arXiv subjects

Samson Zhou

Publications and source records attributed to Samson Zhou.

94 records · Page 6Linked to original sources

arXiv2017

Optimal Parametric Search for Path and Tree Partitioning

We present linear-time algorithms for partitioning a path or a tree with weights on the vertices by removing $k$ edges to maximize the minimum-weight component. We also use the same framework to partition a path with weight on the vertices, removing $k$ edges to minimize the maximum-weight component. The algorithms use the parametric search paradigm, testing candidate values until an optimum is found while simultaneously reducing the running time needed for each test. For path-partitioning, the algorithm employs a synthetic weighting scheme that results in a constant fraction reduction in running time after each test. For tree-partitioning, our dual-pronged strategy makes progress no matter what the specific structure of our tree is.

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arXiv2017

Streaming Periodicity with Mismatches

We study the problem of finding all $k$-periods of a length-$n$ string $S$, presented as a data stream. $S$ is said to have $k$-period $p$ if its prefix of length $n-p$ differs from its suffix of length $n-p$ in at most $k$ locations. We give a one-pass streaming algorithm that computes the $k$-periods of a string $S$ using $\text{poly}(k, \log n)$ bits of space, for $k$-periods of length at most $\frac{n}{2}$. We also present a two-pass streaming algorithm that computes $k$-periods of $S$ using $\text{poly}(k, \log n)$ bits of space, regardless of period length. We complement these results with comparable lower bounds.

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arXiv2017

Streaming for Aibohphobes: Longest Palindrome with Mismatches

A palindrome is a string that reads the same as its reverse, such as "aibohphobia" (fear of palindromes). Given an integer $d>0$, a $d$-near-palindrome is a string of Hamming distance at most $d$ from its reverse. We study the natural problem of identifying a longest $d$-near-palindrome in data streams. The problem is relevant to the analysis of DNA databases, and to the task of repairing recursive structures in documents such as XML and JSON. We present an algorithm that returns a $d$-near-palindrome whose length is within a multiplicative $(1+ε)$-factor of the longest $d$-near-palindrome. Our algorithm also returns the set of mismatched indices of the $d$-near-palindrome, using $\mathcal{O}\left(\frac{d\log^7 n}{ε\log(1+ε)}\right)$ bits of space, and $\mathcal{O}\left(\frac{d\log^6 n}{ε\log(1+ε)}\right)$ update time per arriving symbol. We show that $Ω(d\log n)$ space is necessary for estimating the length of longest $d$-near-palindromes with high probability. We further obtain an additive-error approximation algorithm and a comparable lower bound, as well as an exact two-pass algorithm that solves the longest $d$-near-palindrome problem using $\mathcal{O}\left(d^2\sqrt{n}\log^6 n\right)$ bits of space.

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arXiv2016

Estimating Weighted Matchings in $o(n)$ Space

We consider the problem of estimating the weight of a maximum weighted matching of a weighted graph $G(V,E)$ whose edges are revealed in a streaming fashion. We develop a reduction from the maximum weighted matching problem to the maximum cardinality matching problem that only doubles the approximation factor of a streaming algorithm developed for the maximum cardinality matching problem. Our results hold for the insertion-only and the dynamic (i.e, insertion and deletion) edge-arrival streaming models. The previous best-known reduction is due to Bury and Schwiegelshohn (ESA 2015) who develop an algorithm whose approximation guarantee scales by a polynomial factor. As an application, we obtain improved estimators for weighted planar graphs and, more generally, for weighted bounded-arboricity graphs, by feeding into our reduction the recent estimators due to Esfandiari et al. (SODA 2015) and to Chitnis et al. (SODA 2016). In particular, we obtain a $(48+ε)$-approximation estimator for the weight of a maximum weighted matching in planar graphs.

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