and HD 163296. We also find hints of an increased HCO$^+$ abundance around the location of dust continuum gaps in AS 209, HD 163296, and MWC 480. This paper is part of the MAPS special issue of the Astrophysical Journal Supplement.

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