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Santosh Vempala

Publications and source records attributed to Santosh Vempala.

At least 19 recordsLinked to original sources

Tight Bounds for Learning Polyhedra with a Margin

We give an algorithm for PAC learning intersections of $k$ halfspaces with a $\rho$ margin to within error $\varepsilon$ that runs in time $\textsf{poly}(k, \varepsilon^{-1}, \rho^{-1}) \cdot \exp \left(O(\sqrt{n \log(1/\rho) \log k})\right)$. Notably, this improves on prior work which had an exponential dependence on either $k$ or $\rho^{-1}$ and matches known cryptographic and Statistical Query lower bounds up to the logarithmic factors in $k$ and $\rho$ in the exponent. Our learning algorithm extends to the more general setting when we are only promised that most points have distance at least $\rho$ from the boundary of the polyhedron, making it applicable to continuous distributions as well.

cs.DS

A Unified View of Graph Regularity via Matrix Decompositions

We prove algorithmic weak and \Szemeredi{} regularity lemmas for several classes of sparse graphs in the literature, for which only weak regularity lemmas were previously known. These include core-dense graphs, low threshold rank graphs, and (a version of) $L^p$ upper regular graphs. More precisely, we define \emph{cut pseudorandom graphs}, we prove our regularity lemmas for these graphs, and then we show that cut pseudorandomness captures all of the above graph classes as special cases. The core of our approach is an abstracted matrix decomposition, roughly following Frieze and Kannan [Combinatorica '99] and \Lovasz{} and Szegedy [Geom.\ Func.\ Anal.\ '07], which can be computed by a simple algorithm by Charikar [AAC0 '00]. This gives rise to the class of cut pseudorandom graphs, and using work of Oveis Gharan and Trevisan [TOC '15], it also implies new PTASes for MAX-CUT, MAX-BISECTION, MIN-BISECTION for a significantly expanded class of input graphs. (It is NP Hard to get PTASes for these graphs in general.)

cs.DS

Convergence of Gibbs Sampling: Coordinate Hit-and-Run Mixes Fast

The Gibbs Sampler is a general method for sampling high-dimensional distributions, dating back to Turchin, 1971. In each step of the Gibbs Sampler, we pick a random coordinate and re-sample that coordinate from the distribution induced by fixing all other coordinates. While it has become widely used over the past half-century, guarantees of efficient convergence have been elusive. We show that for a convex body $K$ in $\mathbb{R}^{n}$ with diameter $D$, the mixing time of the Coordinate Hit-and-Run (CHAR) algorithm on $K$ is polynomial in $n$ and $D$. We also give a lower bound on the conductance of CHAR, showing that it is strictly worse than hit-and-run or the ball walk in the worst case.

cs.DS

Solving Sparse Linear Systems Faster than Matrix Multiplication

Can linear systems be solved faster than matrix multiplication? While there has been remarkable progress for the special cases of graph structured linear systems, in the general setting, the bit complexity of solving an $n \times n$ linear system $Ax=b$ is $\tilde{O}(n^ω)$, where $ω< 2.372864$ is the matrix multiplication exponent. Improving on this has been an open problem even for sparse linear systems with poly$(n)$ condition number. In this paper, we present an algorithm that solves linear systems in sparse matrices asymptotically faster than matrix multiplication for any $ω> 2$. This speedup holds for any input matrix $A$ with $o(n^{ω-1}/\log(κ(A)))$ non-zeros, where $κ(A)$ is the condition number of $A$. For poly$(n)$-conditioned matrices with $\tilde{O}(n)$ nonzeros, and the current value of $ω$, the bit complexity of our algorithm to solve to within any $1/\text{poly}(n)$ error is $O(n^{2.331645})$. Our algorithm can be viewed as an efficient, randomized implementation of the block Krylov method via recursive low displacement rank factorizations. It is inspired by the algorithm of [Eberly et al. ISSAC `06 `07] for inverting matrices over finite fields. In our analysis of numerical stability, we develop matrix anti-concentration techniques to bound the smallest eigenvalue and the smallest gap in eigenvalues of semi-random matrices.

cs.DS

Socially Fair k-Means Clustering

We show that the popular k-means clustering algorithm (Lloyd's heuristic), used for a variety of scientific data, can result in outcomes that are unfavorable to subgroups of data (e.g., demographic groups). Such biased clusterings can have deleterious implications for human-centric applications such as resource allocation. We present a fair k-means objective and algorithm to choose cluster centers that provide equitable costs for different groups. The algorithm, Fair-Lloyd, is a modification of Lloyd's heuristic for k-means, inheriting its simplicity, efficiency, and stability. In comparison with standard Lloyd's, we find that on benchmark datasets, Fair-Lloyd exhibits unbiased performance by ensuring that all groups have equal costs in the output k-clustering, while incurring a negligible increase in running time, thus making it a viable fair option wherever k-means is currently used.

cs.LG

Strong Self-Concordance and Sampling

Motivated by the Dikin walk, we develop aspects of an interior-point theory for sampling in high dimension. Specifically, we introduce a symmetric parameter and the notion of strong self-concordance. These properties imply that the corresponding Dikin walk mixes in $\tilde{O}(n\barν)$ steps from a warm start in a convex body in $\mathbb{R}^{n}$ using a strongly self-concordant barrier with symmetric self-concordance parameter $\barν$. For many natural barriers, $\barν$ is roughly bounded by $ν$, the standard self-concordance parameter. We show that this property and strong self-concordance hold for the Lee-Sidford barrier. As a consequence, we obtain the first walk to mix in $\tilde{O}(n^{2})$ steps for an arbitrary polytope in $\mathbb{R}^{n}$. Strong self-concordance for other barriers leads to an interesting (and unexpected) connection -- for the universal and entropic barriers, it is implied by the KLS conjecture.

cs.DS

Multi-Criteria Dimensionality Reduction with Applications to Fairness

Dimensionality reduction is a classical technique widely used for data analysis. One foundational instantiation is Principal Component Analysis (PCA), which minimizes the average reconstruction error. In this paper, we introduce the "multi-criteria dimensionality reduction" problem where we are given multiple objectives that need to be optimized simultaneously. As an application, our model captures several fairness criteria for dimensionality reduction such as our novel Fair-PCA problem and the Nash Social Welfare (NSW) problem. In Fair-PCA, the input data is divided into $k$ groups, and the goal is to find a single $d$-dimensional representation for all groups for which the minimum variance of any one group is maximized. In NSW, the goal is to maximize the product of the individual variances of the groups achieved by the common low-dimensional space. Our main result is an exact polynomial-time algorithm for the two-criterion dimensionality reduction problem when the two criteria are increasing concave functions. As an application of this result, we obtain a polynomial time algorithm for Fair-PCA for $k=2$ groups and a polynomial time algorithm for NSW objective for $k=2$ groups. We also give approximation algorithms for $k>2$. Our technical contribution in the above results is to prove new low-rank properties of extreme point solutions to semi-definite programs. We conclude with experiments indicating the effectiveness of algorithms based on extreme point solutions of semi-definite programs on several real-world data sets.

cs.DM

Robustly Clustering a Mixture of Gaussians

We give an efficient algorithm for robustly clustering of a mixture of two arbitrary Gaussians, a central open problem in the theory of computationally efficient robust estimation, assuming only that the the means of the component Gaussians are well-separated or their covariances are well-separated. Our algorithm and analysis extend naturally to robustly clustering mixtures of well-separated strongly logconcave distributions. The mean separation required is close to the smallest possible to guarantee that most of the measure of each component can be separated by some hyperplane (for covariances, it is the same condition in the second degree polynomial kernel). We also show that for Gaussian mixtures, separation in total variation distance suffices to achieve robust clustering. Our main tools are a new identifiability criterion based on isotropic position and the Fisher discriminant, and a corresponding Sum-of-Squares convex programming relaxation, of fixed degree.

cs.DS

Human-Usable Password Schemas: Beyond Information-Theoretic Security

Password users frequently employ passwords that are too simple, or they just reuse passwords for multiple websites. A common complaint is that utilizing secure passwords is too difficult. One possible solution to this problem is to use a password schema. Password schemas are deterministic functions which map challenges (typically the website name) to responses (passwords). Previous work has been done on developing and analyzing publishable schemas, but these analyses have been information-theoretic, not complexity-theoretic; they consider an adversary with infinite computing power. We perform an analysis with respect to adversaries having currently achievable computing capabilities, assessing the realistic practical security of such schemas. We prove for several specific schemas that a computer is no worse off than an infinite adversary and that it can successfully extract all information from leaked challenges and their respective responses, known as challenge-response pairs. We also show that any schema that hopes to be secure against adversaries with bounded computation should obscure information in a very specific way, by introducing many possible constraints with each challenge-response pair. These surprising results put the analyses of password schemas on a more solid and practical footing.

cs.CR

Gradient Descent for One-Hidden-Layer Neural Networks: Polynomial Convergence and SQ Lower Bounds

We study the complexity of training neural network models with one hidden nonlinear activation layer and an output weighted sum layer. We analyze Gradient Descent applied to learning a bounded target function on $n$ real-valued inputs. We give an agnostic learning guarantee for GD: starting from a randomly initialized network, it converges in mean squared loss to the minimum error (in $2$-norm) of the best approximation of the target function using a polynomial of degree at most $k$. Moreover, for any $k$, the size of the network and number of iterations needed are both bounded by $n^{O(k)}\log(1/ε)$. In particular, this applies to training networks of unbiased sigmoids and ReLUs. We also rigorously explain the empirical finding that gradient descent discovers lower frequency Fourier components before higher frequency components. We complement this result with nearly matching lower bounds in the Statistical Query model. GD fits well in the SQ framework since each training step is determined by an expectation over the input distribution. We show that any SQ algorithm that achieves significant improvement over a constant function with queries of tolerance some inverse polynomial in the input dimensionality $n$ must use $n^{Ω(k)}$ queries even when the target functions are restricted to a set of $n^{O(k)}$ degree-$k$ polynomials, and the input distribution is uniform over the unit sphere; for this class the information-theoretic lower bound is only $Θ(k \log n)$. Our approach for both parts is based on spherical harmonics. We view gradient descent as an operator on the space of functions, and study its dynamics. An essential tool is the Funk-Hecke theorem, which explains the eigenfunctions of this operator in the case of the mean squared loss.

cs.LG

The Price of Fair PCA: One Extra Dimension

We investigate whether the standard dimensionality reduction technique of PCA inadvertently produces data representations with different fidelity for two different populations. We show on several real-world data sets, PCA has higher reconstruction error on population A than on B (for example, women versus men or lower- versus higher-educated individuals). This can happen even when the data set has a similar number of samples from A and B. This motivates our study of dimensionality reduction techniques which maintain similar fidelity for A and B. We define the notion of Fair PCA and give a polynomial-time algorithm for finding a low dimensional representation of the data which is nearly-optimal with respect to this measure. Finally, we show on real-world data sets that our algorithm can be used to efficiently generate a fair low dimensional representation of the data.

cs.LG

Smoothed Analysis of Discrete Tensor Decomposition and Assemblies of Neurons

We analyze linear independence of rank one tensors produced by tensor powers of randomly perturbed vectors. This enables efficient decomposition of sums of high-order tensors. Our analysis builds upon [BCMV14] but allows for a wider range of perturbation models, including discrete ones. We give an application to recovering assemblies of neurons. Assemblies are large sets of neurons representing specific memories or concepts. The size of the intersection of two assemblies has been shown in experiments to represent the extent to which these memories co-occur or these concepts are related; the phenomenon is called association of assemblies. This suggests that an animal's memory is a complex web of associations, and poses the problem of recovering this representation from cognitive data. Motivated by this problem, we study the following more general question: Can we reconstruct the Venn diagram of a family of sets, given the sizes of their $\ell$-wise intersections? We show that as long as the family of sets is randomly perturbed, it is enough for the number of measurements to be polynomially larger than the number of nonempty regions of the Venn diagram to fully reconstruct the diagram.

cs.DS

Usability of Humanly Computable Passwords

Reusing passwords across multiple websites is a common practice that compromises security. Recently, Blum and Vempala have proposed password strategies to help people calculate, in their heads, passwords for different sites without dependence on third-party tools or external devices. Thus far, the security and efficiency of these "mental algorithms" has been analyzed only theoretically. But are such methods usable? We present the first usability study of humanly computable password strategies, involving a learning phase (to learn a password strategy), then a rehearsal phase (to login to a few websites), and multiple follow-up tests. In our user study, with training, participants were able to calculate a deterministic eight-character password for an arbitrary new website in under 20 seconds.

cs.HC

On the Complexity of Random Satisfiability Problems with Planted Solutions

The problem of identifying a planted assignment given a random $k$-SAT formula consistent with the assignment exhibits a large algorithmic gap: while the planted solution becomes unique and can be identified given a formula with $O(n\log n)$ clauses, there are distributions over clauses for which the best known efficient algorithms require $n^{k/2}$ clauses. We propose and study a unified model for planted $k$-SAT, which captures well-known special cases. An instance is described by a planted assignment $σ$ and a distribution on clauses with $k$ literals. We define its distribution complexity as the largest $r$ for which the distribution is not $r$-wise independent ($1 \le r \le k$ for any distribution with a planted assignment). Our main result is an unconditional lower bound, tight up to logarithmic factors, for statistical (query) algorithms [Kearns 1998, Feldman et. al 2012], matching known upper bounds, which, as we show, can be implemented using a statistical algorithm. Since known approaches for problems over distributions have statistical analogues (spectral, MCMC, gradient-based, convex optimization etc.), this lower bound provides a rigorous explanation of the observed algorithmic gap. The proof introduces a new general technique for the analysis of statistical query algorithms. It also points to a geometric paring phenomenon in the space of all planted assignments. We describe consequences of our lower bounds to Feige's refutation hypothesis [Feige 2002] and to lower bounds on general convex programs that solve planted $k$-SAT. Our bounds also extend to other planted $k$-CSP models, and, in particular, provide concrete evidence for the security of Goldreich's one-way function and the associated pseudorandom generator when used with a sufficiently hard predicate [Goldreich 2000].

cs.CC

Creation and analysis of biochemical constraint-based models: the COBRA Toolbox v3.0

COnstraint-Based Reconstruction and Analysis (COBRA) provides a molecular mechanistic framework for integrative analysis of experimental data and quantitative prediction of physicochemically and biochemically feasible phenotypic states. The COBRA Toolbox is a comprehensive software suite of interoperable COBRA methods. It has found widespread applications in biology, biomedicine, and biotechnology because its functions can be flexibly combined to implement tailored COBRA protocols for any biochemical network. Version 3.0 includes new methods for quality controlled reconstruction, modelling, topological analysis, strain and experimental design, network visualisation as well as network integration of chemoinformatic, metabolomic, transcriptomic, proteomic, and thermochemical data. New multi-lingual code integration also enables an expansion in COBRA application scope via high-precision, high-performance, and nonlinear numerical optimisation solvers for multi-scale, multi-cellular and reaction kinetic modelling, respectively. This protocol can be adapted for the generation and analysis of a constraint-based model in a wide variety of molecular systems biology scenarios. This protocol is an update to the COBRA Toolbox 1.0 and 2.0. The COBRA Toolbox 3.0 provides an unparalleled depth of constraint-based reconstruction and analysis methods.

q-bio.QM

Random Overlapping Communities: Approximating Motif Densities of Large Graphs

A wide variety of complex networks (social, biological, information etc.) exhibit local clustering with substantial variation in the clustering coefficient (the probability of neighbors being connected). Existing models of large graphs capture power law degree distributions (Barabási-Albert) and small-world properties (Watts-Strogatz), but only limited clustering behavior. We introduce a generalization of the classical Erdős-Rényi model of random graphs which provably achieves a wide range of desired clustering coefficient, triangle-to-edge and four-cycle-to-edge ratios for any given graph size and edge density. Rather than choosing edges independently at random, in the Random Overlapping Communities model, a graph is generated by choosing a set of random, relatively dense subgraphs ("communities"). We discuss the explanatory power of the model and some of its consequences.

cs.DM

On the Complexity of Learning Neural Networks

The stunning empirical successes of neural networks currently lack rigorous theoretical explanation. What form would such an explanation take, in the face of existing complexity-theoretic lower bounds? A first step might be to show that data generated by neural networks with a single hidden layer, smooth activation functions and benign input distributions can be learned efficiently. We demonstrate here a comprehensive lower bound ruling out this possibility: for a wide class of activation functions (including all currently used), and inputs drawn from any logconcave distribution, there is a family of one-hidden-layer functions whose output is a sum gate, that are hard to learn in a precise sense: any statistical query algorithm (which includes all known variants of stochastic gradient descent with any loss function) needs an exponential number of queries even using tolerance inversely proportional to the input dimensionality. Moreover, this hard family of functions is realizable with a small (sublinear in dimension) number of activation units in the single hidden layer. The lower bound is also robust to small perturbations of the true weights. Systematic experiments illustrate a phase transition in the training error as predicted by the analysis.

cs.LG

The Complexity of Human Computation: A Concrete Model with an Application to Passwords

What can humans compute in their heads? We are thinking of a variety of Crypto Protocols, games like Sudoku, Crossword Puzzles, Speed Chess, and so on. The intent of this paper is to apply the ideas and methods of theoretical computer science to better understand what humans can compute in their heads. For example, can a person compute a function in their head so that an eavesdropper with a powerful computer --- who sees the responses to random input --- still cannot infer responses to new inputs? To address such questions, we propose a rigorous model of human computation and associated measures of complexity. We apply the model and measures first and foremost to the problem of (1) humanly computable password generation, and then consider related problems of (2) humanly computable "one-way functions" and (3) humanly computable "pseudorandom generators". The theory of Human Computability developed here plays by different rules than standard computability, and this takes some getting used to. For reasons to be made clear, the polynomial versus exponential time divide of modern computability theory is irrelevant to human computation. In human computability, the step-counts for both humans and computers must be more concrete. Specifically, we restrict the adversary to at most 10^24 (Avogadro number of) steps. An alternate view of this work is that it deals with the analysis of algorithms and counting steps for the case that inputs are small as opposed to the usual case of inputs large-in-the-limit.

cs.HC