arXiv subjects

Stephen Kobourov

Publications and source records attributed to Stephen Kobourov.

At least 91 records · Page 5Linked to original sources

arXiv2017

Revisited Experimental Comparison of Node-Link and Matrix Representations

Visualizing network data is applicable in domains such as biology, engineering, and social sciences. We report the results of a study comparing the effectiveness of the two primary techniques for showing network data: node-link diagrams and adjacency matrices. Specifically, an evaluation with a large number of online participants revealed statistically significant differences between the two visualizations. Our work adds to existing research in several ways. First, we explore a broad spectrum of network tasks, many of which had not been previously evaluated. Second, our study uses a large dataset, typical of many real-life networks not explored by previous studies. Third, we leverage crowdsourcing to evaluate many tasks with many participants.

cs.HC↗

arXiv2017

Research Topics Map: rtopmap

In this paper we describe a system for visualizing and analyzing worldwide research topics, {\tt rtopmap}. We gather data from google scholar academic research profiles, putting together a weighted topics graph, consisting of over 35,000 nodes and 646,000 edges. The nodes correspond to self-reported research topics, and edges correspond to co-occurring topics in google scholar profiles. The {\tt rtopmap} system supports zooming/panning/searching and other google-maps-based interactive features. With the help of map overlays, we also visualize the strengths and weaknesses of different academic institutions in terms of human resources (e.g., number of researchers in different areas), as well as scholarly output (e.g., citation counts in different areas). Finally, we also visualize what parts of the map are associated with different academic departments, or with specific documents (such as research papers, or calls for proposals). The system itself is available at \url{http://rtopmap.arl.arizona.edu/}.

cs.IR↗

arXiv2017

On the Planar Split Thickness of Graphs

Motivated by applications in graph drawing and information visualization, we examine the planar split thickness of a graph, that is, the smallest $k$ such that the graph is $k$-splittable into a planar graph. A $k$-split operation substitutes a vertex $v$ by at most $k$ new vertices such that each neighbor of $v$ is connected to at least one of the new vertices. We first examine the planar split thickness of complete graphs, complete bipartite graphs, multipartite graphs, bounded degree graphs, and genus-1 graphs. We then prove that it is NP-hard to recognize graphs that are $2$-splittable into a planar graph, and show that one can approximate the planar split thickness of a graph within a constant factor. If the treewidth is bounded, then we can even verify $k$-splittability in linear time, for a constant $k$.

math.CO↗

arXiv2017

On the Maximum Crossing Number

Research about crossings is typically about minimization. In this paper, we consider \emph{maximizing} the number of crossings over all possible ways to draw a given graph in the plane. Alpert et al. [Electron. J. Combin., 2009] conjectured that any graph has a \emph{convex} straight-line drawing, e.g., a drawing with vertices in convex position, that maximizes the number of edge crossings. We disprove this conjecture by constructing a planar graph on twelve vertices that allows a non-convex drawing with more crossings than any convex one. Bald et al. [Proc. COCOON, 2016] showed that it is NP-hard to compute the maximum number of crossings of a geometric graph and that the weighted geometric case is NP-hard to approximate. We strengthen these results by showing hardness of approximation even for the unweighted geometric case and prove that the unweighted topological case is NP-hard.

cs.CG↗

arXiv2017

L-Graphs and Monotone L-Graphs

In an $\mathsf{L}$-embedding of a graph, each vertex is represented by an $\mathsf{L}$-segment, and two segments intersect each other if and only if the corresponding vertices are adjacent in the graph. If the corner of each $\mathsf{L}$-segment in an $\mathsf{L}$-embedding lies on a straight line, we call it a monotone $\mathsf{L}$-embedding. In this paper we give a full characterization of monotone $\mathsf{L}$-embeddings by introducing a new class of graphs which we call "non-jumping" graphs. We show that a graph admits a monotone $\mathsf{L}$-embedding if and only if the graph is a non-jumping graph. Further, we show that outerplanar graphs, convex bipartite graphs, interval graphs, 3-leaf power graphs, and complete graphs are subclasses of non-jumping graphs. Finally, we show that distance-hereditary graphs and $k$-leaf power graphs ($k\le 4$) admit $\mathsf{L}$-embeddings.

cs.CG↗

arXiv2016

The State of the Art in Cartograms

Cartograms combine statistical and geographical information in thematic maps, where areas of geographical regions (e.g., countries, states) are scaled in proportion to some statistic (e.g., population, income). Cartograms make it possible to gain insight into patterns and trends in the world around us and have been very popular visualizations for geo-referenced data for over a century. This work surveys cartogram research in visualization, cartography and geometry, covering a broad spectrum of different cartogram types: from the traditional rectangular and table cartograms, to Dorling and diffusion cartograms. A particular focus is the study of the major cartogram dimensions: statistical accuracy, geographical accuracy, and topological accuracy. We review the history of cartograms, describe the algorithms for generating them, and consider task taxonomies. We also review quantitative and qualitative evaluations, and we use these to arrive at design guidelines and research challenges.

cs.HC↗

arXiv2016

Low Ply Drawings of Trees

We consider the recently introduced model of \emph{low ply graph drawing}, in which the ply-disks of the vertices do not have many common overlaps, which results in a good distribution of the vertices in the plane. The \emph{ply-disk} of a vertex in a straight-line drawing is the disk centered at it whose radius is half the length of its longest incident edge. The largest number of ply-disks having a common overlap is called the \emph{ply-number} of the drawing. We focus on trees. We first consider drawings of trees with constant ply-number, proving that they may require exponential area, even for stars, and that they may not even exist for bounded-degree trees. Then, we turn our attention to drawings with logarithmic ply-number and show that trees with maximum degree $6$ always admit such drawings in polynomial area.

cs.DS↗

arXiv2016

Analysis of Network Clustering Algorithms and Cluster Quality Metrics at Scale

Notions of community quality underlie network clustering. While studies surrounding network clustering are increasingly common, a precise understanding of the realtionship between different cluster quality metrics is unknown. In this paper, we examine the relationship between stand-alone cluster quality metrics and information recovery metrics through a rigorous analysis of four widely-used network clustering algorithms -- Louvain, Infomap, label propagation, and smart local moving. We consider the stand-alone quality metrics of modularity, conductance, and coverage, and we consider the information recovery metrics of adjusted Rand score, normalized mutual information, and a variant of normalized mutual information used in previous work. Our study includes both synthetic graphs and empirical data sets of sizes varying from 1,000 to 1,000,000 nodes. We find significant differences among the results of the different cluster quality metrics. For example, clustering algorithms can return a value of 0.4 out of 1 on modularity but score 0 out of 1 on information recovery. We find conductance, though imperfect, to be the stand-alone quality metric that best indicates performance on information recovery metrics. Our study shows that the variant of normalized mutual information used in previous work cannot be assumed to differ only slightly from traditional normalized mutual information. Smart local moving is the best performing algorithm in our study, but discrepancies between cluster evaluation metrics prevent us from declaring it absolutely superior. Louvain performed better than Infomap in nearly all the tests in our study, contradicting the results of previous work in which Infomap was superior to Louvain. We find that although label propagation performs poorly when clusters are less clearly defined, it scales efficiently and accurately to large graphs with well-defined clusters.

cs.SI↗

arXiv2016

Towards using social media to identify individuals at risk for preventable chronic illness

We describe a strategy for the acquisition of training data necessary to build a social-media-driven early detection system for individuals at risk for (preventable) type 2 diabetes mellitus (T2DM). The strategy uses a game-like quiz with data and questions acquired semi-automatically from Twitter. The questions are designed to inspire participant engagement and collect relevant data to train a public-health model applied to individuals. Prior systems designed to use social media such as Twitter to predict obesity (a risk factor for T2DM) operate on entire communities such as states, counties, or cities, based on statistics gathered by government agencies. Because there is considerable variation among individuals within these groups, training data on the individual level would be more effective, but this data is difficult to acquire. The approach proposed here aims to address this issue. Our strategy has two steps. First, we trained a random forest classifier on data gathered from (public) Twitter statuses and state-level statistics with state-of-the-art accuracy. We then converted this classifier into a 20-questions-style quiz and made it available online. In doing so, we achieved high engagement with individuals that took the quiz, while also building a training set of voluntarily supplied individual-level data for future classification.

cs.CL↗

arXiv2015

On Embeddability of Buses in Point Sets

Set membership of points in the plane can be visualized by connecting corresponding points via graphical features, like paths, trees, polygons, ellipses. In this paper we study the \emph{bus embeddability problem} (BEP): given a set of colored points we ask whether there exists a planar realization with one horizontal straight-line segment per color, called bus, such that all points with the same color are connected with vertical line segments to their bus. We present an ILP and an FPT algorithm for the general problem. For restricted versions of this problem, such as when the relative order of buses is predefined, or when a bus must be placed above all its points, we provide efficient algorithms. We show that another restricted version of the problem can be solved using 2-stack pushall sorting. On the negative side we prove the NP-completeness of a special case of BEP.

cs.CG↗

arXiv2015

Visualizing Cartograms: Goals and Task Taxonomy

Cartograms are maps in which areas of geographic regions (countries, states) appear in proportion to some variable of interest (population, income). Cartograms are popular visualizations for geo-referenced data that have been around for over a century. Newspapers, magazines, textbooks, blogs, and presentations frequently employ cartograms to show voting results, popularity, and in general, geographic patterns. Despite the popularity of cartograms and the large number of cartogram variants, there are very few studies evaluating the effectiveness of cartograms in conveying information. In order to design cartograms as a useful visualization tool and to be able to compare the effectiveness of cartograms generated by different methods, we need to study the nature of information conveyed and the specific tasks that can be performed on cartograms. In this paper we consider a set of cartogram visualization tasks, based on standard taxonomies from cartography and information visualization. We then propose a cartogram task taxonomy that can be used to organize not only the tasks considered here but also other tasks that might be added later.

cs.HC↗

arXiv2015

Towards Understanding Enjoyment and Flow in Information Visualization

Traditionally, evaluation studies in information visualization have measured effectiveness by assessing performance time and accuracy. More recently, there has been a concerted effort to understand aspects beyond time and errors. In this paper we study enjoyment, which, while arguably not the primary goal of visualization, has been shown to impact performance and memorability. Different models of enjoyment have been proposed in psychology, education and gaming; yet there is no standard approach to evaluate and measure enjoyment in visualization. In this paper we relate the flow model of Csikszentmihalyi to Munzner's nested model of visualization evaluation and previous work in the area. We suggest that, even though previous papers tackled individual elements of flow, in order to understand what specifically makes a visualization enjoyable, it might be necessary to measure all specific elements.

cs.HC↗

arXiv2014

Improved Approximation Algorithms for Box Contact Representations

We study the following geometric representation problem: Given a graph whose vertices correspond to axis-aligned rectangles with fixed dimensions, arrange the rectangles without overlaps in the plane such that two rectangles touch if the graph contains an edge between them. This problem is called \textsc{Contact Representation of Word Networks} (\textsc{Crown}) since it formalizes the geometric problem behind drawing word clouds in which semantically related words are close to each other. \textsc{Crown} is known to be NP-hard, and there are approximation algorithms for certain graph classes for the optimization version, \textsc{Max-Crown}, in which realizing each desired adjacency yields a certain profit. We present the first $O(1)$-approximation algorithm for the general case, when the input is a complete weighted graph, and for the bipartite case. Since the subgraph of realized adjacencies is necessarily planar, we also consider several planar graph classes (namely stars, trees, outerplanar, and planar graphs), improving upon the known results. For some graph classes, we also describe improvements in the unweighted case, where each adjacency yields the same profit. Finally, we show that the problem is APX-hard on bipartite graphs of bounded maximum degree.

cs.DS↗

arXiv2014

The Maximum k-Differential Coloring Problem

Given an $n$-vertex graph $G$ and two positive integers $d,k \in \mathbb{N}$, the ($d,kn$)-differential coloring problem asks for a coloring of the vertices of $G$ (if one exists) with distinct numbers from 1 to $kn$ (treated as \emph{colors}), such that the minimum difference between the two colors of any adjacent vertices is at least $d$. While it was known that the problem of determining whether a general graph is ($2,n$)-differential colorable is NP-complete, our main contribution is a complete characterization of bipartite, planar and outerplanar graphs that admit ($2,kn$)-differential colorings. For practical reasons, we consider also color ranges larger than $n$, i.e., $k > 1$. We show that it is NP-complete to determine whether a graph admits a ($3,2n$)-differential coloring. The same negative result holds for the ($\lfloor 2n/3 \rfloor, 2n$-differential coloring problem, even in the case where the input graph is planar.

cs.DM↗

arXiv2014

Analyzing the Language of Food on Social Media

We investigate the predictive power behind the language of food on social media. We collect a corpus of over three million food-related posts from Twitter and demonstrate that many latent population characteristics can be directly predicted from this data: overweight rate, diabetes rate, political leaning, and home geographical location of authors. For all tasks, our language-based models significantly outperform the majority-class baselines. Performance is further improved with more complex natural language processing, such as topic modeling. We analyze which textual features have most predictive power for these datasets, providing insight into the connections between the language of food, geographic locale, and community characteristics. Lastly, we design and implement an online system for real-time query and visualization of the dataset. Visualization tools, such as geo-referenced heatmaps, semantics-preserving wordclouds and temporal histograms, allow us to discover more complex, global patterns mirrored in the language of food.

cs.CL↗

arXiv2014

Computing Consensus Curves

We consider the problem of extracting accurate average ant trajectories from many (possibly inaccurate) input trajectories contributed by citizen scientists. Although there are many generic software tools for motion tracking and specific ones for insect tracking, even untrained humans are much better at this task, provided a robust method to computing the average trajectories. We implemented and tested several local (one ant at a time) and global (all ants together) method. Our best performing algorithm uses a novel global method, based on finding edge-disjoint paths in an ant-interaction graph constructed from the input trajectories. The underlying optimization problem is a new and interesting variant of network flow. Even though the problem is NP-hard, we implemented two heuristics, which work very well in practice, outperforming all other approaches, including the best automated system.

cs.CG↗

arXiv2014

Node, Node-Link, and Node-Link-Group Diagrams: An Evaluation

Effectively showing the relationships between objects in a dataset is one of the main tasks in information visualization. Typically there is a well-defined notion of distance between pairs of objects, and traditional approaches such as principal component analysis or multi-dimensional scaling are used to place the objects as points in 2D space, so that similar objects are close to each other. In another typical setting, the dataset is visualized as a network graph, where related nodes are connected by links. More recently, datasets are also visualized as maps, where in addition to nodes and links, there is an explicit representation of groups and clusters. We consider these three Techniques, characterized by a progressive increase of the amount of encoded information: node diagrams, node-link diagrams and node-link-group diagrams. We assess these three types of diagrams with a controlled experiment that covers nine different tasks falling broadly in three categories: node-based tasks, network-based tasks and group-based tasks. Our findings indicate that adding links, or links and group representations, does not negatively impact performance (time and accuracy) of node-based tasks. Similarly, adding group representations does not negatively impact the performance of network-based tasks. Node-link-group diagrams outperform the others on group-based tasks. These conclusions contradict results in other studies, in similar but subtly different settings. Taken together, however, such results can have significant implications for the design of standard and domain specific visualizations tools.

cs.HC↗

arXiv2014

Group-Level Graph Visualization Taxonomy

Task taxonomies for graph and network visualizations focus on tasks commonly encountered when analyzing graph connectivity and topology. However, in many application fields such as the social sciences (social networks), biology (protein interaction models), software engineering (program call graphs), connectivity and topology information is intertwined with group, clustering, and hierarchical information. Several recent visualization techniques, such as BubbleSets, LineSets and GMap, make explicit use of grouping and clustering, but evaluating such visualization has been difficult due to the lack of standardized group-level tasks. With this in mind, our goal is to define a new set of tasks that assess group-level comprehension. We propose several types of group-level tasks and provide several examples of each type. Finally, we characterize some of the proposed tasks using the multi-level typology of abstract visualization tasks. We believe that adding group-level tasks to the task taxonomy for graph visualization would make the taxonomy more useful for the recent graph visualization techniques. It would help evaluators define and categorize new tasks, and it would help generalize individual results collected in controlled experiments.

cs.HC↗