arXiv subjects

Sheraz Ahmed

Publications and source records attributed to Sheraz Ahmed.

72 records · Page 4Linked to original sources

arXiv2020

On Interpretability of Deep Learning based Skin Lesion Classifiers using Concept Activation Vectors

Deep learning based medical image classifiers have shown remarkable prowess in various application areas like ophthalmology, dermatology, pathology, and radiology. However, the acceptance of these Computer-Aided Diagnosis (CAD) systems in real clinical setups is severely limited primarily because their decision-making process remains largely obscure. This work aims at elucidating a deep learning based medical image classifier by verifying that the model learns and utilizes similar disease-related concepts as described and employed by dermatologists. We used a well-trained and high performing neural network developed by REasoning for COmplex Data (RECOD) Lab for classification of three skin tumours, i.e. Melanocytic Naevi, Melanoma and Seborrheic Keratosis and performed a detailed analysis on its latent space. Two well established and publicly available skin disease datasets, PH2 and derm7pt, are used for experimentation. Human understandable concepts are mapped to RECOD image classification model with the help of Concept Activation Vectors (CAVs), introducing a novel training and significance testing paradigm for CAVs. Our results on an independent evaluation set clearly shows that the classifier learns and encodes human understandable concepts in its latent representation. Additionally, TCAV scores (Testing with CAVs) suggest that the neural network indeed makes use of disease-related concepts in the correct way when making predictions. We anticipate that this work can not only increase confidence of medical practitioners on CAD but also serve as a stepping stone for further development of CAV-based neural network interpretation methods.

cs.LG↗

arXiv2020

ImpactCite: An XLNet-based method for Citation Impact Analysis

Citations play a vital role in understanding the impact of scientific literature. Generally, citations are analyzed quantitatively whereas qualitative analysis of citations can reveal deeper insights into the impact of a scientific artifact in the community. Therefore, citation impact analysis (which includes sentiment and intent classification) enables us to quantify the quality of the citations which can eventually assist us in the estimation of ranking and impact. The contribution of this paper is two-fold. First, we benchmark the well-known language models like BERT and ALBERT along with several popular networks for both tasks of sentiment and intent classification. Second, we provide ImpactCite, which is XLNet-based method for citation impact analysis. All evaluations are performed on a set of publicly available citation analysis datasets. Evaluation results reveal that ImpactCite achieves a new state-of-the-art performance for both citation intent and sentiment classification by outperforming the existing approaches by 3.44% and 1.33% in F1-score. Therefore, we emphasize ImpactCite (XLNet-based solution) for both tasks to better understand the impact of a citation. Additional efforts have been performed to come up with CSC-Clean corpus, which is a clean and reliable dataset for citation sentiment classification.

cs.CL↗

arXiv2020

Explaining AI-based Decision Support Systems using Concept Localization Maps

Human-centric explainability of AI-based Decision Support Systems (DSS) using visual input modalities is directly related to reliability and practicality of such algorithms. An otherwise accurate and robust DSS might not enjoy trust of experts in critical application areas if it is not able to provide reasonable justification of its predictions. This paper introduces Concept Localization Maps (CLMs), which is a novel approach towards explainable image classifiers employed as DSS. CLMs extend Concept Activation Vectors (CAVs) by locating significant regions corresponding to a learned concept in the latent space of a trained image classifier. They provide qualitative and quantitative assurance of a classifier's ability to learn and focus on similar concepts important for humans during image recognition. To better understand the effectiveness of the proposed method, we generated a new synthetic dataset called Simple Concept DataBase (SCDB) that includes annotations for 10 distinguishable concepts, and made it publicly available. We evaluated our proposed method on SCDB as well as a real-world dataset called CelebA. We achieved localization recall of above 80% for most relevant concepts and average recall above 60% for all concepts using SE-ResNeXt-50 on SCDB. Our results on both datasets show great promise of CLMs for easing acceptance of DSS in practice.

cs.LG↗

arXiv2020

If You Like It, GAN It. Probabilistic Multivariate Times Series Forecast With GAN

The contribution of this paper is two-fold. First, we present ProbCast - a novel probabilistic model for multivariate time-series forecasting. We employ a conditional GAN framework to train our model with adversarial training. Second, we propose a framework that lets us transform a deterministic model into a probabilistic one with improved performance. The motivation of the framework is to either transform existing highly accurate point forecast models to their probabilistic counterparts or to train GANs stably by selecting the architecture of GAN's component carefully and efficiently. We conduct experiments over two publicly available datasets namely electricity consumption dataset and exchange-rate dataset. The results of the experiments demonstrate the remarkable performance of our model as well as the successful application of our proposed framework.

cs.LG↗

arXiv2020

TSInsight: A local-global attribution framework for interpretability in time-series data

With the rise in the employment of deep learning methods in safety-critical scenarios, interpretability is more essential than ever before. Although many different directions regarding interpretability have been explored for visual modalities, time-series data has been neglected with only a handful of methods tested due to their poor intelligibility. We approach the problem of interpretability in a novel way by proposing TSInsight where we attach an auto-encoder to the classifier with a sparsity-inducing norm on its output and fine-tune it based on the gradients from the classifier and a reconstruction penalty. TSInsight learns to preserve features that are important for prediction by the classifier and suppresses those that are irrelevant i.e. serves as a feature attribution method to boost interpretability. In contrast to most other attribution frameworks, TSInsight is capable of generating both instance-based and model-based explanations. We evaluated TSInsight along with 9 other commonly used attribution methods on 8 different time-series datasets to validate its efficacy. Evaluation results show that TSInsight naturally achieves output space contraction, therefore, is an effective tool for the interpretability of deep time-series models.

cs.LG↗

arXiv2019

A Robust and Precise ConvNet for small non-coding RNA classification (RPC-snRC)

Functional or non-coding RNAs are attracting more attention as they are now potentially considered valuable resources in the development of new drugs intended to cure several human diseases. The identification of drugs targeting the regulatory circuits of functional RNAs depends on knowing its family, a task which is known as RNA sequence classification. State-of-the-art small noncoding RNA classification methodologies take secondary structural features as input. However, in such classification, feature extraction approaches only take global characteristics into account and completely oversight co-relative effect of local structures. Furthermore secondary structure based approaches incorporate high dimensional feature space which proves computationally expensive. This paper proposes a novel Robust and Precise ConvNet (RPC-snRC) methodology which classifies small non-coding RNAs sequences into their relevant families by utilizing the primary sequence of RNAs. RPC-snRC methodology learns hierarchical representation of features by utilizing positioning and occurrences information of nucleotides. To avoid exploding and vanishing gradient problems, we use an approach similar to DenseNet in which gradient can flow straight from subsequent layers to previous layers. In order to assess the effectiveness of deeper architectures for small non-coding RNA classification, we also adapted two ResNet architectures having different number of layers. Experimental results on a benchmark small non-coding RNA dataset show that our proposed methodology does not only outperform existing small non-coding RNA classification approaches with a significant performance margin of 10% but it also outshines adapted ResNet architectures.

q-bio.GN↗

arXiv2019

SentiCite: An Approach for Publication Sentiment Analysis

With the rapid growth in the number of scientific publications, year after year, it is becoming increasingly difficult to identify quality authoritative work on a single topic. Though there is an availability of scientometric measures which promise to offer a solution to this problem, these measures are mostly quantitative and rely, for instance, only on the number of times an article is cited. With this approach, it becomes irrelevant if an article is cited 10 times in a positive, negative or neutral way. In this context, it is quite important to study the qualitative aspect of a citation to understand its significance. This paper presents a novel system for sentiment analysis of citations in scientific documents (SentiCite) and is also capable of detecting nature of citations by targeting the motivation behind a citation, e.g., reference to a dataset, reading reference. Furthermore, the paper also presents two datasets (SentiCiteDB and IntentCiteDB) containing about 2,600 citations with their ground truth for sentiment and nature of citation. SentiCite along with other state-of-the-art methods for sentiment analysis are evaluated on the presented datasets. Evaluation results reveal that SentiCite outperforms state-of-the-art methods for sentiment analysis in scientific publications by achieving a F1-measure of 0.71.

cs.CL↗

arXiv2019

A Robust Hybrid Approach for Textual Document Classification

Text document classification is an important task for diverse natural language processing based applications. Traditional machine learning approaches mainly focused on reducing dimensionality of textual data to perform classification. This although improved the overall classification accuracy, the classifiers still faced sparsity problem due to lack of better data representation techniques. Deep learning based text document classification, on the other hand, benefitted greatly from the invention of word embeddings that have solved the sparsity problem and researchers focus mainly remained on the development of deep architectures. Deeper architectures, however, learn some redundant features that limit the performance of deep learning based solutions. In this paper, we propose a two stage text document classification methodology which combines traditional feature engineering with automatic feature engineering (using deep learning). The proposed methodology comprises a filter based feature selection (FSE) algorithm followed by a deep convolutional neural network. This methodology is evaluated on the two most commonly used public datasets, i.e., 20 Newsgroups data and BBC news data. Evaluation results reveal that the proposed methodology outperforms the state-of-the-art of both the (traditional) machine learning and deep learning based text document classification methodologies with a significant margin of 7.7% on 20 Newsgroups and 6.6% on BBC news datasets.

cs.CL↗

arXiv2019

TSXplain: Demystification of DNN Decisions for Time-Series using Natural Language and Statistical Features

Neural networks (NN) are considered as black-boxes due to the lack of explainability and transparency of their decisions. This significantly hampers their deployment in environments where explainability is essential along with the accuracy of the system. Recently, significant efforts have been made for the interpretability of these deep networks with the aim to open up the black-box. However, most of these approaches are specifically developed for visual modalities. In addition, the interpretations provided by these systems require expert knowledge and understanding for intelligibility. This indicates a vital gap between the explainability provided by the systems and the novice user. To bridge this gap, we present a novel framework i.e. Time-Series eXplanation (TSXplain) system which produces a natural language based explanation of the decision taken by a NN. It uses the extracted statistical features to describe the decision of a NN, merging the deep learning world with that of statistics. The two-level explanation provides ample description of the decision made by the network to aid an expert as well as a novice user alike. Our survey and reliability assessment test confirm that the generated explanations are meaningful and correct. We believe that generating natural language based descriptions of the network's decisions is a big step towards opening up the black-box.

cs.LG↗

arXiv2019

Probabilistic Forecasting of Sensory Data with Generative Adversarial Networks - ForGAN

Time series forecasting is one of the challenging problems for humankind. Traditional forecasting methods using mean regression models have severe shortcomings in reflecting real-world fluctuations. While new probabilistic methods rush to rescue, they fight with technical difficulties like quantile crossing or selecting a prior distribution. To meld the different strengths of these fields while avoiding their weaknesses as well as to push the boundary of the state-of-the-art, we introduce ForGAN - one step ahead probabilistic forecasting with generative adversarial networks. ForGAN utilizes the power of the conditional generative adversarial network to learn the data generating distribution and compute probabilistic forecasts from it. We argue how to evaluate ForGAN in opposition to regression methods. To investigate probabilistic forecasting of ForGAN, we create a new dataset and demonstrate our method abilities on it. This dataset will be made publicly available for comparison. Furthermore, we test ForGAN on two publicly available datasets, namely Mackey-Glass dataset and Internet traffic dataset (A5M) where the impressive performance of ForGAN demonstrate its high capability in forecasting future values.

cs.LG↗

arXiv2019

KINN: Incorporating Expert Knowledge in Neural Networks

The promise of ANNs to automatically discover and extract useful features/patterns from data without dwelling on domain expertise although seems highly promising but comes at the cost of high reliance on large amount of accurately labeled data, which is often hard to acquire and formulate especially in time-series domains like anomaly detection, natural disaster management, predictive maintenance and healthcare. As these networks completely rely on data and ignore a very important modality i.e. expert, they are unable to harvest any benefit from the expert knowledge, which in many cases is very useful. In this paper, we try to bridge the gap between these data driven and expert knowledge based systems by introducing a novel framework for incorporating expert knowledge into the network (KINN). Integrating expert knowledge into the network has three key advantages: (a) Reduction in the amount of data needed to train the model, (b) provision of a lower bound on the performance of the resulting classifier by obtaining the best of both worlds, and (c) improved convergence of model parameters (model converges in smaller number of epochs). Although experts are extremely good in solving different tasks, there are some trends and patterns, which are usually hidden only in the data. Therefore, KINN employs a novel residual knowledge incorporation scheme, which can automatically determine the quality of the predictions made by the expert and rectify it accordingly by learning the trends/patterns from data. Specifically, the method tries to use information contained in one modality to complement information missed by the other. We evaluated KINN on a real world traffic flow prediction problem. KINN significantly superseded performance of both the expert and as well as the base network (LSTM in this case) when evaluated in isolation, highlighting its superiority for the task.

cs.LG↗

arXiv2018

Attributes' Importance for Zero-Shot Pose-Classification Based on Wearable Sensors

This paper presents a simple yet effective method for improving the performance of zero-shot learning (ZSL). ZSL classifies instances of unseen classes, from which no training data is available, by utilizing the attributes of the classes. Conventional ZSL methods have equally dealt with all the available attributes, but this sometimes causes misclassification. This is because an attribute that is effective for classifying instances of one class is not always effective for another class. In this case, a metric of classifying the latter class can be undesirably influenced by the irrelevant attribute. This paper solves this problem by taking the importance of each attribute for each class into account when calculating the metric. In addition to the proposal of this new method, this paper also contributes by providing a dataset for pose classification based on wearable sensors, named HDPoseDS. It contains 22 classes of poses performed by 10 subjects with 31 IMU sensors across full body. To the best of our knowledge, it is the richest wearable-sensor dataset especially in terms of sensor density, and thus it is suitable for studying zero-shot pose/action recognition. The presented method was evaluated on HDPoseDS and outperformed relative improvement of 5.9% in comparison to the best baseline method.

cs.CV↗

arXiv2017

Judging a Book By its Cover

Book covers communicate information to potential readers, but can that same information be learned by computers? We propose using a deep Convolutional Neural Network (CNN) to predict the genre of a book based on the visual clues provided by its cover. The purpose of this research is to investigate whether relationships between books and their covers can be learned. However, determining the genre of a book is a difficult task because covers can be ambiguous and genres can be overarching. Despite this, we show that a CNN can extract features and learn underlying design rules set by the designer to define a genre. Using machine learning, we can bring the large amount of resources available to the book cover design process. In addition, we present a new challenging dataset that can be used for many pattern recognition tasks.

cs.CV↗

arXiv2017

AirScript - Creating Documents in Air

This paper presents a novel approach, called AirScript, for creating, recognizing and visualizing documents in air. We present a novel algorithm, called 2-DifViz, that converts the hand movements in air (captured by a Myo-armband worn by a user) into a sequence of x, y coordinates on a 2D Cartesian plane, and visualizes them on a canvas. Existing sensor-based approaches either do not provide visual feedback or represent the recognized characters using prefixed templates. In contrast, AirScript stands out by giving freedom of movement to the user, as well as by providing a real-time visual feedback of the written characters, making the interaction natural. AirScript provides a recognition module to predict the content of the document created in air. To do so, we present a novel approach based on deep learning, which uses the sensor data and the visualizations created by 2-DifViz. The recognition module consists of a Convolutional Neural Network (CNN) and two Gated Recurrent Unit (GRU) Networks. The output from these three networks is fused to get the final prediction about the characters written in air. AirScript can be used in highly sophisticated environments like a smart classroom, a smart factory or a smart laboratory, where it would enable people to annotate pieces of texts wherever they want without any reference surface. We have evaluated AirScript against various well-known learning models (HMM, KNN, SVM, etc.) on the data of 12 participants. Evaluation results show that the recognition module of AirScript largely outperforms all of these models by achieving an accuracy of 91.7% in a person independent evaluation and a 96.7% accuracy in a person dependent evaluation.

cs.HC↗

arXiv2017

Cutting the Error by Half: Investigation of Very Deep CNN and Advanced Training Strategies for Document Image Classification

We present an exhaustive investigation of recent Deep Learning architectures, algorithms, and strategies for the task of document image classification to finally reduce the error by more than half. Existing approaches, such as the DeepDocClassifier, apply standard Convolutional Network architectures with transfer learning from the object recognition domain. The contribution of the paper is threefold: First, it investigates recently introduced very deep neural network architectures (GoogLeNet, VGG, ResNet) using transfer learning (from real images). Second, it proposes transfer learning from a huge set of document images, i.e. 400,000 documents. Third, it analyzes the impact of the amount of training data (document images) and other parameters to the classification abilities. We use two datasets, the Tobacco-3482 and the large-scale RVL-CDIP dataset. We achieve an accuracy of 91.13% for the Tobacco-3482 dataset while earlier approaches reach only 77.6%. Thus, a relative error reduction of more than 60% is achieved. For the large dataset RVL-CDIP, an accuracy of 90.97% is achieved, corresponding to a relative error reduction of 11.5%.

cs.CV↗

arXiv2017

TAC-GAN - Text Conditioned Auxiliary Classifier Generative Adversarial Network

In this work, we present the Text Conditioned Auxiliary Classifier Generative Adversarial Network, (TAC-GAN) a text to image Generative Adversarial Network (GAN) for synthesizing images from their text descriptions. Former approaches have tried to condition the generative process on the textual data; but allying it to the usage of class information, known to diversify the generated samples and improve their structural coherence, has not been explored. We trained the presented TAC-GAN model on the Oxford-102 dataset of flowers, and evaluated the discriminability of the generated images with Inception-Score, as well as their diversity using the Multi-Scale Structural Similarity Index (MS-SSIM). Our approach outperforms the state-of-the-art models, i.e., its inception score is 3.45, corresponding to a relative increase of 7.8% compared to the recently introduced StackGan. A comparison of the mean MS-SSIM scores of the training and generated samples per class shows that our approach is able to generate highly diverse images with an average MS-SSIM of 0.14 over all generated classes.

cs.CV↗

arXiv2016

A Novel Approach for Data-Driven Automatic Site Recommendation and Selection

This paper presents a novel, generic, and automatic method for data-driven site selection. Site selection is one of the most crucial and important decisions made by any company. Such a decision depends on various factors of sites, including socio-economic, geographical, ecological, as well as specific requirements of companies. The existing approaches for site selection (commonly used by economists) are manual, subjective, and not scalable, especially to Big Data. The presented method for site selection is robust, efficient, scalable, and is capable of handling challenges emerging in Big Data. To assess the effectiveness of the presented method, it is evaluated on real data (collected from Federal Statistical Office of Germany) of around 200 influencing factors which are considered by economists for site selection of Supermarkets in Germany (Lidl, EDEKA, and NP). Evaluation results show that there is a big overlap (86.4 \%) between the sites of existing supermarkets and the sites recommended by the presented method. In addition, the method also recommends many sites (328) for supermarket where a store should be opened.

cs.AI↗

arXiv2016

A Generic Method for Automatic Ground Truth Generation of Camera-captured Documents

The contribution of this paper is fourfold. The first contribution is a novel, generic method for automatic ground truth generation of camera-captured document images (books, magazines, articles, invoices, etc.). It enables us to build large-scale (i.e., millions of images) labeled camera-captured/scanned documents datasets, without any human intervention. The method is generic, language independent and can be used for generation of labeled documents datasets (both scanned and cameracaptured) in any cursive and non-cursive language, e.g., English, Russian, Arabic, Urdu, etc. To assess the effectiveness of the presented method, two different datasets in English and Russian are generated using the presented method. Evaluation of samples from the two datasets shows that 99:98% of the images were correctly labeled. The second contribution is a large dataset (called C3Wi) of camera-captured characters and words images, comprising 1 million word images (10 million character images), captured in a real camera-based acquisition. This dataset can be used for training as well as testing of character recognition systems on camera-captured documents. The third contribution is a novel method for the recognition of cameracaptured document images. The proposed method is based on Long Short-Term Memory and outperforms the state-of-the-art methods for camera based OCRs. As a fourth contribution, various benchmark tests are performed to uncover the behavior of commercial (ABBYY), open source (Tesseract), and the presented camera-based OCR using the presented C3Wi dataset. Evaluation results reveal that the existing OCRs, which already get very high accuracies on scanned documents, have limited performance on camera-captured document images; where ABBYY has an accuracy of 75%, Tesseract an accuracy of 50.22%, while the presented character recognition system has an accuracy of 95.10%.

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