arXiv subjects

Shaoxiong Ji

Publications and source records attributed to Shaoxiong Ji.

At least 55 records · Page 3Linked to original sources

arXiv2023

A Bipartite Graph is All We Need for Enhancing Emotional Reasoning with Commonsense Knowledge

The context-aware emotional reasoning ability of AI systems, especially in conversations, is of vital importance in applications such as online opinion mining from social media and empathetic dialogue systems. Due to the implicit nature of conveying emotions in many scenarios, commonsense knowledge is widely utilized to enrich utterance semantics and enhance conversation modeling. However, most previous knowledge infusion methods perform empirical knowledge filtering and design highly customized architectures for knowledge interaction with the utterances, which can discard useful knowledge aspects and limit their generalizability to different knowledge sources. Based on these observations, we propose a Bipartite Heterogeneous Graph (BHG) method for enhancing emotional reasoning with commonsense knowledge. In BHG, the extracted context-aware utterance representations and knowledge representations are modeled as heterogeneous nodes. Two more knowledge aggregation node types are proposed to perform automatic knowledge filtering and interaction. BHG-based knowledge infusion can be directly generalized to multi-type and multi-grained knowledge sources. In addition, we propose a Multi-dimensional Heterogeneous Graph Transformer (MHGT) to perform graph reasoning, which can retain unchanged feature spaces and unequal dimensions for heterogeneous node types during inference to prevent unnecessary loss of information. Experiments show that BHG-based methods significantly outperform state-of-the-art knowledge infusion methods and show generalized knowledge infusion ability with higher efficiency. Further analysis proves that previous empirical knowledge filtering methods do not guarantee to provide the most useful knowledge information. Our code is available at: https://github.com/SteveKGYang/BHG.

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arXiv2023

Domain-specific Continued Pretraining of Language Models for Capturing Long Context in Mental Health

Pretrained language models have been used in various natural language processing applications. In the mental health domain, domain-specific language models are pretrained and released, which facilitates the early detection of mental health conditions. Social posts, e.g., on Reddit, are usually long documents. However, there are no domain-specific pretrained models for long-sequence modeling in the mental health domain. This paper conducts domain-specific continued pretraining to capture the long context for mental health. Specifically, we train and release MentalXLNet and MentalLongformer based on XLNet and Longformer. We evaluate the mental health classification performance and the long-range ability of these two domain-specific pretrained models. Our models are released in HuggingFace.

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arXiv2023

Emotion fusion for mental illness detection from social media: A survey

Mental illnesses are one of the most prevalent public health problems worldwide, which negatively influence people's lives and society's health. With the increasing popularity of social media, there has been a growing research interest in the early detection of mental illness by analysing user-generated posts on social media. According to the correlation between emotions and mental illness, leveraging and fusing emotion information has developed into a valuable research topic. In this article, we provide a comprehensive survey of approaches to mental illness detection in social media that incorporate emotion fusion. We begin by reviewing different fusion strategies, along with their advantages and disadvantages. Subsequently, we discuss the major challenges faced by researchers working in this area, including issues surrounding the availability and quality of datasets, the performance of algorithms and interpretability. We additionally suggest some potential directions for future research.

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arXiv2023

Patient Outcome and Zero-shot Diagnosis Prediction with Hypernetwork-guided Multitask Learning

Multitask deep learning has been applied to patient outcome prediction from text, taking clinical notes as input and training deep neural networks with a joint loss function of multiple tasks. However, the joint training scheme of multitask learning suffers from inter-task interference, and diagnosis prediction among the multiple tasks has the generalizability issue due to rare diseases or unseen diagnoses. To solve these challenges, we propose a hypernetwork-based approach that generates task-conditioned parameters and coefficients of multitask prediction heads to learn task-specific prediction and balance the multitask learning. We also incorporate semantic task information to improves the generalizability of our task-conditioned multitask model. Experiments on early and discharge notes extracted from the real-world MIMIC database show our method can achieve better performance on multitask patient outcome prediction than strong baselines in most cases. Besides, our method can effectively handle the scenario with limited information and improve zero-shot prediction on unseen diagnosis categories.

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arXiv2022

Automated Clinical Coding: What, Why, and Where We Are?

Clinical coding is the task of transforming medical information in a patient's health records into structured codes so that they can be used for statistical analysis. This is a cognitive and time-consuming task that follows a standard process in order to achieve a high level of consistency. Clinical coding could potentially be supported by an automated system to improve the efficiency and accuracy of the process. We introduce the idea of automated clinical coding and summarise its challenges from the perspective of Artificial Intelligence (AI) and Natural Language Processing (NLP), based on the literature, our project experience over the past two and half years (late 2019 - early 2022), and discussions with clinical coding experts in Scotland and the UK. Our research reveals the gaps between the current deep learning-based approach applied to clinical coding and the need for explainability and consistency in real-world practice. Knowledge-based methods that represent and reason the standard, explainable process of a task may need to be incorporated into deep learning-based methods for clinical coding. Automated clinical coding is a promising task for AI, despite the technical and organisational challenges. Coders are needed to be involved in the development process. There is much to achieve to develop and deploy an AI-based automated system to support coding in the next five years and beyond.

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arXiv2022

Multitask Balanced and Recalibrated Network for Medical Code Prediction

Human coders assign standardized medical codes to clinical documents generated during patients' hospitalization, which is error-prone and labor-intensive. Automated medical coding approaches have been developed using machine learning methods such as deep neural networks. Nevertheless, automated medical coding is still challenging because of the imbalanced class problem, complex code association, and noise in lengthy documents. To solve these issues, we propose a novel neural network called Multitask Balanced and Recalibrated Neural Network. Significantly, the multitask learning scheme shares the relationship knowledge between different code branches to capture the code association. A recalibrated aggregation module is developed by cascading convolutional blocks to extract high-level semantic features that mitigate the impact of noise in documents. Also, the cascaded structure of the recalibrated module can benefit the learning from lengthy notes. To solve the class imbalanced problem, we deploy the focal loss to redistribute the attention of low and high-frequency medical codes. Experimental results show that our proposed model outperforms competitive baselines on a real-world clinical dataset MIMIC-III.

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arXiv2022

Cross-Modality Gated Attention Fusion for Multimodal Sentiment Analysis

Multimodal sentiment analysis is an important research task to predict the sentiment score based on the different modality data from a specific opinion video. Many previous pieces of research have proved the significance of utilizing the shared and unique information across different modalities. However, the high-order combined signals from multimodal data would also help extract satisfied representations. In this paper, we propose CMGA, a Cross-Modality Gated Attention fusion model for MSA that tends to make adequate interaction across different modality pairs. CMGA also adds a forget gate to filter the noisy and redundant signals introduced in the interaction procedure. We experiment on two benchmark datasets in MSA, MOSI, and MOSEI, illustrating the performance of CMGA over several baseline models. We also conduct the ablation study to demonstrate the function of different components inside CMGA.

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arXiv2022

Medical Code Assignment with Gated Convolution and Note-Code Interaction

Medical code assignment from clinical text is a fundamental task in clinical information system management. As medical notes are typically lengthy and the medical coding system's code space is large, this task is a long-standing challenge. Recent work applies deep neural network models to encode the medical notes and assign medical codes to clinical documents. However, these methods are still ineffective as they do not fully encode and capture the lengthy and rich semantic information of medical notes nor explicitly exploit the interactions between the notes and codes. We propose a novel method, gated convolutional neural networks, and a note-code interaction (GatedCNN-NCI), for automatic medical code assignment to overcome these challenges. Our methods capture the rich semantic information of the lengthy clinical text for better representation by utilizing embedding injection and gated information propagation in the medical note encoding module. With a novel note-code interaction design and a graph message passing mechanism, we explicitly capture the underlying dependency between notes and codes, enabling effective code prediction. A weight sharing scheme is further designed to decrease the number of trainable parameters. Empirical experiments on real-world clinical datasets show that our proposed model outperforms state-of-the-art models in most cases, and our model size is on par with light-weighted baselines.

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arXiv2022

Fine-Tuning Pretrained Language Models With Label Attention for Biomedical Text Classification

The massive scale and growth of textual biomedical data have made its indexing and classification increasingly important. However, existing research on this topic mainly utilized convolutional and recurrent neural networks, which generally achieve inferior performance than the novel transformers. On the other hand, systems that apply transformers only focus on the target documents, overlooking the rich semantic information that label descriptions contain. To address this gap, we develop a transformer-based biomedical text classifier that considers label information. The system achieves this with a label attention module incorporated into the fine-tuning process of pretrained language models (PTMs). Our results on two public medical datasets show that the proposed fine-tuning scheme outperforms the vanilla PTMs and state-of-the-art models.

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arXiv2021

MentalBERT: Publicly Available Pretrained Language Models for Mental Healthcare

Mental health is a critical issue in modern society, and mental disorders could sometimes turn to suicidal ideation without adequate treatment. Early detection of mental disorders and suicidal ideation from social content provides a potential way for effective social intervention. Recent advances in pretrained contextualized language representations have promoted the development of several domain-specific pretrained models and facilitated several downstream applications. However, there are no existing pretrained language models for mental healthcare. This paper trains and release two pretrained masked language models, i.e., MentalBERT and MentalRoBERTa, to benefit machine learning for the mental healthcare research community. Besides, we evaluate our trained domain-specific models and several variants of pretrained language models on several mental disorder detection benchmarks and demonstrate that language representations pretrained in the target domain improve the performance of mental health detection tasks.

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arXiv2021

Does the Magic of BERT Apply to Medical Code Assignment? A Quantitative Study

Unsupervised pretraining is an integral part of many natural language processing systems, and transfer learning with language models has achieved remarkable results in many downstream tasks. In the clinical application of medical code assignment, diagnosis and procedure codes are inferred from lengthy clinical notes such as hospital discharge summaries. However, it is not clear if pretrained models are useful for medical code prediction without further architecture engineering. This paper conducts a comprehensive quantitative analysis of various contextualized language models' performance, pretrained in different domains, for medical code assignment from clinical notes. We propose a hierarchical fine-tuning architecture to capture interactions between distant words and adopt label-wise attention to exploit label information. Contrary to current trends, we demonstrate that a carefully trained classical CNN outperforms attention-based models on a MIMIC-III subset with frequent codes. Our empirical findings suggest directions for improving the medical code assignment application.

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arXiv2021

Dynamic Sampling and Selective Masking for Communication-Efficient Federated Learning

Federated learning (FL) is a novel machine learning setting that enables on-device intelligence via decentralized training and federated optimization. Deep neural networks' rapid development facilitates the learning techniques for modeling complex problems and emerges into federated deep learning under the federated setting. However, the tremendous amount of model parameters burdens the communication network with a high load of transportation. This paper introduces two approaches for improving communication efficiency by dynamic sampling and top-$k$ selective masking. The former controls the fraction of selected client models dynamically, while the latter selects parameters with top-$k$ largest values of difference for federated updating. Experiments on convolutional image classification and recurrent language modeling are conducted on three public datasets to show our proposed methods' effectiveness.

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arXiv2021

BiERU: Bidirectional Emotional Recurrent Unit for Conversational Sentiment Analysis

Sentiment analysis in conversations has gained increasing attention in recent years for the growing amount of applications it can serve, e.g., sentiment analysis, recommender systems, and human-robot interaction. The main difference between conversational sentiment analysis and single sentence sentiment analysis is the existence of context information which may influence the sentiment of an utterance in a dialogue. How to effectively encode contextual information in dialogues, however, remains a challenge. Existing approaches employ complicated deep learning structures to distinguish different parties in a conversation and then model the context information. In this paper, we propose a fast, compact and parameter-efficient party-ignorant framework named bidirectional emotional recurrent unit for conversational sentiment analysis. In our system, a generalized neural tensor block followed by a two-channel classifier is designed to perform context compositionality and sentiment classification, respectively. Extensive experiments on three standard datasets demonstrate that our model outperforms the state of the art in most cases.

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arXiv2021

Multitask Recalibrated Aggregation Network for Medical Code Prediction

Medical coding translates professionally written medical reports into standardized codes, which is an essential part of medical information systems and health insurance reimbursement. Manual coding by trained human coders is time-consuming and error-prone. Thus, automated coding algorithms have been developed, building especially on the recent advances in machine learning and deep neural networks. To solve the challenges of encoding lengthy and noisy clinical documents and capturing code associations, we propose a multitask recalibrated aggregation network. In particular, multitask learning shares information across different coding schemes and captures the dependencies between different medical codes. Feature recalibration and aggregation in shared modules enhance representation learning for lengthy notes. Experiments with a real-world MIMIC-III dataset show significantly improved predictive performance.

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arXiv2021

Suicidal Ideation and Mental Disorder Detection with Attentive Relation Networks

Mental health is a critical issue in modern society, and mental disorders could sometimes turn to suicidal ideation without effective treatment. Early detection of mental disorders and suicidal ideation from social content provides a potential way for effective social intervention. However, classifying suicidal ideation and other mental disorders is challenging as they share similar patterns in language usage and sentimental polarity. This paper enhances text representation with lexicon-based sentiment scores and latent topics and proposes using relation networks to detect suicidal ideation and mental disorders with related risk indicators. The relation module is further equipped with the attention mechanism to prioritize more critical relational features. Through experiments on three real-world datasets, our model outperforms most of its counterparts.

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arXiv2021

A Survey on Knowledge Graphs: Representation, Acquisition and Applications

Human knowledge provides a formal understanding of the world. Knowledge graphs that represent structural relations between entities have become an increasingly popular research direction towards cognition and human-level intelligence. In this survey, we provide a comprehensive review of knowledge graph covering overall research topics about 1) knowledge graph representation learning, 2) knowledge acquisition and completion, 3) temporal knowledge graph, and 4) knowledge-aware applications, and summarize recent breakthroughs and perspective directions to facilitate future research. We propose a full-view categorization and new taxonomies on these topics. Knowledge graph embedding is organized from four aspects of representation space, scoring function, encoding models, and auxiliary information. For knowledge acquisition, especially knowledge graph completion, embedding methods, path inference, and logical rule reasoning, are reviewed. We further explore several emerging topics, including meta relational learning, commonsense reasoning, and temporal knowledge graphs. To facilitate future research on knowledge graphs, we also provide a curated collection of datasets and open-source libraries on different tasks. In the end, we have a thorough outlook on several promising research directions.

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arXiv2020

Dilated Convolutional Attention Network for Medical Code Assignment from Clinical Text

Medical code assignment, which predicts medical codes from clinical texts, is a fundamental task of intelligent medical information systems. The emergence of deep models in natural language processing has boosted the development of automatic assignment methods. However, recent advanced neural architectures with flat convolutions or multi-channel feature concatenation ignore the sequential causal constraint within a text sequence and may not learn meaningful clinical text representations, especially for lengthy clinical notes with long-term sequential dependency. This paper proposes a Dilated Convolutional Attention Network (DCAN), integrating dilated convolutions, residual connections, and label attention, for medical code assignment. It adopts dilated convolutions to capture complex medical patterns with a receptive field which increases exponentially with dilation size. Experiments on a real-world clinical dataset empirically show that our model improves the state of the art.

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arXiv2020

Suicidal Ideation Detection: A Review of Machine Learning Methods and Applications

Suicide is a critical issue in modern society. Early detection and prevention of suicide attempts should be addressed to save people's life. Current suicidal ideation detection methods include clinical methods based on the interaction between social workers or experts and the targeted individuals and machine learning techniques with feature engineering or deep learning for automatic detection based on online social contents. This paper is the first survey that comprehensively introduces and discusses the methods from these categories. Domain-specific applications of suicidal ideation detection are reviewed according to their data sources, i.e., questionnaires, electronic health records, suicide notes, and online user content. Several specific tasks and datasets are introduced and summarized to facilitate further research. Finally, we summarize the limitations of current work and provide an outlook of further research directions.

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