arXiv subjects

Shuo Chen

Publications and source records attributed to Shuo Chen.

At least 127 records · Page 7Linked to original sources

arXiv2024

Residual spectrum: Brain functional connectivity detection beyond coherence

Coherence is a widely used measure to assess linear relationships between time series. However, it fails to capture nonlinear dependencies. To overcome this limitation, this paper introduces the notion of residual spectral density as a higher-order extension of the squared coherence. The method is based on an orthogonal decomposition of time series regression models. We propose a test for the existence of the residual spectrum and derive its fundamental properties. A numerical study illustrates finite sample performance of the proposed method. An application of the method shows that the residual spectrum can effectively detect brain connectivity. Our study reveals a noteworthy contrast in connectivity patterns between schizophrenia patients and healthy individuals. Specifically, we observed that non-linear connectivity in schizophrenia patients surpasses that of healthy individuals, which stands in stark contrast to the established understanding that linear connectivity tends to be higher in healthy individuals. This finding sheds new light on the intricate dynamics of brain connectivity in schizophrenia.

math.ST↗

arXiv2024

Beyond the Edge: An Advanced Exploration of Reinforcement Learning for Mobile Edge Computing, its Applications, and Future Research Trajectories

Mobile Edge Computing (MEC) broadens the scope of computation and storage beyond the central network, incorporating edge nodes close to end devices. This expansion facilitates the implementation of large-scale "connected things" within edge networks. The advent of applications necessitating real-time, high-quality service presents several challenges, such as low latency, high data rate, reliability, efficiency, and security, all of which demand resolution. The incorporation of reinforcement learning (RL) methodologies within MEC networks promotes a deeper understanding of mobile user behaviors and network dynamics, thereby optimizing resource use in computing and communication processes. This paper offers an exhaustive survey of RL applications in MEC networks, initially presenting an overview of RL from its fundamental principles to the latest advanced frameworks. Furthermore, it outlines various RL strategies employed in offloading, caching, and communication within MEC networks. Finally, it explores open issues linked with software and hardware platforms, representation, RL robustness, safe RL, large-scale scheduling, generalization, security, and privacy. The paper proposes specific RL techniques to mitigate these issues and provides insights into their practical applications.

cs.NI↗

arXiv2024

Modeling Interconnected Modules in Multivariate Outcomes: Evaluating the Impact of Alcohol Intake on Plasma Metabolomics

Alcohol consumption has been shown to influence cardiovascular mechanisms in humans, leading to observable alterations in the plasma metabolomic profile. Regression models are commonly employed to investigate these effects, treating metabolomics features as the outcomes and alcohol intake as the exposure. Given the latent dependence structure among the numerous metabolomic features (e.g., co-expression networks with interconnected modules), modeling this structure is crucial for accurately identifying metabolomic features associated with alcohol intake. However, integrating dependence structures into regression models remains difficult in both estimation and inference procedures due to their large or high dimensionality. To bridge this gap, we propose an innovative multivariate regression model that accounts for correlations among outcome features by incorporating an interconnected community structure. Furthermore, we derive closed-form and likelihood-based estimators, accompanied by explicit exact and explicit asymptotic covariance matrix estimators, respectively. Simulation analysis demonstrates that our approach provides accurate estimation of both dependence and regression coefficients, and enhances sensitivity while maintaining a well-controlled discovery rate, as evidenced through benchmarking against existing regression models. Finally, we apply our approach to assess the impact of alcohol intake on $249$ metabolomic biomarkers measured using nuclear magnetic resonance spectroscopy. The results indicate that alcohol intake can elevate high-density lipoprotein levels by enhancing the transport rate of Apolipoproteins A1.

stat.ME↗

arXiv2024

The Devil Behind the Mirror: Tracking the Campaigns of Cryptocurrency Abuses on the Dark Web

The dark web has emerged as the state-of-the-art solution for enhanced anonymity. Just like a double-edged sword, it also inadvertently becomes the safety net and breeding ground for illicit activities. Among them, cryptocurrencies have been prevalently abused to receive illicit income while evading regulations. Despite the continuing efforts to combat illicit activities, there is still a lack of an in-depth understanding regarding the characteristics and dynamics of cryptocurrency abuses on the dark web. In this work, we conduct a multi-dimensional and systematic study to track cryptocurrency-related illicit activities and campaigns on the dark web. We first harvest a dataset of 4,923 cryptocurrency-related onion sites with over 130K pages. Then, we detect and extract the illicit blockchain transactions to characterize the cryptocurrency abuses, targeting features from single/clustered addresses and illicit campaigns. Throughout our study, we have identified 2,564 illicit sites with 1,189 illicit blockchain addresses, which account for 90.8 BTC in revenue. Based on their inner connections, we further identify 66 campaigns behind them. Our exploration suggests that illicit activities on the dark web have strong correlations, which can guide us to identify new illicit blockchain addresses and onions, and raise alarms at the early stage of their deployment.

cs.CR↗

arXiv2024

3MOS: Multi-sources, Multi-resolutions, and Multi-scenes dataset for Optical-SAR image matching

Optical-SAR image matching is a fundamental task for image fusion and visual navigation. However, all large-scale open SAR dataset for methods development are collected from single platform, resulting in limited satellite types and spatial resolutions. Since images captured by different sensors vary significantly in both geometric and radiometric appearance, existing methods may fail to match corresponding regions containing the same content. Besides, most of existing datasets have not been categorized based on the characteristics of different scenes. To encourage the design of more general multi-modal image matching methods, we introduce a large-scale Multi-sources,Multi-resolutions, and Multi-scenes dataset for Optical-SAR image matching(3MOS). It consists of 155K optical-SAR image pairs, including SAR data from six commercial satellites, with resolutions ranging from 1.25m to 12.5m. The data has been classified into eight scenes including urban, rural, plains, hills, mountains, water, desert, and frozen earth. Extensively experiments show that none of state-of-the-art methods achieve consistently superior performance across different sources, resolutions and scenes. In addition, the distribution of data has a substantial impact on the matching capability of deep learning models, this proposes the domain adaptation challenge in optical-SAR image matching. Our data and code will be available at:https://github.com/3M-OS/3MOS.

cs.CV↗

arXiv2024

Decision-making with Speculative Opponent Models

Opponent modelling has proven effective in enhancing the decision-making of the controlled agent by constructing models of opponent agents. However, existing methods often rely on access to the observations and actions of opponents, a requirement that is infeasible when such information is either unobservable or challenging to obtain. To address this issue, we introduce Distributional Opponent-aided Multi-agent Actor-Critic (DOMAC), the first speculative opponent modelling algorithm that relies solely on local information (i.e., the controlled agent's observations, actions, and rewards). Specifically, the actor maintains a speculated belief about the opponents using the tailored speculative opponent models that predict the opponents' actions using only local information. Moreover, DOMAC features distributional critic models that estimate the return distribution of the actor's policy, yielding a more fine-grained assessment of the actor's quality. This thus more effectively guides the training of the speculative opponent models that the actor depends upon. Furthermore, we formally derive a policy gradient theorem with the proposed opponent models. Extensive experiments under eight different challenging multi-agent benchmark tasks within the MPE, Pommerman and StarCraft Multiagent Challenge (SMAC) demonstrate that our DOMAC successfully models opponents' behaviours and delivers superior performance against state-of-the-art methods with a faster convergence speed.

cs.AI↗

arXiv2024

CivRealm: A Learning and Reasoning Odyssey in Civilization for Decision-Making Agents

The generalization of decision-making agents encompasses two fundamental elements: learning from past experiences and reasoning in novel contexts. However, the predominant emphasis in most interactive environments is on learning, often at the expense of complexity in reasoning. In this paper, we introduce CivRealm, an environment inspired by the Civilization game. Civilization's profound alignment with human history and society necessitates sophisticated learning, while its ever-changing situations demand strong reasoning to generalize. Particularly, CivRealm sets up an imperfect-information general-sum game with a changing number of players; it presents a plethora of complex features, challenging the agent to deal with open-ended stochastic environments that require diplomacy and negotiation skills. Within CivRealm, we provide interfaces for two typical agent types: tensor-based agents that focus on learning, and language-based agents that emphasize reasoning. To catalyze further research, we present initial results for both paradigms. The canonical RL-based agents exhibit reasonable performance in mini-games, whereas both RL- and LLM-based agents struggle to make substantial progress in the full game. Overall, CivRealm stands as a unique learning and reasoning challenge for decision-making agents. The code is available at https://github.com/bigai-ai/civrealm.

cs.AI↗

arXiv2024

CRM: Single Image to 3D Textured Mesh with Convolutional Reconstruction Model

Feed-forward 3D generative models like the Large Reconstruction Model (LRM) have demonstrated exceptional generation speed. However, the transformer-based methods do not leverage the geometric priors of the triplane component in their architecture, often leading to sub-optimal quality given the limited size of 3D data and slow training. In this work, we present the Convolutional Reconstruction Model (CRM), a high-fidelity feed-forward single image-to-3D generative model. Recognizing the limitations posed by sparse 3D data, we highlight the necessity of integrating geometric priors into network design. CRM builds on the key observation that the visualization of triplane exhibits spatial correspondence of six orthographic images. First, it generates six orthographic view images from a single input image, then feeds these images into a convolutional U-Net, leveraging its strong pixel-level alignment capabilities and significant bandwidth to create a high-resolution triplane. CRM further employs Flexicubes as geometric representation, facilitating direct end-to-end optimization on textured meshes. Overall, our model delivers a high-fidelity textured mesh from an image in just 10 seconds, without any test-time optimization.

cs.CV↗

arXiv2024

Multivariate Bayesian variable selection with application to multi-trait genetic fine mapping

Variable selection has played a critical role in modern statistical learning and scientific discoveries. Numerous regularization and Bayesian variable selection methods have been developed in the past two decades for variable selection, but most of these methods consider selecting variables for only one response. As more data is being collected nowadays, it is common to analyze multiple related responses from the same study. Existing multivariate variable selection methods select variables for all responses without considering the possible heterogeneity across different responses, i.e. some features may only predict a subset of responses but not the rest. Motivated by the multi-trait fine mapping problem in genetics to identify the causal variants for multiple related traits, we developed a novel multivariate Bayesian variable selection method to select critical predictors from a large number of grouped predictors that target at multiple correlated and possibly heterogeneous responses. Our new method is featured by its selection at multiple levels, its incorporation of prior biological knowledge to guide selection and identification of best subset of responses predictors target at. We showed the advantage of our method via extensive simulations and a real fine mapping example to identify causal variants associated with different subsets of addictive behaviors.

stat.ME↗

arXiv2024

Integrative data analysis where partial covariates have complex non-linear effects by using summary information from an external data

A full parametric and linear specification may be insufficient to capture complicated patterns in studies exploring complex features, such as those investigating age-related changes in brain functional abilities. Alternatively, a partially linear model (PLM) consisting of both parametric and non-parametric elements may have a better fit. This model has been widely applied in economics, environmental science, and biomedical studies. In this paper, we introduce a novel statistical inference framework that equips PLM with high estimation efficiency by effectively synthesizing summary information from external data into the main analysis. Such an integrative scheme is versatile in assimilating various types of reduced models from the external study. The proposed method is shown to be theoretically valid and numerically convenient, and it ensures a high-efficiency gain compared to classic methods in PLM. Our method is further validated using two data applications by evaluating the risk factors of brain imaging measures and blood pressure.

stat.ME↗

arXiv2024

Higher-order accurate two-sample network inference and network hashing

Two-sample hypothesis testing for network comparison presents many significant challenges, including: leveraging repeated network observations and known node registration, but without requiring them to operate; relaxing strong structural assumptions; achieving finite-sample higher-order accuracy; handling different network sizes and sparsity levels; fast computation and memory parsimony; controlling false discovery rate (FDR) in multiple testing; and theoretical understandings, particularly regarding finite-sample accuracy and minimax optimality. In this paper, we develop a comprehensive toolbox, featuring a novel main method and its variants, all accompanied by strong theoretical guarantees, to address these challenges. Our method outperforms existing tools in speed and accuracy, and it is proved power-optimal. Our algorithms are user-friendly and versatile in handling various data structures (single or repeated network observations; known or unknown node registration). We also develop an innovative framework for offline hashing and fast querying as a very useful tool for large network databases. We showcase the effectiveness of our method through comprehensive simulations and applications to two real-world datasets, which revealed intriguing new structures.

stat.ME↗

arXiv2024

Multi-View Neural 3D Reconstruction of Micro-/Nanostructures with Atomic Force Microscopy

Atomic Force Microscopy (AFM) is a widely employed tool for micro-/nanoscale topographic imaging. However, conventional AFM scanning struggles to reconstruct complex 3D micro-/nanostructures precisely due to limitations such as incomplete sample topography capturing and tip-sample convolution artifacts. Here, we propose a multi-view neural-network-based framework with AFM (MVN-AFM), which accurately reconstructs surface models of intricate micro-/nanostructures. Unlike previous works, MVN-AFM does not depend on any specially shaped probes or costly modifications to the AFM system. To achieve this, MVN-AFM uniquely employs an iterative method to align multi-view data and eliminate AFM artifacts simultaneously. Furthermore, we pioneer the application of neural implicit surface reconstruction in nanotechnology and achieve markedly improved results. Extensive experiments show that MVN-AFM effectively eliminates artifacts present in raw AFM images and reconstructs various micro-/nanostructures including complex geometrical microstructures printed via Two-photon Lithography and nanoparticles such as PMMA nanospheres and ZIF-67 nanocrystals. This work presents a cost-effective tool for micro-/nanoscale 3D analysis.

cs.CV↗

arXiv2024

Direct Distillation between Different Domains

Knowledge Distillation (KD) aims to learn a compact student network using knowledge from a large pre-trained teacher network, where both networks are trained on data from the same distribution. However, in practical applications, the student network may be required to perform in a new scenario (i.e., the target domain), which usually exhibits significant differences from the known scenario of the teacher network (i.e., the source domain). The traditional domain adaptation techniques can be integrated with KD in a two-stage process to bridge the domain gap, but the ultimate reliability of two-stage approaches tends to be limited due to the high computational consumption and the additional errors accumulated from both stages. To solve this problem, we propose a new one-stage method dubbed ``Direct Distillation between Different Domains" (4Ds). We first design a learnable adapter based on the Fourier transform to separate the domain-invariant knowledge from the domain-specific knowledge. Then, we build a fusion-activation mechanism to transfer the valuable domain-invariant knowledge to the student network, while simultaneously encouraging the adapter within the teacher network to learn the domain-specific knowledge of the target data. As a result, the teacher network can effectively transfer categorical knowledge that aligns with the target domain of the student network. Intensive experiments on various benchmark datasets demonstrate that our proposed 4Ds method successfully produces reliable student networks and outperforms state-of-the-art approaches.

cs.LG↗

arXiv2024

MagicVideo-V2: Multi-Stage High-Aesthetic Video Generation

The growing demand for high-fidelity video generation from textual descriptions has catalyzed significant research in this field. In this work, we introduce MagicVideo-V2 that integrates the text-to-image model, video motion generator, reference image embedding module and frame interpolation module into an end-to-end video generation pipeline. Benefiting from these architecture designs, MagicVideo-V2 can generate an aesthetically pleasing, high-resolution video with remarkable fidelity and smoothness. It demonstrates superior performance over leading Text-to-Video systems such as Runway, Pika 1.0, Morph, Moon Valley and Stable Video Diffusion model via user evaluation at large scale.

cs.CV↗

arXiv2023

An Internet-wide Penetration Study on NAT Boxes via TCP/IP Side Channel

Network Address Translation (NAT) plays an essential role in shielding devices inside an internal local area network from direct malicious accesses from the public Internet. However, recent studies show the possibilities of penetrating NAT boxes in some specific circumstances. The penetrated NAT box can be exploited by attackers as a pivot to abuse the otherwise inaccessible internal network resources, leading to serious security consequences. In this paper, we aim to conduct an Internet-wide penetration testing on NAT boxes. The main difference between our study and the previous ones is that ours is based on the TCP/IP side channels. We explore the TCP/IP side channels in the research literature, and find that the shared-IPID side channel is the most suitable for NAT-penetration testing, as it satisfies the three requirements of our study: generality, ethics, and robustness. Based on this side channel, we develop an adaptive scanner that can accomplish the Internet-wide scanning in 5 days in a very non-aggressive manner. The evaluation shows that our scanner is effective in both the controlled network and the real network. Our measurement results reveal that more than 30,000 network middleboxes are potentially vulnerable to NAT penetration. They are distributed across 154 countries and 4,146 different organizations, showing that NAT-penetration poses a serious security threat.

cs.CR↗

arXiv2023

Benchmarking Robustness of Adaptation Methods on Pre-trained Vision-Language Models

Various adaptation methods, such as LoRA, prompts, and adapters, have been proposed to enhance the performance of pre-trained vision-language models in specific domains. The robustness of these adaptation methods against distribution shifts have not been studied. In this study, we assess the robustness of 11 widely-used adaptation methods across 4 vision-language datasets under multimodal corruptions. Concretely, we introduce 7 benchmark datasets, including 96 visual and 87 textual corruptions, to investigate the robustness of different adaptation methods, the impact of available adaptation examples, and the influence of trainable parameter size during adaptation. Our analysis reveals that: 1) Adaptation methods are more sensitive to text corruptions than visual corruptions. 2) Full fine-tuning does not consistently provide the highest robustness; instead, adapters can achieve better robustness with comparable clean performance. 3) Contrary to expectations, our findings indicate that increasing the number of adaptation data and parameters does not guarantee enhanced robustness; instead it results in even lower robustness. We hope this study could benefit future research in the development of robust multimodal adaptation methods. The benchmark, code, and dataset used in this study can be accessed at https://adarobustness.github.io .

cs.CV↗

arXiv2023

Neural Architecture Search for Compressed Sensing Magnetic Resonance Image Reconstruction

Recent works have demonstrated that deep learning (DL) based compressed sensing (CS) implementation can accelerate Magnetic Resonance (MR) Imaging by reconstructing MR images from sub-sampled k-space data. However, network architectures adopted in previous methods are all designed by handcraft. Neural Architecture Search (NAS) algorithms can automatically build neural network architectures which have outperformed human designed ones in several vision tasks. Inspired by this, here we proposed a novel and efficient network for the MR image reconstruction problem via NAS instead of manual attempts. Particularly, a specific cell structure, which was integrated into the model-driven MR reconstruction pipeline, was automatically searched from a flexible pre-defined operation search space in a differentiable manner. Experimental results show that our searched network can produce better reconstruction results compared to previous state-of-the-art methods in terms of PSNR and SSIM with 4-6 times fewer computation resources. Extensive experiments were conducted to analyze how hyper-parameters affect reconstruction performance and the searched structures. The generalizability of the searched architecture was also evaluated on different organ MR datasets. Our proposed method can reach a better trade-off between computation cost and reconstruction performance for MR reconstruction problem with good generalizability and offer insights to design neural networks for other medical image applications. The evaluation code will be available at https://github.com/yjump/NAS-for-CSMRI.

eess.IV↗

arXiv2023

Multiple Imputation Method for High-Dimensional Neuroimaging Data

Missingness is a common issue for neuroimaging data, and neglecting it in downstream statistical analysis can introduce bias and lead to misguided inferential conclusions. It is therefore crucial to conduct appropriate statistical methods to address this issue. While multiple imputation is a popular technique for handling missing data, its application to neuroimaging data is hindered by high dimensionality and complex dependence structures of multivariate neuroimaging variables. To tackle this challenge, we propose a novel approach, named High Dimensional Multiple Imputation (HIMA), based on Bayesian models. HIMA develops a new computational strategy for sampling large covariance matrices based on a robustly estimated posterior mode, which drastically enhances computational efficiency and numerical stability. To assess the effectiveness of HIMA, we conducted extensive simulation studies and real-data analysis using neuroimaging data from a Schizophrenia study. HIMA showcases a computational efficiency improvement of over 2000 times when compared to traditional approaches, while also producing imputed datasets with improved precision and stability.

stat.ME↗