arXiv subjects

Shuqi Li

Publications and source records attributed to Shuqi Li.

At least 19 recordsLinked to original sources

arXiv2026

Sketch-to-Layout: A Human-Centric Computational Agent for Constraint-Aware Synthesis of Modular Photobioreactors

Building-integrated photobioreactors (PBRs) offer a pathway for carbon-neutral architecture, yet deployment is hindered by configuration complexity and biological maintenance. This paper presents a modular PBR facade system powered by a computational framework reconciling design intent with physical validity. We introduce 'carbon-neutralization bricks' featuring integrated vessel-and-conduit geometry; monolithic fluid channels enable 'plug-and-play' assembly. To navigate the combinatorial complexity of 14 modular geometries, we develop a Computational Sketch-to-Layout Agent that formulates layout synthesis as a Constraint Satisfaction Problem (CSP). Using the CP-SAT engine, the agent treats sparse user sketches as soft priors while enforcing hard constraints like port alignment and global connectivity. This allows non-experts to synthesize fabrication-ready configurations in near real-time. Furthermore, to facilitate autonomous maintenance, we propose a weakly supervised algae health monitoring pipeline. By employing a hybrid CNN-attention backbone and a temporal ranking loss, the system quantifies biological vitality from photographs without absolute ground-truth labels. Experiments demonstrate the CSP solver achieves a 95.5% success rate on grid scales up to 15 x 15. Qualitative evaluations confirm the framework preserves design semantics while ensuring operational integrity. Long-term tests show the vision module produces health trajectories aligned with 14-day biological cycles, suggesting that integrating interactive synthesis with low-cost computer vision can democratize scalable carbon capture systems.

cs.HC↗

arXiv2025

FinRpt: Dataset, Evaluation System and LLM-based Multi-agent Framework for Equity Research Report Generation

While LLMs have shown great success in financial tasks like stock prediction and question answering, their application in fully automating Equity Research Report generation remains uncharted territory. In this paper, we formulate the Equity Research Report (ERR) Generation task for the first time. To address the data scarcity and the evaluation metrics absence, we present an open-source evaluation benchmark for ERR generation - FinRpt. We frame a Dataset Construction Pipeline that integrates 7 financial data types and produces a high-quality ERR dataset automatically, which could be used for model training and evaluation. We also introduce a comprehensive evaluation system including 11 metrics to assess the generated ERRs. Moreover, we propose a multi-agent framework specifically tailored to address this task, named FinRpt-Gen, and train several LLM-based agents on the proposed datasets using Supervised Fine-Tuning and Reinforcement Learning. Experimental results indicate the data quality and metrics effectiveness of the benchmark FinRpt and the strong performance of FinRpt-Gen, showcasing their potential to drive innovation in the ERR generation field. All code and datasets are publicly available.

cs.CL↗

arXiv2025

A Dynamic Knowledge Update-Driven Model with Large Language Models for Fake News Detection

As the Internet and social media evolve rapidly, distinguishing credible news from a vast amount of complex information poses a significant challenge. Due to the suddenness and instability of news events, the authenticity labels of news can potentially shift as events develop, making it crucial for fake news detection to obtain the latest event updates. Existing methods employ retrieval-augmented generation to fill knowledge gaps, but they suffer from issues such as insufficient credibility of retrieved content and interference from noisy information. We propose a dynamic knowledge update-driven model for fake news detection (DYNAMO), which leverages knowledge graphs to achieve continuous updating of new knowledge and integrates with large language models to fulfill dual functions: news authenticity detection and verification of new knowledge correctness, solving the two key problems of ensuring the authenticity of new knowledge and deeply mining news semantics. Specifically, we first construct a news-domain-specific knowledge graph. Then, we use Monte Carlo Tree Search to decompose complex news and verify them step by step. Finally, we extract and update new knowledge from verified real news texts and reasoning paths. Experimental results demonstrate that DYNAMO achieves the best performance on two real-world datasets.

cs.CL↗

arXiv2025

Beam test result and digitization of TaichuPix-3: A Monolithic Active Pixel Sensors for CEPC vertex detector

The Circular Electron-Positron Collider (CEPC), as the next-generation electron-positron collider, is tasked with advancing not only Higgs physics but also the discovery of new physics. Achieving these goals requires high-precision measurements of particles. Taichu seires, Monolithic Active Pixel Sensor (MAPS), a key component of the vertex detector for CEPC was designed to meet the CEPC's requirements. For the geometry of vertex detector is long barrel with no endcap, and current silicon lacks a complete digitization model, precise estimation of cluster size particularly causing by particle with large incident angle is needed. Testbeam results were conducted at the Beijing Synchrotron Radiation Facility (BSRF) to evaluate cluster size dependence on different incident angles and threshold settings. Experimental results confirmed that cluster size increases with incident angle. Simulations using the Allpix$^2$ framework replicated experimental trends at small angles but exhibited discrepancies at large angles, suggesting limitations in linear electric field assumptions and sensor thickness approximations. The results from both testbeam and simulations have provided insights into the performance of the TaichuPix chip at large incident angles, offering a crucial foundation for the establishment of a digital model and addressing the estimation of cluster size in the forward region of the long barrel. Furthermore, it offers valuable references for future iterations of TaichuPix, the development of digital models, and the simulation and estimation of the vertex detector's performance.

physics.ins-det↗

arXiv2025

SE(3)-Equivariant Ternary Complex Prediction Towards Target Protein Degradation

Targeted protein degradation (TPD) induced by small molecules has emerged as a rapidly evolving modality in drug discovery, targeting proteins traditionally considered "undruggable". Proteolysis-targeting chimeras (PROTACs) and molecular glue degraders (MGDs) are the primary small molecules that induce TPD. Both types of molecules form a ternary complex linking an E3 ligase with a target protein, a crucial step for drug discovery. While significant advances have been made in binary structure prediction for proteins and small molecules, ternary structure prediction remains challenging due to obscure interaction mechanisms and insufficient training data. Traditional methods relying on manually assigned rules perform poorly and are computationally demanding due to extensive random sampling. In this work, we introduce DeepTernary, a novel deep learning-based approach that directly predicts ternary structures in an end-to-end manner using an encoder-decoder architecture. DeepTernary leverages an SE(3)-equivariant graph neural network (GNN) with both intra-graph and ternary inter-graph attention mechanisms to capture intricate ternary interactions from our collected high-quality training dataset, TernaryDB. The proposed query-based Pocket Points Decoder extracts the 3D structure of the final binding ternary complex from learned ternary embeddings, demonstrating state-of-the-art accuracy and speed in existing PROTAC benchmarks without prior knowledge from known PROTACs. It also achieves notable accuracy on the more challenging MGD benchmark under the blind docking protocol. Remarkably, our experiments reveal that the buried surface area calculated from predicted structures correlates with experimentally obtained degradation potency-related metrics. Consequently, DeepTernary shows potential in effectively assisting and accelerating the development of TPDs for previously undruggable targets.

q-bio.BM↗

arXiv2024

Baichuan4-Finance Technical Report

Large language models (LLMs) have demonstrated strong capabilities in language understanding, generation, and reasoning, yet their potential in finance remains underexplored due to the complexity and specialization of financial knowledge. In this work, we report the development of the Baichuan4-Finance series, including a comprehensive suite of foundational Baichuan4-Finance-Base and an aligned language model Baichuan4-Finance, which are built upon Baichuan4-Turbo base model and tailored for finance domain. Firstly, we have dedicated significant effort to building a detailed pipeline for improving data quality. Moreover, in the continual pre-training phase, we propose a novel domain self-constraint training strategy, which enables Baichuan4-Finance-Base to acquire financial knowledge without losing general capabilities. After Supervised Fine-tuning and Reinforcement Learning from Human Feedback and AI Feedback, the chat model Baichuan4-Finance is able to tackle various financial certification questions and real-world scenario applications. We evaluate Baichuan4-Finance on many widely used general datasets and two holistic financial benchmarks. The evaluation results show that Baichuan4-Finance-Base surpasses almost all competitive baselines on financial tasks by significant margins without sacrificing performance on general LLM benchmarks. At the same time, Baichuan4-Finance demonstrates even more impressive performance on financial application scenarios, showcasing its potential to foster community innovation in the financial LLM field.

cs.CL↗

arXiv2024

MIN: Multi-channel Interaction Network for Drug-Target Interaction with Protein Distillation

Traditional drug discovery processes are both time-consuming and require extensive professional expertise. With the accumulation of drug-target interaction (DTI) data from experimental studies, leveraging modern machine-learning techniques to discern patterns between drugs and target proteins has become increasingly feasible. In this paper, we introduce the Multi-channel Interaction Network (MIN), a novel framework designed to predict DTIs through two primary components: a representation learning module and a multi-channel interaction module. The representation learning module features a C-Score Predictor-assisted screening mechanism, which selects critical residues to enhance prediction accuracy and reduce noise. The multi-channel interaction module incorporates a structure-agnostic channel, a structure-aware channel, and an extended-mixture channel, facilitating the identification of interaction patterns at various levels for optimal complementarity. Additionally, contrastive learning is utilized to harmonize the representations of diverse data types. Our experimental evaluations on public datasets demonstrate that MIN surpasses other strong DTI prediction methods. Furthermore, the case study reveals a high overlap between the residues selected by the C-Score Predictor and those in actual binding pockets, underscoring MIN's explainability capability. These findings affirm that MIN is not only a potent tool for DTI prediction but also offers fresh insights into the prediction of protein binding sites.

q-bio.QM↗

arXiv2024

CausalStock: Deep End-to-end Causal Discovery for News-driven Stock Movement Prediction

There are two issues in news-driven multi-stock movement prediction tasks that are not well solved in the existing works. On the one hand, "relation discovery" is a pivotal part when leveraging the price information of other stocks to achieve accurate stock movement prediction. Given that stock relations are often unidirectional, such as the "supplier-consumer" relationship, causal relations are more appropriate to capture the impact between stocks. On the other hand, there is substantial noise existing in the news data leading to extracting effective information with difficulty. With these two issues in mind, we propose a novel framework called CausalStock for news-driven multi-stock movement prediction, which discovers the temporal causal relations between stocks. We design a lag-dependent temporal causal discovery mechanism to model the temporal causal graph distribution. Then a Functional Causal Model is employed to encapsulate the discovered causal relations and predict the stock movements. Additionally, we propose a Denoised News Encoder by taking advantage of the excellent text evaluation ability of large language models (LLMs) to extract useful information from massive news data. The experiment results show that CausalStock outperforms the strong baselines for both news-driven multi-stock movement prediction and multi-stock movement prediction tasks on six real-world datasets collected from the US, China, Japan, and UK markets. Moreover, getting benefit from the causal relations, CausalStock could offer a clear prediction mechanism with good explainability.

cs.LG↗

arXiv2024

Leveraging 2D Information for Long-term Time Series Forecasting with Vanilla Transformers

Time series prediction is crucial for understanding and forecasting complex dynamics in various domains, ranging from finance and economics to climate and healthcare. Based on Transformer architecture, one approach involves encoding multiple variables from the same timestamp into a single temporal token to model global dependencies. In contrast, another approach embeds the time points of individual series into separate variate tokens. The former method faces challenges in learning variate-centric representations, while the latter risks missing essential temporal information critical for accurate forecasting. In our work, we introduce GridTST, a model that combines the benefits of two approaches using innovative multi-directional attentions based on a vanilla Transformer. We regard the input time series data as a grid, where the $x$-axis represents the time steps and the $y$-axis represents the variates. A vertical slicing of this grid combines the variates at each time step into a \textit{time token}, while a horizontal slicing embeds the individual series across all time steps into a \textit{variate token}. Correspondingly, a \textit{horizontal attention mechanism} focuses on time tokens to comprehend the correlations between data at various time steps, while a \textit{vertical}, variate-aware \textit{attention} is employed to grasp multivariate correlations. This combination enables efficient processing of information across both time and variate dimensions, thereby enhancing the model's analytical strength. % We also integrate the patch technique, segmenting time tokens into subseries-level patches, ensuring that local semantic information is retained in the embedding. The GridTST model consistently delivers state-of-the-art performance across various real-world datasets.

cs.LG↗

arXiv2024

Development of the strip LGAD detector with double-end readout for future colliders

The Low-Gain Avalanche Diode (LGAD) is a new silicon detector and holds wide application prospects in particle physics experiments due to its excellent timing resolution. The LGAD with a pixel size of 1.3 mm $\times$ 1.3 mm was used to construct a High Granularity Timing Detector (HGTD) in ATLAS experiments to solve the pile-up problem. Meanwhile, the Circular Electron Positron Collider (CEPC) also proposes detectors using the LGAD. However, pixel LGAD exhibits higher readout electronics density and cost, which somewhat limits the application of LGADs. To decrease the readout electronics density, the Institute of High Energy Physics (IHEP) of the Chinese Academy of Sciences has designed strip LGADs with larger areas. These strip LGADs are all 19 mm in length but with different widths of 1.0 mm, 0.5 mm, and 0.3 mm. This article provides a detailed introduction to the design parameters of these strip LGADs and tests their electrical characteristics, including leakage current, break-down voltage, depletion capacitance, etc. The timing resolution and signal-to-noise ratio of the three strip LGAD sensors were investigated using a beta source test system. The position resolution parallel to the strip direction was tested and analyzed for the first time using a pico-second laser test system. Tests have demonstrated that the timing resolution of strip LGADs can reach about 37.5 ps, and position resolution parallel to the strip direction is better than 1 mm.

physics.ins-det↗

arXiv2024

Beam test of a baseline vertex detector prototype for CEPC

The Circular Electron Positron Collider (CEPC) has been proposed to enable more thorough and precise measurements of the properties of Higgs, W, and Z bosons, as well as to search for new physics. In response to the stringent performance requirements of the vertex detector for the CEPC, a baseline vertex detector prototype was tested and characterized for the first time using a 6 GeV electron beam at DESY II Test Beam Line 21. The baseline vertex detector prototype is designed with a cylindrical barrel structure that contains six double-sided detector modules (ladders). Each side of the ladder includes TaichuPix-3 sensors based on Monolithic Active Pixel Sensor (MAPS) technology, a flexible printed circuit, and a carbon fiber support structure. Additionally, the readout electronics and the Data Acquisition system were also examined during this beam test. The performance of the prototype was evaluated using an electron beam that passed through six ladders in a perpendicular direction. The offline data analysis indicates a spatial resolution of about 5 um, with detection efficiency exceeding 99 % and an impact parameter resolution of about 5.1 um. These promising results from this baseline vertex detector prototype mark a significant step toward realizing the optimal vertex detector for the CEPC.

physics.ins-det↗

arXiv2024

Selecting Query-bag as Pseudo Relevance Feedback for Information-seeking Conversations

Information-seeking dialogue systems are widely used in e-commerce systems, with answers that must be tailored to fit the specific settings of the online system. Given the user query, the information-seeking dialogue systems first retrieve a subset of response candidates, then further select the best response from the candidate set through re-ranking. Current methods mainly retrieve response candidates based solely on the current query, however, incorporating similar questions could introduce more diverse content, potentially refining the representation and improving the matching process. Hence, in this paper, we proposed a Query-bag based Pseudo Relevance Feedback framework (QB-PRF), which constructs a query-bag with related queries to serve as pseudo signals to guide information-seeking conversations. Concretely, we first propose a Query-bag Selection module (QBS), which utilizes contrastive learning to train the selection of synonymous queries in an unsupervised manner by leveraging the representations learned from pre-trained VAE. Secondly, we come up with a Query-bag Fusion module (QBF) that fuses synonymous queries to enhance the semantic representation of the original query through multidimensional attention computation. We verify the effectiveness of the QB-PRF framework on two competitive pretrained backbone models, including BERT and GPT-2. Experimental results on two benchmark datasets show that our framework achieves superior performance over strong baselines.

cs.IR↗

arXiv2023

Beam test of a 180 nm CMOS Pixel Sensor for the CEPC vertex detector

The proposed Circular Electron Positron Collider (CEPC) imposes new challenges for the vertex detector in terms of pixel size and material budget. A Monolithic Active Pixel Sensor (MAPS) prototype called TaichuPix, based on a column drain readout architecture, has been developed to address the need for high spatial resolution. In order to evaluate the performance of the TaichuPix-3 chips, a beam test was carried out at DESY II TB21 in December 2022. Meanwhile, the Data Acquisition (DAQ) for a muti-plane configuration was tested during the beam test. This work presents the characterization of the TaichuPix-3 chips with two different processes, including cluster size, spatial resolution, and detection efficiency. The analysis results indicate the spatial resolution better than 5 $μm$ and the detection efficiency exceeds 99.5 % for both TaichuPix-3 chips with the two different processes.

physics.ins-det↗

arXiv2023

The Performance of AC-coupled Strip LGAD developed by IHEP

The AC-coupled Strip LGAD (Strip AC-LGAD) is a novel LGAD design that diminishes the density of readout electronics through the use of strip electrodes, enabling the simultaneous measurement of time and spatial information. The Institute of High Energy Physics has designed a long Strip AC-LGAD prototype with a strip electrode length of 5.7 mm and pitches of 150 $\mu m$, 200 $\mu m$, and 250 $\mu m$. Spatial and timing resolutions of the long Strip AC-LGAD are studied by pico-second laser test and beta source tests. The laser test demonstrates that spatial resolution improves as the pitch size decreases, with an optimal resolution achieved at 8.3 $\mu$m. Furthermore, the Beta source test yields a timing resolution of 37.6 ps.

physics.ins-det↗

arXiv2023

The performance of large-pitch AC-LGAD with different N+ dose

AC-Coupled LGAD (AC-LGAD) is a new 4D detector developed based on the Low Gain Avalanche Diode (LGAD) technology, which can accurately measure the time and spatial information of particles. The Institute of High Energy Physics (IHEP) designed a large-size AC-LGAD with a pitch of 2000~\SI{}{\micro\metre} and AC pad of 1000~\SI{}{\micro\metre}, and explored the effect of N+ layer dose on the spatial resolution and time resolution. The spatial resolution varied from 36~\SI{}{\micro\metre} to 16~\SI{}{\micro\metre} depending on N+ dose for a charge corresponding to about 12 minimum ionizing particles. The jitter component of the time resolution does not change significantly with different N+ doses, and it is about 15-17 ps measured by laser. The AC-LGAD with a low N+ dose has a large attenuation factor and better spatial resolution in the central region between pads. In these specific conditions, large signal attenuation factor and low noise level are beneficial to improve the spatial resolution of the AC-LGAD sensor.

physics.ins-det↗

arXiv2023

Characterization of the response of IHEP-IME LGAD with shallow carbon to Gamma Irradiation

Low Gain Avalanche Detectors (LGAD) for the High-Granularity Timing Detector (HGTD) are crucial in reducing pileups in the High-Luminosity Large Hadron Collider. Numerous studies have been conducted on the bulk irradiation damage of LGADs. However, few studies have been carried out on the surface irradiation damage of LGAD sensors with shallow carbon implantation. In this paper, the IHEP-IME LGADs with shallow carbon implantation were irradiated up to 2 MGy using gamma irradiation to investigate surface damage. Important characteristic parameters, including leakage currents, breakdown voltage (BV), inter-pad resistances, and capacitances, were tested before and after irradiation. The results showed that the leakage current and BV increased after irradiation, whereas overall inter-pad resistance exhibited minimal change and remained above $10^9\ Ω$ before and after irradiation. Capacitance was found to be less than 4.5 pF with a slight decrease in the gain layer depletion voltage (V$_{gl}$) after irradiation. No parameter affected by the inter-pad separation was observed before and after irradiation. All characteristic parameters meet the requirements of HGTD, and this design can be used to further optimization.

physics.ins-det↗

arXiv2023

Two-element interferometer for millimeter-wave solar flare observations

In this paper, we present the design and implementation of a two-element interferometer working in the millimeter wave band (39.5 GHz - 40 GHz) for observing solar radio emissions through nulling interference. The system is composed of two 50 cm aperture Cassegrain antennas mounted on a common equatorial mount, with a separation of 230 wavelengths. The cross-correlation of the received signals effectively cancels the quiet solar component of the large flux density (~3000 sfu) that reduces the detection limit due to atmospheric fluctuations. The system performance is obtained as follows: the noise factor of the AFE in the observation band is less than 2.1 dB, system sensitivity is approximately 12.4 K (~34 sfu) with an integration time constant of 0.1 ms (default), the frequency resolution is 153 kHz, and the dynamic range is larger than 30 dB. Through actual testing, the nulling interferometer observes a quiet sun with a low level of output fluctuations (of up to 50 sfu) and has a significantly lower radiation flux variability (of up to 190 sfu) than an equivalent single-antenna system, even under thick cloud cover. As a result, this new design can effectively improve observation sensitivity by reducing the impact of atmospheric and system fluctuations during observation.

astro-ph.IM↗

arXiv2022

Leakage current simulations of Low Gain Avalanche Diode with improved Radiation Damage Modeling

We report precise TCAD simulations of IHEP-IME-v1 Low Gain Avalanche Diode (LGAD) calibrated by secondary ion mass spectroscopy (SIMS). Our setup allows us to evaluate the leakage current, capacitance, and breakdown voltage of LGAD, which agree with measurements' results before irradiation. And we propose an improved LGAD Radiation Damage Model (LRDM) which combines local acceptor removal with global deep energy levels. The LRDM is applied to the IHEP-IME-v1 LGAD and able to predict the leakage current well at -30 $^{\circ}$C after an irradiation fluence of $ Φ_{eq}=2.5 \times 10^{15} ~n_{eq}/cm^{2}$. The charge collection efficiency (CCE) is under development.

physics.ins-det↗