arXiv subjects

Subba Reddy Oota

Publications and source records attributed to Subba Reddy Oota.

At least 19 recordsLinked to original sources

arXiv2026

Task-conditioned probing of instruction-tuned multimodal LLMs: Region-specific brain alignment patterns under naturalistic stimuli

Recent voxel-wise multimodal brain encoding studies have shown that multimodal large language models (MLLMs) exhibit a higher degree of brain alignment compared to unimodal models. More recently, instruction-tuned multimodal (IT) models have been shown to generate task-specific representations that align strongly with brain activity, yet most prior evaluations focus on unimodal stimuli or non-instruction-tuned models under multimodal stimuli. We still lack a clear understanding of whether instruction-tuning is associated with IT-MLLMs organizing their representations around functional task demands or if they simply reflect surface semantics. To address this, we estimate brain alignment by predicting fMRI responses recorded during naturalistic movie watching (video with audio) from MLLM representations. Using instruction-specific embeddings from six video and two audio IT-MLLMs, across 13 video task instructions, we find that instruction-tuned video MLLMs show higher brain alignment than in-context learning (ICL) multimodal models (~9%), non-instruction-tuned multimodal models (~15%), and unimodal baselines (~20%). Our evaluation of MLLMs across video and audio tasks, and language-guided probing produces distinct task-specific MLLM representations that vary across brain regions. We also find that ICL models show strong semantic organization (r=0.78), while IT models show weak coupling to instruction-text semantics (r=0.14), consistent with task-conditioned subspaces associated with higher brain alignment. These findings are consistent with an association between task-specific instructions and stronger brain-MLLM alignment, and open new avenues for mapping joint information processing in both systems. We make the code publicly available [https://github.com/subbareddy248/mllm_videos].

q-bio.NC↗

arXiv2026

How does longer temporal context enhance multimodal narrative video processing in the brain?

Understanding how humans and artificial intelligence systems process complex narrative videos is a fundamental challenge at the intersection of neuroscience and machine learning. This study investigates how the temporal context length of video clips (3--24 s clips) and the narrative-task prompting shape brain-model alignment during naturalistic movie watching. Using fMRI recordings from participants viewing full-length movies, we examine how brain regions sensitive to narrative context dynamically represent information over varying timescales and how these neural patterns align with model-derived features. We find that increasing clip duration substantially improves brain alignment for multimodal large language models (MLLMs), whereas unimodal video models show little to no gain. Further, shorter temporal windows align with perceptual and early language regions, while longer windows preferentially align higher-order integrative regions, mirrored by a layer-to-cortex hierarchy in MLLMs. Finally, experiments with four narrative-task prompts show that they elicit task-specific, region-dependent brain alignment patterns and context-dependent shifts in clip-level tuning in higher-order regions. Our work positions long-form narrative movies as a principled testbed for studying long-timescale temporal integration in long-context MLLMs and its relationship to cortical responses during narrative comprehension.

q-bio.NC↗

arXiv2026

Brain alignment of reasoning and action representations from vision-language and action models during naturalistic gameplay

Understanding how humans and artificial intelligence systems predict and plan by interacting with their environment is a fundamental challenge at the intersection of neuroscience and machine learning. Most brain-encoding studies focus on aligning artificial models with brain activity during language comprehension or passive visual processing, while interactive brain-alignment studies have to date been largely limited to reinforcement-learning (RL) agents and theory-based models. To address this gap, we study brain alignment of representative models from two foundation-model families, namely vision-language models (VLMs) and large-action models (LAMs), using fMRI recordings from participants playing naturalistic Atari-style video games. Specifically, we examine how action-focused and reasoning-focused prompts shape model's internal representations and align with fMRI brain activity. First, we find that both VLMs and LAMs exhibit significantly exhibit voxel-wise encoding performance than RL baselines, with the advantage holding even under matched feature dimensionality. Second, prompt-driven gains scale with the cortical processing hierarchy: the largest improvements appear in frontal-parietal and motor-planning regions, while early visual cortex gains roughly half as much. Third, variance partitioning reveals a qualitatively different representational organization: VLM is prompt-symmetric (12.5% unique action vs. 13.6% unique reasoning), whereas LAM is prompt-asymmetric (27% unique action vs. -5% unique reasoning), with the asymmetry strongest in frontal-motor cortex. Together, these results demonstrate that action-specialized fine-tuning reorganizes multimodal representations toward action-relevant neural computations even when whole-brain prediction accuracy is statistically equivalent between VLM and LAM.

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arXiv2026

A Deep Multi-Modal Method for Patient Wound Healing Assessment

Hospitalization of patients is one of the major factors for high wound care costs. Most patients do not acquire a wound which needs immediate hospitalization. However, due to factors such as delay in treatment, patient's non-compliance or existing co-morbid conditions, an injury can deteriorate and ultimately lead to patient hospitalization. In this paper, we propose a deep multi-modal method to predict the patient's risk of hospitalization. Our goal is to predict the risk confidently by collectively using the wound variables and wound images of the patient. Existing works in this domain have mainly focused on healing trajectories based on distinct wound types. We developed a transfer learning-based wound assessment solution, which can predict both wound variables from wound images and their healing trajectories, which is our primary contribution. We argue that the development of a novel model can help in early detection of the complexities in the wound, which might affect the healing process and also reduce the time spent by a clinician to diagnose the wound.

cs.CV↗

arXiv2026

Linguistic properties and model scale in brain encoding: from small to compressed language models

Recent work has shown that scaling large language models (LLMs) improves their alignment with human brain activity, yet it remains unclear what drives these gains and which representational properties are responsible. Although larger models often yield better task performance and brain alignment, they are increasingly difficult to analyze mechanistically. This raises a fundamental question: what is the minimal model capacity required to capture brain-relevant representations? To address this question, we systematically investigate how constraining model scale and numerical precision affects brain alignment. We compare full-precision LLMs, small language models (SLMs), and compressed variants (quantized and pruned) by predicting fMRI responses during naturalistic language comprehension. Across model families up to 14B parameters, we find that 3B SLMs achieve brain predictivity indistinguishable from larger LLMs, whereas 1B models degrade substantially, particularly in semantic language regions. Brain alignment is remarkably robust to compression: most quantization and pruning methods preserve neural predictivity, with GPTQ as a consistent exception. Linguistic probing reveals a dissociation between task performance and brain predictivity: compression degrades discourse, syntax, and morphology, yet brain predictivity remains largely unchanged. Overall, brain alignment saturates at modest model scales and is resilient to compression, challenging common assumptions about neural scaling and motivating compact models for brain-aligned language modeling.

q-bio.NC↗

arXiv2025

IndicSentEval: How Effectively do Multilingual Transformer Models encode Linguistic Properties for Indic Languages?

Transformer-based models have revolutionized the field of natural language processing. To understand why they perform so well and to assess their reliability, several studies have focused on questions such as: Which linguistic properties are encoded by these models, and to what extent? How robust are these models in encoding linguistic properties when faced with perturbations in the input text? However, these studies have mainly focused on BERT and the English language. In this paper, we investigate similar questions regarding encoding capability and robustness for 8 linguistic properties across 13 different perturbations in 6 Indic languages, using 9 multilingual Transformer models (7 universal and 2 Indic-specific). To conduct this study, we introduce a novel multilingual benchmark dataset, IndicSentEval, containing approximately $\sim$47K sentences. Surprisingly, our probing analysis of surface, syntactic, and semantic properties reveals that while almost all multilingual models demonstrate consistent encoding performance for English, they show mixed results for Indic languages. As expected, Indic-specific multilingual models capture linguistic properties in Indic languages better than universal models. Intriguingly, universal models broadly exhibit better robustness compared to Indic-specific models, particularly under perturbations such as dropping both nouns and verbs, dropping only verbs, or keeping only nouns. Overall, this study provides valuable insights into probing and perturbation-specific strengths and weaknesses of popular multilingual Transformer-based models for different Indic languages. We make our code and dataset publicly available [https://github.com/aforakhilesh/IndicBertology].

cs.CL↗

arXiv2025

Multi-modal brain encoding models for multi-modal stimuli

Despite participants engaging in unimodal stimuli, such as watching images or silent videos, recent work has demonstrated that multi-modal Transformer models can predict visual brain activity impressively well, even with incongruent modality representations. This raises the question of how accurately these multi-modal models can predict brain activity when participants are engaged in multi-modal stimuli. As these models grow increasingly popular, their use in studying neural activity provides insights into how our brains respond to such multi-modal naturalistic stimuli, i.e., where it separates and integrates information across modalities through a hierarchy of early sensory regions to higher cognition. We investigate this question by using multiple unimodal and two types of multi-modal models-cross-modal and jointly pretrained-to determine which type of model is more relevant to fMRI brain activity when participants are engaged in watching movies. We observe that both types of multi-modal models show improved alignment in several language and visual regions. This study also helps in identifying which brain regions process unimodal versus multi-modal information. We further investigate the contribution of each modality to multi-modal alignment by carefully removing unimodal features one by one from multi-modal representations, and find that there is additional information beyond the unimodal embeddings that is processed in the visual and language regions. Based on this investigation, we find that while for cross-modal models, their brain alignment is partially attributed to the video modality; for jointly pretrained models, it is partially attributed to both the video and audio modalities. This serves as a strong motivation for the neuroscience community to investigate the interpretability of these models for deepening our understanding of multi-modal information processing in brain.

q-bio.NC↗

arXiv2025

Correlating instruction-tuning (in multimodal models) with vision-language processing (in the brain)

Transformer-based language models, though not explicitly trained to mimic brain recordings, have demonstrated surprising alignment with brain activity. Progress in these models-through increased size, instruction-tuning, and multimodality-has led to better representational alignment with neural data. Recently, a new class of instruction-tuned multimodal LLMs (MLLMs) have emerged, showing remarkable zero-shot capabilities in open-ended multimodal vision tasks. However, it is unknown whether MLLMs, when prompted with natural instructions, lead to better brain alignment and effectively capture instruction-specific representations. To address this, we first investigate brain alignment, i.e., measuring the degree of predictivity of neural visual activity using text output response embeddings from MLLMs as participants engage in watching natural scenes. Experiments with 10 different instructions show that MLLMs exhibit significantly better brain alignment than vision-only models and perform comparably to non-instruction-tuned multimodal models like CLIP. We also find that while these MLLMs are effective at generating high-quality responses suitable to the task-specific instructions, not all instructions are relevant for brain alignment. Further, by varying instructions, we make the MLLMs encode instruction-specific visual concepts related to the input image. This analysis shows that MLLMs effectively capture count-related and recognition-related concepts, demonstrating strong alignment with brain activity. Notably, the majority of the explained variance of the brain encoding models is shared between MLLM embeddings of image captioning and other instructions. These results suggest that enhancing MLLMs' ability to capture task-specific information could lead to better differentiation between various types of instructions, and thereby improving their precision in predicting brain responses.

q-bio.NC↗

arXiv2025

USDC: A Dataset of $\underline{U}$ser $\underline{S}$tance and $\underline{D}$ogmatism in Long $\underline{C}$onversations

Analyzing user opinion changes in long conversation threads is extremely critical for applications like enhanced personalization, market research, political campaigns, customer service, targeted advertising, and content moderation. Unfortunately, previous studies on stance and dogmatism in user conversations have focused on training models using datasets annotated at the post level, treating each post as independent and randomly sampling posts from conversation threads. Hence, first, we build a dataset for studying user opinion fluctuations in 764 long multi-user Reddit conversation threads, called USDC. USDC contains annotations for 2 tasks: i) User Stance classification, which involves labeling a user's stance in a post within a conversation on a five-point scale; ii) User Dogmatism classification, which involves labeling a user's overall opinion in the conversation on a four-point scale. Besides being time-consuming and costly, manual annotations for USDC are challenging because: 1) Conversation threads could be very long, increasing the chances of noisy annotations; and 2) Interpreting instances where a user changes their opinion within a conversation is difficult because often such transitions are subtle and not expressed explicitly. Hence, we leverage majority voting on zero-shot, one-shot, and few-shot annotations from Mistral Large and GPT-4 to automate the annotation process. Human annotations on 200 test conversations achieved inter-annotator agreement scores of 0.49 for stance and 0.50 for dogmatism with these LLM annotations, indicating a reasonable level of consistency between human and LLM annotations. USDC is then used to finetune and instruction-tune multiple deployable small language models like LLaMA, Falcon and Vicuna for the stance and dogmatism classification tasks. We make the code and dataset publicly available [https://github.com/mounikamarreddy/USDC].

cs.CL↗

arXiv2024

Deep Neural Networks and Brain Alignment: Brain Encoding and Decoding (Survey)

Can artificial intelligence unlock the secrets of the human brain? How do the inner mechanisms of deep learning models relate to our neural circuits? Is it possible to enhance AI by tapping into the power of brain recordings? These captivating questions lie at the heart of an emerging field at the intersection of neuroscience and artificial intelligence. Our survey dives into this exciting domain, focusing on human brain recording studies and cutting-edge cognitive neuroscience datasets that capture brain activity during natural language processing, visual perception, and auditory experiences. We explore two fundamental approaches: encoding models, which attempt to generate brain activity patterns from sensory inputs; and decoding models, which aim to reconstruct our thoughts and perceptions from neural signals. These techniques not only promise breakthroughs in neurological diagnostics and brain-computer interfaces but also offer a window into the very nature of cognition. In this survey, we first discuss popular representations of language, vision, and speech stimuli, and present a summary of neuroscience datasets. We then review how the recent advances in deep learning transformed this field, by investigating the popular deep learning based encoding and decoding architectures, noting their benefits and limitations across different sensory modalities. From text to images, speech to videos, we investigate how these models capture the brain's response to our complex, multimodal world. While our primary focus is on human studies, we also highlight the crucial role of animal models in advancing our understanding of neural mechanisms. Throughout, we mention the ethical implications of these powerful technologies, addressing concerns about privacy and cognitive liberty. We conclude with a summary and discussion of future trends in this rapidly evolving field.

q-bio.NC↗

arXiv2024

Speech language models lack important brain-relevant semantics

Despite known differences between reading and listening in the brain, recent work has shown that text-based language models predict both text-evoked and speech-evoked brain activity to an impressive degree. This poses the question of what types of information language models truly predict in the brain. We investigate this question via a direct approach, in which we systematically remove specific low-level stimulus features (textual, speech, and visual) from language model representations to assess their impact on alignment with fMRI brain recordings during reading and listening. Comparing these findings with speech-based language models reveals starkly different effects of low-level features on brain alignment. While text-based models show reduced alignment in early sensory regions post-removal, they retain significant predictive power in late language regions. In contrast, speech-based models maintain strong alignment in early auditory regions even after feature removal but lose all predictive power in late language regions. These results suggest that speech-based models provide insights into additional information processed by early auditory regions, but caution is needed when using them to model processing in late language regions. We make our code publicly available. [https://github.com/subbareddy248/speech-llm-brain]

cs.CL↗

arXiv2023

Joint processing of linguistic properties in brains and language models

Language models have been shown to be very effective in predicting brain recordings of subjects experiencing complex language stimuli. For a deeper understanding of this alignment, it is important to understand the correspondence between the detailed processing of linguistic information by the human brain versus language models. We investigate this correspondence via a direct approach, in which we eliminate information related to specific linguistic properties in the language model representations and observe how this intervention affects the alignment with fMRI brain recordings obtained while participants listened to a story. We investigate a range of linguistic properties (surface, syntactic, and semantic) and find that the elimination of each one results in a significant decrease in brain alignment. Specifically, we find that syntactic properties (i.e. Top Constituents and Tree Depth) have the largest effect on the trend of brain alignment across model layers. These findings provide clear evidence for the role of specific linguistic information in the alignment between brain and language models, and open new avenues for mapping the joint information processing in both systems. We make the code publicly available [https://github.com/subbareddy248/linguistic-properties-brain-alignment].

cs.CL↗

arXiv2023

On Robustness of Finetuned Transformer-based NLP Models

Transformer-based pretrained models like BERT, GPT-2 and T5 have been finetuned for a large number of natural language processing (NLP) tasks, and have been shown to be very effective. However, while finetuning, what changes across layers in these models with respect to pretrained checkpoints is under-studied. Further, how robust are these models to perturbations in input text? Does the robustness vary depending on the NLP task for which the models have been finetuned? While there exists some work on studying the robustness of BERT finetuned for a few NLP tasks, there is no rigorous study that compares this robustness across encoder only, decoder only and encoder-decoder models. In this paper, we characterize changes between pretrained and finetuned language model representations across layers using two metrics: CKA and STIR. Further, we study the robustness of three language models (BERT, GPT-2 and T5) with eight different text perturbations on classification tasks from the General Language Understanding Evaluation (GLUE) benchmark, and generation tasks like summarization, free-form generation and question generation. GPT-2 representations are more robust than BERT and T5 across multiple types of input perturbation. Although models exhibit good robustness broadly, dropping nouns, verbs or changing characters are the most impactful. Overall, this study provides valuable insights into perturbation-specific weaknesses of popular Transformer-based models, which should be kept in mind when passing inputs. We make the code and models publicly available [https://github.com/PavanNeerudu/Robustness-of-Transformers-models].

cs.CL↗

arXiv2023

Syntactic Structure Processing in the Brain while Listening

Syntactic parsing is the task of assigning a syntactic structure to a sentence. There are two popular syntactic parsing methods: constituency and dependency parsing. Recent works have used syntactic embeddings based on constituency trees, incremental top-down parsing, and other word syntactic features for brain activity prediction given the text stimuli to study how the syntax structure is represented in the brain's language network. However, the effectiveness of dependency parse trees or the relative predictive power of the various syntax parsers across brain areas, especially for the listening task, is yet unexplored. In this study, we investigate the predictive power of the brain encoding models in three settings: (i) individual performance of the constituency and dependency syntactic parsing based embedding methods, (ii) efficacy of these syntactic parsing based embedding methods when controlling for basic syntactic signals, (iii) relative effectiveness of each of the syntactic embedding methods when controlling for the other. Further, we explore the relative importance of syntactic information (from these syntactic embedding methods) versus semantic information using BERT embeddings. We find that constituency parsers help explain activations in the temporal lobe and middle-frontal gyrus, while dependency parsers better encode syntactic structure in the angular gyrus and posterior cingulate cortex. Although semantic signals from BERT are more effective compared to any of the syntactic features or embedding methods, syntactic embedding methods explain additional variance for a few brain regions.

cs.CL↗

arXiv2022

GAE-ISumm: Unsupervised Graph-Based Summarization of Indian Languages

Document summarization aims to create a precise and coherent summary of a text document. Many deep learning summarization models are developed mainly for English, often requiring a large training corpus and efficient pre-trained language models and tools. However, English summarization models for low-resource Indian languages are often limited by rich morphological variation, syntax, and semantic differences. In this paper, we propose GAE-ISumm, an unsupervised Indic summarization model that extracts summaries from text documents. In particular, our proposed model, GAE-ISumm uses Graph Autoencoder (GAE) to learn text representations and a document summary jointly. We also provide a manually-annotated Telugu summarization dataset TELSUM, to experiment with our model GAE-ISumm. Further, we experiment with the most publicly available Indian language summarization datasets to investigate the effectiveness of GAE-ISumm on other Indian languages. Our experiments of GAE-ISumm in seven languages make the following observations: (i) it is competitive or better than state-of-the-art results on all datasets, (ii) it reports benchmark results on TELSUM, and (iii) the inclusion of positional and cluster information in the proposed model improved the performance of summaries.

cs.CL↗

arXiv2022

Neural Language Taskonomy: Which NLP Tasks are the most Predictive of fMRI Brain Activity?

Several popular Transformer based language models have been found to be successful for text-driven brain encoding. However, existing literature leverages only pretrained text Transformer models and has not explored the efficacy of task-specific learned Transformer representations. In this work, we explore transfer learning from representations learned for ten popular natural language processing tasks (two syntactic and eight semantic) for predicting brain responses from two diverse datasets: Pereira (subjects reading sentences from paragraphs) and Narratives (subjects listening to the spoken stories). Encoding models based on task features are used to predict activity in different regions across the whole brain. Features from coreference resolution, NER, and shallow syntax parsing explain greater variance for the reading activity. On the other hand, for the listening activity, tasks such as paraphrase generation, summarization, and natural language inference show better encoding performance. Experiments across all 10 task representations provide the following cognitive insights: (i) language left hemisphere has higher predictive brain activity versus language right hemisphere, (ii) posterior medial cortex, temporo-parieto-occipital junction, dorsal frontal lobe have higher correlation versus early auditory and auditory association cortex, (iii) syntactic and semantic tasks display a good predictive performance across brain regions for reading and listening stimuli resp.

cs.CL↗

arXiv2022

Multi-Task Text Classification using Graph Convolutional Networks for Large-Scale Low Resource Language

Graph Convolutional Networks (GCN) have achieved state-of-art results on single text classification tasks like sentiment analysis, emotion detection, etc. However, the performance is achieved by testing and reporting on resource-rich languages like English. Applying GCN for multi-task text classification is an unexplored area. Moreover, training a GCN or adopting an English GCN for Indian languages is often limited by data availability, rich morphological variation, syntax, and semantic differences. In this paper, we study the use of GCN for the Telugu language in single and multi-task settings for four natural language processing (NLP) tasks, viz. sentiment analysis (SA), emotion identification (EI), hate-speech (HS), and sarcasm detection (SAR). In order to evaluate the performance of GCN with one of the Indian languages, Telugu, we analyze the GCN based models with extensive experiments on four downstream tasks. In addition, we created an annotated Telugu dataset, TEL-NLP, for the four NLP tasks. Further, we propose a supervised graph reconstruction method, Multi-Task Text GCN (MT-Text GCN) on the Telugu that leverages to simultaneously (i) learn the low-dimensional word and sentence graph embeddings from word-sentence graph reconstruction using graph autoencoder (GAE) and (ii) perform multi-task text classification using these latent sentence graph embeddings. We argue that our proposed MT-Text GCN achieves significant improvements on TEL-NLP over existing Telugu pretrained word embeddings, and multilingual pretrained Transformer models: mBERT, and XLM-R. On TEL-NLP, we achieve a high F1-score for four NLP tasks: SA (0.84), EI (0.55), HS (0.83) and SAR (0.66). Finally, we show our model's quantitative and qualitative analysis on the four NLP tasks in Telugu.

cs.CL↗

arXiv2022

Visio-Linguistic Brain Encoding

Enabling effective brain-computer interfaces requires understanding how the human brain encodes stimuli across modalities such as visual, language (or text), etc. Brain encoding aims at constructing fMRI brain activity given a stimulus. There exists a plethora of neural encoding models which study brain encoding for single mode stimuli: visual (pretrained CNNs) or text (pretrained language models). Few recent papers have also obtained separate visual and text representation models and performed late-fusion using simple heuristics. However, previous work has failed to explore: (a) the effectiveness of image Transformer models for encoding visual stimuli, and (b) co-attentive multi-modal modeling for visual and text reasoning. In this paper, we systematically explore the efficacy of image Transformers (ViT, DEiT, and BEiT) and multi-modal Transformers (VisualBERT, LXMERT, and CLIP) for brain encoding. Extensive experiments on two popular datasets, BOLD5000 and Pereira, provide the following insights. (1) To the best of our knowledge, we are the first to investigate the effectiveness of image and multi-modal Transformers for brain encoding. (2) We find that VisualBERT, a multi-modal Transformer, significantly outperforms previously proposed single-mode CNNs, image Transformers as well as other previously proposed multi-modal models, thereby establishing new state-of-the-art. The supremacy of visio-linguistic models raises the question of whether the responses elicited in the visual regions are affected implicitly by linguistic processing even when passively viewing images. Future fMRI tasks can verify this computational insight in an appropriate experimental setting.

cs.CV↗