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Shuo Chen

Publications and source records attributed to Shuo Chen.

At least 145 records · Page 8Linked to original sources
arXiv2023

Evaluating the effects of high-throughput structural neuroimaging predictors on whole-brain functional connectome outcomes via network-based vector-on-matrix regression

The joint analysis of multimodal neuroimaging data is critical in the field of brain research because it reveals complex interactive relationships between neurobiological structures and functions. In this study, we focus on investigating the effects of structural imaging (SI) features, including white matter micro-structure integrity (WMMI) and cortical thickness, on the whole brain functional connectome (FC) network. To achieve this goal, we propose a network-based vector-on-matrix regression model to characterize the FC-SI association patterns. We have developed a novel multi-level dense bipartite and clique subgraph extraction method to identify which subsets of spatially specific SI features intensively influence organized FC sub-networks. The proposed method can simultaneously identify highly correlated structural-connectomic association patterns and suppress false positive findings while handling millions of potential interactions. We apply our method to a multimodal neuroimaging dataset of 4,242 participants from the UK Biobank to evaluate the effects of whole-brain WMMI and cortical thickness on the resting-state FC. The results reveal that the WMMI on corticospinal tracts and inferior cerebellar peduncle significantly affect functional connections of sensorimotor, salience, and executive sub-networks with an average correlation of 0.81 (p<0.001).

stat.ME↗
arXiv2023

Avalon's Game of Thoughts: Battle Against Deception through Recursive Contemplation

Recent breakthroughs in large language models (LLMs) have brought remarkable success in the field of LLM-as-Agent. Nevertheless, a prevalent assumption is that the information processed by LLMs is consistently honest, neglecting the pervasive deceptive or misleading information in human society and AI-generated content. This oversight makes LLMs susceptible to malicious manipulations, potentially resulting in detrimental outcomes. This study utilizes the intricate Avalon game as a testbed to explore LLMs' potential in deceptive environments. Avalon, full of misinformation and requiring sophisticated logic, manifests as a "Game-of-Thoughts". Inspired by the efficacy of humans' recursive thinking and perspective-taking in the Avalon game, we introduce a novel framework, Recursive Contemplation (ReCon), to enhance LLMs' ability to identify and counteract deceptive information. ReCon combines formulation and refinement contemplation processes; formulation contemplation produces initial thoughts and speech, while refinement contemplation further polishes them. Additionally, we incorporate first-order and second-order perspective transitions into these processes respectively. Specifically, the first-order allows an LLM agent to infer others' mental states, and the second-order involves understanding how others perceive the agent's mental state. After integrating ReCon with different LLMs, extensive experiment results from the Avalon game indicate its efficacy in aiding LLMs to discern and maneuver around deceptive information without extra fine-tuning and data. Finally, we offer a possible explanation for the efficacy of ReCon and explore the current limitations of LLMs in terms of safety, reasoning, speaking style, and format, potentially furnishing insights for subsequent research.

cs.AI↗
arXiv2023

Atom-Motif Contrastive Transformer for Molecular Property Prediction

Recently, Graph Transformer (GT) models have been widely used in the task of Molecular Property Prediction (MPP) due to their high reliability in characterizing the latent relationship among graph nodes (i.e., the atoms in a molecule). However, most existing GT-based methods usually explore the basic interactions between pairwise atoms, and thus they fail to consider the important interactions among critical motifs (e.g., functional groups consisted of several atoms) of molecules. As motifs in a molecule are significant patterns that are of great importance for determining molecular properties (e.g., toxicity and solubility), overlooking motif interactions inevitably hinders the effectiveness of MPP. To address this issue, we propose a novel Atom-Motif Contrastive Transformer (AMCT), which not only explores the atom-level interactions but also considers the motif-level interactions. Since the representations of atoms and motifs for a given molecule are actually two different views of the same instance, they are naturally aligned to generate the self-supervisory signals for model training. Meanwhile, the same motif can exist in different molecules, and hence we also employ the contrastive loss to maximize the representation agreement of identical motifs across different molecules. Finally, in order to clearly identify the motifs that are critical in deciding the properties of each molecule, we further construct a property-aware attention mechanism into our learning framework. Our proposed AMCT is extensively evaluated on seven popular benchmark datasets, and both quantitative and qualitative results firmly demonstrate its effectiveness when compared with the state-of-the-art methods.

cs.LG↗
arXiv2023

IntrinsicNeRF: Learning Intrinsic Neural Radiance Fields for Editable Novel View Synthesis

Existing inverse rendering combined with neural rendering methods can only perform editable novel view synthesis on object-specific scenes, while we present intrinsic neural radiance fields, dubbed IntrinsicNeRF, which introduce intrinsic decomposition into the NeRF-based neural rendering method and can extend its application to room-scale scenes. Since intrinsic decomposition is a fundamentally under-constrained inverse problem, we propose a novel distance-aware point sampling and adaptive reflectance iterative clustering optimization method, which enables IntrinsicNeRF with traditional intrinsic decomposition constraints to be trained in an unsupervised manner, resulting in multi-view consistent intrinsic decomposition results. To cope with the problem that different adjacent instances of similar reflectance in a scene are incorrectly clustered together, we further propose a hierarchical clustering method with coarse-to-fine optimization to obtain a fast hierarchical indexing representation. It supports compelling real-time augmented applications such as recoloring and illumination variation. Extensive experiments and editing samples on both object-specific/room-scale scenes and synthetic/real-word data demonstrate that we can obtain consistent intrinsic decomposition results and high-fidelity novel view synthesis even for challenging sequences.

cs.CV↗
arXiv2023

Creative Birds: Self-Supervised Single-View 3D Style Transfer

In this paper, we propose a novel method for single-view 3D style transfer that generates a unique 3D object with both shape and texture transfer. Our focus lies primarily on birds, a popular subject in 3D reconstruction, for which no existing single-view 3D transfer methods have been developed.The method we propose seeks to generate a 3D mesh shape and texture of a bird from two single-view images. To achieve this, we introduce a novel shape transfer generator that comprises a dual residual gated network (DRGNet), and a multi-layer perceptron (MLP). DRGNet extracts the features of source and target images using a shared coordinate gate unit, while the MLP generates spatial coordinates for building a 3D mesh. We also introduce a semantic UV texture transfer module that implements textural style transfer using semantic UV segmentation, which ensures consistency in the semantic meaning of the transferred regions. This module can be widely adapted to many existing approaches. Finally, our method constructs a novel 3D bird using a differentiable renderer. Experimental results on the CUB dataset verify that our method achieves state-of-the-art performance on the single-view 3D style transfer task. Code is available in https://github.com/wrk226/creative_birds.

cs.CV↗
arXiv2023

A Systematic Survey of Prompt Engineering on Vision-Language Foundation Models

Prompt engineering is a technique that involves augmenting a large pre-trained model with task-specific hints, known as prompts, to adapt the model to new tasks. Prompts can be created manually as natural language instructions or generated automatically as either natural language instructions or vector representations. Prompt engineering enables the ability to perform predictions based solely on prompts without updating model parameters, and the easier application of large pre-trained models in real-world tasks. In past years, Prompt engineering has been well-studied in natural language processing. Recently, it has also been intensively studied in vision-language modeling. However, there is currently a lack of a systematic overview of prompt engineering on pre-trained vision-language models. This paper aims to provide a comprehensive survey of cutting-edge research in prompt engineering on three types of vision-language models: multimodal-to-text generation models (e.g. Flamingo), image-text matching models (e.g. CLIP), and text-to-image generation models (e.g. Stable Diffusion). For each type of model, a brief model summary, prompting methods, prompting-based applications, and the corresponding responsibility and integrity issues are summarized and discussed. Furthermore, the commonalities and differences between prompting on vision-language models, language models, and vision models are also discussed. The challenges, future directions, and research opportunities are summarized to foster future research on this topic.

cs.CV↗
arXiv2023

Distribution Shift Matters for Knowledge Distillation with Webly Collected Images

Knowledge distillation aims to learn a lightweight student network from a pre-trained teacher network. In practice, existing knowledge distillation methods are usually infeasible when the original training data is unavailable due to some privacy issues and data management considerations. Therefore, data-free knowledge distillation approaches proposed to collect training instances from the Internet. However, most of them have ignored the common distribution shift between the instances from original training data and webly collected data, affecting the reliability of the trained student network. To solve this problem, we propose a novel method dubbed ``Knowledge Distillation between Different Distributions" (KD$^{3}$), which consists of three components. Specifically, we first dynamically select useful training instances from the webly collected data according to the combined predictions of teacher network and student network. Subsequently, we align both the weighted features and classifier parameters of the two networks for knowledge memorization. Meanwhile, we also build a new contrastive learning block called MixDistribution to generate perturbed data with a new distribution for instance alignment, so that the student network can further learn a distribution-invariant representation. Intensive experiments on various benchmark datasets demonstrate that our proposed KD$^{3}$ can outperform the state-of-the-art data-free knowledge distillation approaches.

cs.CV↗
arXiv2023

ForecastTKGQuestions: A Benchmark for Temporal Question Answering and Forecasting over Temporal Knowledge Graphs

Question answering over temporal knowledge graphs (TKGQA) has recently found increasing interest. TKGQA requires temporal reasoning techniques to extract the relevant information from temporal knowledge bases. The only existing TKGQA dataset, i.e., CronQuestions, consists of temporal questions based on the facts from a fixed time period, where a temporal knowledge graph (TKG) spanning the same period can be fully used for answer inference, allowing the TKGQA models to use even the future knowledge to answer the questions based on the past facts. In real-world scenarios, however, it is also common that given the knowledge until now, we wish the TKGQA systems to answer the questions asking about the future. As humans constantly seek plans for the future, building TKGQA systems for answering such forecasting questions is important. Nevertheless, this has still been unexplored in previous research. In this paper, we propose a novel task: forecasting question answering over temporal knowledge graphs. We also propose a large-scale TKGQA benchmark dataset, i.e., ForecastTKGQuestions, for this task. It includes three types of questions, i.e., entity prediction, yes-no, and fact reasoning questions. For every forecasting question in our dataset, QA models can only have access to the TKG information before the timestamp annotated in the given question for answer inference. We find that the state-of-the-art TKGQA methods perform poorly on forecasting questions, and they are unable to answer yes-no questions and fact reasoning questions. To this end, we propose ForecastTKGQA, a TKGQA model that employs a TKG forecasting module for future inference, to answer all three types of questions. Experimental results show that ForecastTKGQA outperforms recent TKGQA methods on the entity prediction questions, and it also shows great effectiveness in answering the other two types of questions.

cs.AI↗
arXiv2023

Minimizing Age of Information for Mobile Edge Computing Systems: A Nested Index Approach

Exploiting the computational heterogeneity of mobile devices and edge nodes, mobile edge computation (MEC) provides an efficient approach to achieving real-time applications that are sensitive to information freshness, by offloading tasks from mobile devices to edge nodes. We use the metric Age-of-Information (AoI) to evaluate information freshness. An efficient solution to minimize the AoI for the MEC system with multiple users is non-trivial to obtain due to the random computing time. In this paper, we consider multiple users offloading tasks to heterogeneous edge servers in a MEC system. We first reformulate the problem as a Restless Multi-Arm-Bandit (RMAB) problem and establish a hierarchical Markov Decision Process (MDP) to characterize the updating of AoI for the MEC system. Based on the hierarchical MDP, we propose a nested index framework and design a nested index policy with provably asymptotic optimality. Finally, the closed form of the nested index is obtained, which enables the performance tradeoffs between computation complexity and accuracy. Our algorithm leads to an optimality gap reduction of up to 40%, compared to benchmarks. Our algorithm asymptotically approximates the lower bound as the system scalar gets large enough.

cs.AI↗
arXiv2023

Multi-Label Meta Weighting for Long-Tailed Dynamic Scene Graph Generation

This paper investigates the problem of scene graph generation in videos with the aim of capturing semantic relations between subjects and objects in the form of $\langle$subject, predicate, object$\rangle$ triplets. Recognizing the predicate between subject and object pairs is imbalanced and multi-label in nature, ranging from ubiquitous interactions such as spatial relationships (\eg \emph{in front of}) to rare interactions such as \emph{twisting}. In widely-used benchmarks such as Action Genome and VidOR, the imbalance ratio between the most and least frequent predicates reaches 3,218 and 3,408, respectively, surpassing even benchmarks specifically designed for long-tailed recognition. Due to the long-tailed distributions and label co-occurrences, recent state-of-the-art methods predominantly focus on the most frequently occurring predicate classes, ignoring those in the long tail. In this paper, we analyze the limitations of current approaches for scene graph generation in videos and identify a one-to-one correspondence between predicate frequency and recall performance. To make the step towards unbiased scene graph generation in videos, we introduce a multi-label meta-learning framework to deal with the biased predicate distribution. Our meta-learning framework learns a meta-weight network for each training sample over all possible label losses. We evaluate our approach on the Action Genome and VidOR benchmarks by building upon two current state-of-the-art methods for each benchmark. The experiments demonstrate that the multi-label meta-weight network improves the performance for predicates in the long tail without compromising performance for head classes, resulting in better overall performance and favorable generalizability. Code: \url{https://github.com/shanshuo/ML-MWN}.

cs.CV↗
arXiv2023

Network method for voxel-pair-level brain connectivity analysis under spatial-contiguity constraints

Brain connectome analysis commonly compresses high-resolution brain scans (typically composed of millions of voxels) down to only hundreds of regions of interest (ROIs) by averaging within-ROI signals. This huge dimension reduction improves computational speed and the morphological properties of anatomical structures; however, it also comes at the cost of substantial losses in spatial specificity and sensitivity, especially when the signals exhibit high within-ROI heterogeneity. Oftentimes, abnormally expressed functional connectivity (FC) between a pair of ROIs caused by a brain disease is primarily driven by only small subsets of voxel pairs within the ROI pair. This article proposes a new network method for detection of voxel-pair-level neural dysconnectivity with spatial constraints. Specifically, focusing on an ROI pair, our model aims to extract dense sub-areas that contain aberrant voxel-pair connections while ensuring that the involved voxels are spatially contiguous. In addition, we develop sub-community-detection algorithms to realize the model, and the consistency of these algorithms is justified. Comprehensive simulation studies demonstrate our method's effectiveness in reducing the false-positive rate while increasing statistical power, detection replicability, and spatial specificity. We apply our approach to reveal: (i) voxel-wise schizophrenia-altered FC patterns within the salience and temporal-thalamic network from 330 participants in a schizophrenia study; (ii) disrupted voxel-wise FC patterns related to nicotine addiction between the basal ganglia, hippocampus, and insular gyrus from 3269 participants using UK Biobank data. The detected results align with previous medical findings but include improved localized information.

stat.ME↗
arXiv2023

On Underdamped Nesterov's Acceleration

The high-resolution differential equation framework has been proven to be tailor-made for Nesterov's accelerated gradient descent method~(\texttt{NAG}) and its proximal correspondence -- the class of faster iterative shrinkage thresholding algorithms (FISTA). However, the systems of theories is not still complete, since the underdamped case ($r < 2$) has not been included. In this paper, based on the high-resolution differential equation framework, we construct the new Lyapunov functions for the underdamped case, which is motivated by the power of the time $t^γ$ or the iteration $k^γ$ in the mixed term. When the momentum parameter $r$ is $2$, the new Lyapunov functions are identical to the previous ones. These new proofs do not only include the convergence rate of the objective value previously obtained according to the low-resolution differential equation framework but also characterize the convergence rate of the minimal gradient norm square. All the convergence rates obtained for the underdamped case are continuously dependent on the parameter $r$. In addition, it is observed that the high-resolution differential equation approximately simulates the convergence behavior of~\texttt{NAG} for the critical case $r=-1$, while the low-resolution differential equation degenerates to the conservative Newton's equation. The high-resolution differential equation framework also theoretically characterizes the convergence rates, which are consistent with that obtained for the underdamped case with $r=-1$.

math.OC↗
arXiv2023

An Ethereum-compatible blockchain that explicates and ensures design-level safety properties for smart contracts

Smart contracts are crucial elements of decentralized technologies, but they face significant obstacles to trustworthiness due to security bugs and trapdoors. To address the core issue, we propose a technology that enables programmers to focus on design-level properties rather than specific low-level attack patterns. Our proposed technology, called Theorem-Carrying-Transaction (TCT), combines the benefits of runtime checking and symbolic proof. Under the TCT protocol, every transaction must carry a theorem that proves its adherence to the safety properties in the invoked contracts, and the blockchain checks the proof before executing the transaction. The unique design of TCT ensures that the theorems are provable and checkable in an efficient manner. We believe that TCT holds a great promise for enabling provably secure smart contracts in the future. As such, we call for collaboration toward this vision.

cs.CR↗
arXiv2023

PVO: Panoptic Visual Odometry

We present PVO, a novel panoptic visual odometry framework to achieve more comprehensive modeling of the scene motion, geometry, and panoptic segmentation information. Our PVO models visual odometry (VO) and video panoptic segmentation (VPS) in a unified view, which makes the two tasks mutually beneficial. Specifically, we introduce a panoptic update module into the VO Module with the guidance of image panoptic segmentation. This Panoptic-Enhanced VO Module can alleviate the impact of dynamic objects in the camera pose estimation with a panoptic-aware dynamic mask. On the other hand, the VO-Enhanced VPS Module also improves the segmentation accuracy by fusing the panoptic segmentation result of the current frame on the fly to the adjacent frames, using geometric information such as camera pose, depth, and optical flow obtained from the VO Module. These two modules contribute to each other through recurrent iterative optimization. Extensive experiments demonstrate that PVO outperforms state-of-the-art methods in both visual odometry and video panoptic segmentation tasks.

cs.CV↗
arXiv2023

An Efficient Data Integration Scheme for Synthesizing Information from Multiple Secondary Datasets for the Parameter Inference of the Main Analysis

Many observational studies and clinical trials collect various secondary outcomes that may be highly correlated with the primary endpoint. These secondary outcomes are often analyzed in secondary analyses separately from the main data analysis. However, these secondary outcomes can be used to improve the estimation precision in the main analysis. We propose a method called Multiple Information Borrowing (MinBo) that borrows information from secondary data (containing secondary outcomes and covariates) to improve the efficiency of the main analysis. The proposed method is robust against model misspecification of the secondary data. Both theoretical and case studies demonstrate that MinBo outperforms existing methods in terms of efficiency gain. We apply MinBo to data from the Atherosclerosis Risk in Communities study to assess risk factors for hypertension.

stat.ME↗
arXiv2022

Multi-Agent Deep Reinforcement Learning Based Resource Management in SWIPT Enabled Cellular Networks with H2H/M2M Co-Existence

Machine-to-Machine (M2M) communication is crucial in developing Internet of Things (IoT). As it is well known that cellular networks have been considered as the primary infrastructure for M2M communications, there are several key issues to be addressed in order to deploy M2M communications over cellular networks. Notably, the rapid growth of M2M traffic dramatically increases energy consumption, as well as degrades the performance of existing Human-to-Human (H2H) traffic. Sustainable operation technology and resource management are efficacious ways for solving these issues. In this paper, we investigate a resource management problem in cellular networks with H2H/M2M coexistence. First, considering the energy-constrained nature of machine type communication devices (MTCDs), we propose a novel network model enabled by simultaneous wireless information and power transfer (SWIPT), which empowers MTCDs with the ability to simultaneously perform energy harvesting (EH) and information decoding. Given the diverse characteristics of IoT devices, we subdivide MTCDs into critical and tolerable types, further formulating the resource management problem as an energy efficiency (EE) maximization problem under divers Quality-of-Service (QoS) constraints. Then, we develop a multi-agent deep reinforcement learning (DRL) based scheme to solve this problem. It provides optimal spectrum, transmit power and power splitting (PS) ratio allocation policies, along with efficient model training under designed behaviour-tracking based state space and common reward function. Finally, we verify that with a reasonable training mechanism, multiple M2M agents successfully work cooperatively in a distributed way, resulting in network performance that outperforms other intelligence approaches in terms of convergence speed and meeting the EE and QoS requirements.

cs.NI↗
arXiv2022

Revisiting the acceleration phenomenon via high-resolution differential equations

Nesterov's accelerated gradient descent (NAG) is one of the milestones in the history of first-order algorithms. It was not successfully uncovered until the high-resolution differential equation framework was proposed in [Shi et al., 2022] that the mechanism behind the acceleration phenomenon is due to the gradient correction term. To deepen our understanding of the high-resolution differential equation framework on the convergence rate, we continue to investigate NAG for the $μ$-strongly convex function based on the techniques of Lyapunov analysis and phase-space representation in this paper. First, we revisit the proof from the gradient-correction scheme. Similar to [Chen et al., 2022], the straightforward calculation simplifies the proof extremely and enlarges the step size to $s=1/L$ with minor modification. Meanwhile, the way of constructing Lyapunov functions is principled. Furthermore, we also investigate NAG from the implicit-velocity scheme. Due to the difference in the velocity iterates, we find that the Lyapunov function is constructed from the implicit-velocity scheme without the additional term and the calculation of iterative difference becomes simpler. Together with the optimal step size obtained, the high-resolution differential equation framework from the implicit-velocity scheme of NAG is perfect and outperforms the gradient-correction scheme.

math.OC↗
arXiv2022

Backdoor Attacks on Multiagent Collaborative Systems

Backdoor attacks on reinforcement learning implant a backdoor in a victim agent's policy. Once the victim observes the trigger signal, it will switch to the abnormal mode and fail its task. Most of the attacks assume the adversary can arbitrarily modify the victim's observations, which may not be practical. One work proposes to let one adversary agent use its actions to affect its opponent in two-agent competitive games, so that the opponent quickly fails after observing certain trigger actions. However, in multiagent collaborative systems, agents may not always be able to observe others. When and how much the adversary agent can affect others are uncertain, and we want the adversary agent to trigger others for as few times as possible. To solve this problem, we first design a novel training framework to produce auxiliary rewards that measure the extent to which the other agents'observations being affected. Then we use the auxiliary rewards to train a trigger policy which enables the adversary agent to efficiently affect the others' observations. Given these affected observations, we further train the other agents to perform abnormally. Extensive experiments demonstrate that the proposed method enables the adversary agent to lure the others into the abnormal mode with only a few actions.

cs.MA↗