arXiv subjects

Sheraz Ahmed

Publications and source records attributed to Sheraz Ahmed.

At least 55 records · Page 3Linked to original sources

arXiv2021

DeepCFD: Efficient Steady-State Laminar Flow Approximation with Deep Convolutional Neural Networks

Computational Fluid Dynamics (CFD) simulation by the numerical solution of the Navier-Stokes equations is an essential tool in a wide range of applications from engineering design to climate modeling. However, the computational cost and memory demand required by CFD codes may become very high for flows of practical interest, such as in aerodynamic shape optimization. This expense is associated with the complexity of the fluid flow governing equations, which include non-linear partial derivative terms that are of difficult solution, leading to long computational times and limiting the number of hypotheses that can be tested during the process of iterative design. Therefore, we propose DeepCFD: a convolutional neural network (CNN) based model that efficiently approximates solutions for the problem of non-uniform steady laminar flows. The proposed model is able to learn complete solutions of the Navier-Stokes equations, for both velocity and pressure fields, directly from ground-truth data generated using a state-of-the-art CFD code. Using DeepCFD, we found a speedup of up to 3 orders of magnitude compared to the standard CFD approach at a cost of low error rates.

physics.comp-ph↗

arXiv2021

Going Beyond Classification Accuracy Metrics in Model Compression

With the rise in edge-computing devices, there has been an increasing demand to deploy energy and resource-efficient models. A large body of research has been devoted to developing methods that can reduce the size of the model considerably without affecting the standard metrics such as top-1 accuracy. However, these pruning approaches tend to result in a significant mismatch in other metrics such as fairness across classes and explainability. To combat such misalignment, we propose a novel multi-part loss function inspired by the knowledge-distillation literature. Through extensive experiments, we demonstrate the effectiveness of our approach across different compression algorithms, architectures, tasks as well as datasets. In particular, we obtain up to $4.1\times$ reduction in the number of prediction mismatches between the compressed and reference models, and up to $5.7\times$ in cases where the reference model makes the correct prediction; all while making no changes to the compression algorithm, and minor modifications to the loss function. Furthermore, we demonstrate how inducing simple alignment between the predictions of the models naturally improves the alignment on other metrics including fairness and attributions. Our framework can thus serve as a simple plug-and-play component for compression algorithms in the future.

cs.CV↗

arXiv2021

Understanding Information Spreading Mechanisms During COVID-19 Pandemic by Analyzing the Impact of Tweet Text and User Features for Retweet Prediction

COVID-19 has affected the world economy and the daily life routine of almost everyone. It has been a hot topic on social media platforms such as Twitter, Facebook, etc. These social media platforms enable users to share information with other users who can reshare this information, thus causing this information to spread. Twitter's retweet functionality allows users to share the existing content with other users without altering the original content. Analysis of social media platforms can help in detecting emergencies during pandemics that lead to taking preventive measures. One such type of analysis is predicting the number of retweets for a given COVID-19 related tweet. Recently, CIKM organized a retweet prediction challenge for COVID-19 tweets focusing on using numeric features only. However, our hypothesis is, tweet text may play a vital role in an accurate retweet prediction. In this paper, we combine numeric and text features for COVID-19 related retweet predictions. For this purpose, we propose two CNN and RNN based models and evaluate the performance of these models on a publicly available TweetsCOV19 dataset using seven different evaluation metrics. Our evaluation results show that combining tweet text with numeric features improves the performance of retweet prediction significantly.

cs.SI↗

arXiv2021

XAI Handbook: Towards a Unified Framework for Explainable AI

The field of explainable AI (XAI) has quickly become a thriving and prolific community. However, a silent, recurrent and acknowledged issue in this area is the lack of consensus regarding its terminology. In particular, each new contribution seems to rely on its own (and often intuitive) version of terms like "explanation" and "interpretation". Such disarray encumbers the consolidation of advances in the field towards the fulfillment of scientific and regulatory demands e.g., when comparing methods or establishing their compliance with respect to biases and fairness constraints. We propose a theoretical framework that not only provides concrete definitions for these terms, but it also outlines all steps necessary to produce explanations and interpretations. The framework also allows for existing contributions to be re-contextualized such that their scope can be measured, thus making them comparable to other methods. We show that this framework is compliant with desiderata on explanations, on interpretability and on evaluation metrics. We present a use-case showing how the framework can be used to compare LIME, SHAP and MDNet, establishing their advantages and shortcomings. Finally, we discuss relevant trends in XAI as well as recommendations for future work, all from the standpoint of our framework.

cs.AI↗

arXiv2021

Deep Learning Based Decision Support for Medicine -- A Case Study on Skin Cancer Diagnosis

Early detection of skin cancers like melanoma is crucial to ensure high chances of survival for patients. Clinical application of Deep Learning (DL)-based Decision Support Systems (DSS) for skin cancer screening has the potential to improve the quality of patient care. The majority of work in the medical AI community focuses on a diagnosis setting that is mainly relevant for autonomous operation. Practical decision support should, however, go beyond plain diagnosis and provide explanations. This paper provides an overview of works towards explainable, DL-based decision support in medical applications with the example of skin cancer diagnosis from clinical, dermoscopic and histopathologic images. Analysis reveals that comparably little attention is payed to the explanation of histopathologic skin images and that current work is dominated by visual relevance maps as well as dermoscopic feature identification. We conclude that future work should focus on meeting the stakeholder's cognitive concepts, providing exhaustive explanations that combine global and local approaches and leverage diverse modalities. Moreover, the possibility to intervene and guide models in case of misbehaviour is identified as a major step towards successful deployment of AI as DL-based DSS and beyond.

cs.CV↗

arXiv2021

PatchX: Explaining Deep Models by Intelligible Pattern Patches for Time-series Classification

The classification of time-series data is pivotal for streaming data and comes with many challenges. Although the amount of publicly available datasets increases rapidly, deep neural models are only exploited in a few areas. Traditional methods are still used very often compared to deep neural models. These methods get preferred in safety-critical, financial, or medical fields because of their interpretable results. However, their performance and scale-ability are limited, and finding suitable explanations for time-series classification tasks is challenging due to the concepts hidden in the numerical time-series data. Visualizing complete time-series results in a cognitive overload concerning our perception and leads to confusion. Therefore, we believe that patch-wise processing of the data results in a more interpretable representation. We propose a novel hybrid approach that utilizes deep neural networks and traditional machine learning algorithms to introduce an interpretable and scale-able time-series classification approach. Our method first performs a fine-grained classification for the patches followed by sample level classification.

cs.LG↗

arXiv2020

Achievements and Challenges in Explaining Deep Learning based Computer-Aided Diagnosis Systems

Remarkable success of modern image-based AI methods and the resulting interest in their applications in critical decision-making processes has led to a surge in efforts to make such intelligent systems transparent and explainable. The need for explainable AI does not stem only from ethical and moral grounds but also from stricter legislation around the world mandating clear and justifiable explanations of any decision taken or assisted by AI. Especially in the medical context where Computer-Aided Diagnosis can have a direct influence on the treatment and well-being of patients, transparency is of utmost importance for safe transition from lab research to real world clinical practice. This paper provides a comprehensive overview of current state-of-the-art in explaining and interpreting Deep Learning based algorithms in applications of medical research and diagnosis of diseases. We discuss early achievements in development of explainable AI for validation of known disease criteria, exploration of new potential biomarkers, as well as methods for the subsequent correction of AI models. Various explanation methods like visual, textual, post-hoc, ante-hoc, local and global have been thoroughly and critically analyzed. Subsequently, we also highlight some of the remaining challenges that stand in the way of practical applications of AI as a clinical decision support tool and provide recommendations for the direction of future research.

cs.AI↗

arXiv2020

P2ExNet: Patch-based Prototype Explanation Network

Deep learning methods have shown great success in several domains as they process a large amount of data efficiently, capable of solving complex classification, forecast, segmentation, and other tasks. However, they come with the inherent drawback of inexplicability limiting their applicability and trustworthiness. Although there exists work addressing this perspective, most of the existing approaches are limited to the image modality due to the intuitive and prominent concepts. Conversely, the concepts in the time-series domain are more complex and non-comprehensive but these and an explanation for the network decision are pivotal in critical domains like medical, financial, or industry. Addressing the need for an explainable approach, we propose a novel interpretable network scheme, designed to inherently use an explainable reasoning process inspired by the human cognition without the need of additional post-hoc explainability methods. Therefore, class-specific patches are used as they cover local concepts relevant to the classification to reveal similarities with samples of the same class. In addition, we introduce a novel loss concerning interpretability and accuracy that constraints P2ExNet to provide viable explanations of the data including relevant patches, their position, class similarities, and comparison methods without compromising accuracy. Analysis of the results on eight publicly available time-series datasets reveals that P2ExNet reaches comparable performance when compared to its counterparts while inherently providing understandable and traceable decisions.

cs.AI↗

arXiv2020

A Hybrid Approach and Unified Framework for Bibliographic Reference Extraction

Publications are an integral part in a scientific community. Bibliographic reference extraction from scientific publication is a challenging task due to diversity in referencing styles and document layout. Existing methods perform sufficiently on one dataset however, applying these solutions to a different dataset proves to be challenging. Therefore, a generic solution was anticipated which could overcome the limitations of the previous approaches. The contribution of this paper is three-fold. First, it presents a novel approach called DeepBiRD which is inspired by human visual perception and exploits layout features to identify individual references in a scientific publication. Second, we release a large dataset for image-based reference detection with 2401 scans containing 38863 references, all manually annotated for individual reference. Third, we present a unified and highly configurable end-to-end automatic bibliographic reference extraction framework called BRExSys which employs DeepBiRD along with state-of-the-art text-based models to detect and visualize references from a bibliographic document. Our proposed approach pre-processes the images in which a hybrid representation is obtained by processing the given image using different computer vision techniques. Then, it performs layout driven reference detection using Mask R-CNN on a given scientific publication. DeepBiRD was evaluated on two different datasets to demonstrate the generalization of this approach. The proposed system achieved an AP50 of 98.56% on our dataset. DeepBiRD significantly outperformed the current state-of-the-art approach on their dataset. Therefore, suggesting that DeepBiRD is significantly superior in performance, generalized, and independent of any domain or referencing style.

cs.CV↗

arXiv2020

Benchmarking adversarial attacks and defenses for time-series data

The adversarial vulnerability of deep networks has spurred the interest of researchers worldwide. Unsurprisingly, like images, adversarial examples also translate to time-series data as they are an inherent weakness of the model itself rather than the modality. Several attempts have been made to defend against these adversarial attacks, particularly for the visual modality. In this paper, we perform detailed benchmarking of well-proven adversarial defense methodologies on time-series data. We restrict ourselves to the $L_{\infty}$ threat model. We also explore the trade-off between smoothness and clean accuracy for regularization-based defenses to better understand the trade-offs that they offer. Our analysis shows that the explored adversarial defenses offer robustness against both strong white-box as well as black-box attacks. This paves the way for future research in the direction of adversarial attacks and defenses, particularly for time-series data.

cs.LG↗

arXiv2020

ProbAct: A Probabilistic Activation Function for Deep Neural Networks

Activation functions play an important role in training artificial neural networks. The majority of currently used activation functions are deterministic in nature, with their fixed input-output relationship. In this work, we propose a novel probabilistic activation function, called ProbAct. ProbAct is decomposed into a mean and variance and the output value is sampled from the formed distribution, making ProbAct a stochastic activation function. The values of mean and variances can be fixed using known functions or trained for each element. In the trainable ProbAct, the mean and the variance of the activation distribution is trained within the back-propagation framework alongside other parameters. We show that the stochastic perturbation induced through ProbAct acts as a viable generalization technique for feature augmentation. In our experiments, we compare ProbAct with well-known activation functions on classification tasks on different modalities: Images(CIFAR-10, CIFAR-100, and STL-10) and Text (Large Movie Review). We show that ProbAct increases the classification accuracy by +2-3% compared to ReLU or other conventional activation functions on both original datasets and when datasets are reduced to 50% and 25% of the original size. Finally, we show that ProbAct learns an ensemble of models by itself that can be used to estimate the uncertainties associated with the prediction and provides robustness to noisy inputs.

cs.LG↗

arXiv2020

G1020: A Benchmark Retinal Fundus Image Dataset for Computer-Aided Glaucoma Detection

Scarcity of large publicly available retinal fundus image datasets for automated glaucoma detection has been the bottleneck for successful application of artificial intelligence towards practical Computer-Aided Diagnosis (CAD). A few small datasets that are available for research community usually suffer from impractical image capturing conditions and stringent inclusion criteria. These shortcomings in already limited choice of existing datasets make it challenging to mature a CAD system so that it can perform in real-world environment. In this paper we present a large publicly available retinal fundus image dataset for glaucoma classification called G1020. The dataset is curated by conforming to standard practices in routine ophthalmology and it is expected to serve as standard benchmark dataset for glaucoma detection. This database consists of 1020 high resolution colour fundus images and provides ground truth annotations for glaucoma diagnosis, optic disc and optic cup segmentation, vertical cup-to-disc ratio, size of neuroretinal rim in inferior, superior, nasal and temporal quadrants, and bounding box location for optic disc. We also report baseline results by conducting extensive experiments for automated glaucoma diagnosis and segmentation of optic disc and optic cup.

eess.IV↗

arXiv2020

Combining Fine- and Coarse-Grained Classifiers for Diabetic Retinopathy Detection

Visual artefacts of early diabetic retinopathy in retinal fundus images are usually small in size, inconspicuous, and scattered all over retina. Detecting diabetic retinopathy requires physicians to look at the whole image and fixate on some specific regions to locate potential biomarkers of the disease. Therefore, getting inspiration from ophthalmologist, we propose to combine coarse-grained classifiers that detect discriminating features from the whole images, with a recent breed of fine-grained classifiers that discover and pay particular attention to pathologically significant regions. To evaluate the performance of this proposed ensemble, we used publicly available EyePACS and Messidor datasets. Extensive experimentation for binary, ternary and quaternary classification shows that this ensemble largely outperforms individual image classifiers as well as most of the published works in most training setups for diabetic retinopathy detection. Furthermore, the performance of fine-grained classifiers is found notably superior than coarse-grained image classifiers encouraging the development of task-oriented fine-grained classifiers modelled after specialist ophthalmologists.

cs.CV↗

arXiv2020

Two-stage framework for optic disc localization and glaucoma classification in retinal fundus images using deep learning

With the advancement of powerful image processing and machine learning techniques, CAD has become ever more prevalent in all fields of medicine including ophthalmology. Since optic disc is the most important part of retinal fundus image for glaucoma detection, this paper proposes a two-stage framework that first detects and localizes optic disc and then classifies it into healthy or glaucomatous. The first stage is based on RCNN and is responsible for localizing and extracting optic disc from a retinal fundus image while the second stage uses Deep CNN to classify the extracted disc into healthy or glaucomatous. In addition to the proposed solution, we also developed a rule-based semi-automatic ground truth generation method that provides necessary annotations for training RCNN based model for automated disc localization. The proposed method is evaluated on seven publicly available datasets for disc localization and on ORIGA dataset, which is the largest publicly available dataset for glaucoma classification. The results of automatic localization mark new state-of-the-art on six datasets with accuracy reaching 100% on four of them. For glaucoma classification we achieved AUC equal to 0.874 which is 2.7% relative improvement over the state-of-the-art results previously obtained for classification on ORIGA. Once trained on carefully annotated data, Deep Learning based methods for optic disc detection and localization are not only robust, accurate and fully automated but also eliminates the need for dataset-dependent heuristic algorithms. Our empirical evaluation of glaucoma classification on ORIGA reveals that reporting only AUC, for datasets with class imbalance and without pre-defined train and test splits, does not portray true picture of the classifier's performance and calls for additional performance metrics to substantiate the results.

cs.CV↗

arXiv2020

QuIS: The Question of Intelligent Site Selection

Site selection is one of the most important decisions to be made by companies. Such a decision depends on various factors of sites, including socio-economic, geographical, ecological, as well as specific requirements of companies. The existing approaches for site selection are manual, subjective, and not scalable. The paper presents the new approach QuIS for site selection, which is automatic, scalable, and more effective than existing state-of-the-art methods. It impartially finds suitables site based on analyzing decisive data of all location factors in both time and space. Another highlight of the proposed method is that the recommendations are supported by explanations, i.e., why something was suggested. To assess the effectiveness of the presented method, a case study on site selection of supermarkets in Germany is performed using real data of more than 200 location factors for 11.162 sites. Evaluation results show that there is a big coverage (86.4 %) between the sites of existing supermarkets selected by economists and the sites recommended by the presented method. In addition, the method also recommends many sites (328) where it is benefial to open a new supermarket. Furthermore, new decisive location factors are revealed, which have an impact on the existence of supermarkets.

stat.AP↗

arXiv2020

QuViS -- The Question of Visual Site Selection

This paper present QuViS, which is an interactive platform for visualization and exploratory data analysis of site selection. The aim of QuViS is to support decision makers and experts during the process of site selection. In addition to visualization engine for exploratory analysis, QuViS is also integrated with our automatic site selection method (QuIS), which recommend different sites automatically based on the selected location factors by economists and experts. To show the potential and highlight the visualization and exploration capabilities of QuViS, a case study on 1,556 German supermarket site selection is performed. The real publicly available dataset contains 450 location factors for all 11,162 multiplicities in Germany, covering the last 10-15 years. Case study results shows that QuViS provides an easy and intuitive way for exploratory analysis of geospatial multidimensional data.

cs.DB↗

arXiv2020

Interpreting Deep Models through the Lens of Data

Identification of input data points relevant for the classifier (i.e. serve as the support vector) has recently spurred the interest of researchers for both interpretability as well as dataset debugging. This paper presents an in-depth analysis of the methods which attempt to identify the influence of these data points on the resulting classifier. To quantify the quality of the influence, we curated a set of experiments where we debugged and pruned the dataset based on the influence information obtained from different methods. To do so, we provided the classifier with mislabeled examples that hampered the overall performance. Since the classifier is a combination of both the data and the model, therefore, it is essential to also analyze these influences for the interpretability of deep learning models. Analysis of the results shows that some interpretability methods can detect mislabels better than using a random approach, however, contrary to the claim of these methods, the sample selection based on the training loss showed a superior performance.

cs.LG↗

arXiv2020

TSViz: Demystification of Deep Learning Models for Time-Series Analysis

This paper presents a novel framework for demystification of convolutional deep learning models for time-series analysis. This is a step towards making informed/explainable decisions in the domain of time-series, powered by deep learning. There have been numerous efforts to increase the interpretability of image-centric deep neural network models, where the learned features are more intuitive to visualize. Visualization in time-series domain is much more complicated as there is no direct interpretation of the filters and inputs as compared to the image modality. In addition, little or no concentration has been devoted for the development of such tools in the domain of time-series in the past. TSViz provides possibilities to explore and analyze a network from different dimensions at different levels of abstraction which includes identification of parts of the input that were responsible for a prediction (including per filter saliency), importance of different filters present in the network for a particular prediction, notion of diversity present in the network through filter clustering, understanding of the main sources of variation learnt by the network through inverse optimization, and analysis of the network's robustness against adversarial noise. As a sanity check for the computed influence values, we demonstrate results regarding pruning of neural networks based on the computed influence information. These representations allow to understand the network features so that the acceptability of deep networks for time-series data can be enhanced. This is extremely important in domains like finance, industry 4.0, self-driving cars, health-care, counter-terrorism etc., where reasons for reaching a particular prediction are equally important as the prediction itself. We assess the proposed framework for interpretability with a set of desirable properties essential for any method.

cs.LG↗