arXiv subjects

Subba Reddy Oota

Publications and source records attributed to Subba Reddy Oota.

26 records · Page 2Linked to original sources

arXiv2022

Visio-Linguistic Brain Encoding

Enabling effective brain-computer interfaces requires understanding how the human brain encodes stimuli across modalities such as visual, language (or text), etc. Brain encoding aims at constructing fMRI brain activity given a stimulus. There exists a plethora of neural encoding models which study brain encoding for single mode stimuli: visual (pretrained CNNs) or text (pretrained language models). Few recent papers have also obtained separate visual and text representation models and performed late-fusion using simple heuristics. However, previous work has failed to explore: (a) the effectiveness of image Transformer models for encoding visual stimuli, and (b) co-attentive multi-modal modeling for visual and text reasoning. In this paper, we systematically explore the efficacy of image Transformers (ViT, DEiT, and BEiT) and multi-modal Transformers (VisualBERT, LXMERT, and CLIP) for brain encoding. Extensive experiments on two popular datasets, BOLD5000 and Pereira, provide the following insights. (1) To the best of our knowledge, we are the first to investigate the effectiveness of image and multi-modal Transformers for brain encoding. (2) We find that VisualBERT, a multi-modal Transformer, significantly outperforms previously proposed single-mode CNNs, image Transformers as well as other previously proposed multi-modal models, thereby establishing new state-of-the-art. The supremacy of visio-linguistic models raises the question of whether the responses elicited in the visual regions are affected implicitly by linguistic processing even when passively viewing images. Future fMRI tasks can verify this computational insight in an appropriate experimental setting.

cs.CV↗

arXiv2022

Cross-view Brain Decoding

How the brain captures the meaning of linguistic stimuli across multiple views is still a critical open question in neuroscience. Consider three different views of the concept apartment: (1) picture (WP) presented with the target word label, (2) sentence (S) using the target word, and (3) word cloud (WC) containing the target word along with other semantically related words. Unlike previous efforts, which focus only on single view analysis, in this paper, we study the effectiveness of brain decoding in a zero-shot cross-view learning setup. Further, we propose brain decoding in the novel context of cross-view-translation tasks like image captioning (IC), image tagging (IT), keyword extraction (KE), and sentence formation (SF). Using extensive experiments, we demonstrate that cross-view zero-shot brain decoding is practical leading to ~0.68 average pairwise accuracy across view pairs. Also, the decoded representations are sufficiently detailed to enable high accuracy for cross-view-translation tasks with following pairwise accuracy: IC (78.0), IT (83.0), KE (83.7) and SF (74.5). Analysis of the contribution of different brain networks reveals exciting cognitive insights: (1) A high percentage of visual voxels are involved in image captioning and image tagging tasks, and a high percentage of language voxels are involved in the sentence formation and keyword extraction tasks. (2) Zero-shot accuracy of the model trained on S view and tested on WC view is better than same-view accuracy of the model trained and tested on WC view.

q-bio.NC↗

arXiv2020

Wound and episode level readmission risk or weeks to readmit: Why do patients get readmitted? How long does it take for a patient to get readmitted?

The Affordable care Act of 2010 had introduced Readmission reduction program in 2012 to reduce avoidable re-admissions to control rising healthcare costs. Wound care impacts 15 of medicare beneficiaries making it one of the major contributors of medicare health care cost. Health plans have been exploring proactive health care services that can focus on preventing wound recurrences and re-admissions to control the wound care costs. With rising costs of Wound care industry, it has become of paramount importance to reduce wound recurrences & patient re-admissions. What factors are responsible for a Wound to recur which ultimately lead to hospitalization or re-admission? Is there a way to identify the patients at risk of re-admission before the occurrence using data driven analysis? Patient re-admission risk management has become critical for patients suffering from chronic wounds such as diabetic ulcers, pressure ulcers, and vascular ulcers. Understanding the risk & the factors that cause patient readmission can help care providers and patients avoid wound recurrences. Our work focuses on identifying patients who are at high risk of re-admission & determining the time period with in which a patient might get re-admitted. Frequent re-admissions add financial stress to the patient & Health plan and deteriorate the quality of life of the patient. Having this information can allow a provider to set up preventive measures that can delay, if not prevent, patients' re-admission. On a combined wound & episode-level data set of patient's wound care information, our extended autoprognosis achieves a recall of 92 and a precision of 92 for the predicting a patient's re-admission risk. For new patient class, precision and recall are as high as 91 and 98, respectively. We are also able to predict the patient's discharge event for a re-admission event to occur through our model with a MAE of 2.3 weeks.

cs.LG↗

arXiv2020

Expert2Coder: Capturing Divergent Brain Regions Using Mixture of Regression Experts

fMRI semantic category understanding using linguistic encoding models attempts to learn a forward mapping that relates stimuli to the corresponding brain activation. State-of-the-art encoding models use a single global model (linear or non-linear) to predict brain activation given the stimulus. However, the critical assumption in these methods is that a priori different brain regions respond the same way to all the stimuli, that is, there is no modularity or specialization assumed for any region. This goes against the modularity theory, supported by many cognitive neuroscience investigations suggesting that there are functionally specialized regions in the brain. In this paper, we achieve this by clustering similar regions together and for every cluster we learn a different linear regression model using a mixture of linear experts model. The key idea here is that each linear expert captures the behaviour of similar brain regions. Given a new stimulus, the utility of the proposed model is twofold (i) predicts the brain activation as a weighted linear combination of the activations of multiple linear experts and (ii) to learn multiple experts corresponding to different brain regions. We argue that each expert captures activity patterns related to a particular region of interest (ROI) in the human brain. This study helps in understanding the brain regions that are activated together given different kinds of stimuli. Importantly, we suggest that the mixture of regression experts (MoRE) framework successfully combines the two principles of organization of function in the brain, namely that of specialization and integration. Experiments on fMRI data from paradigm 1 [1]where participants view linguistic stimuli show that the proposed MoRE model has better prediction accuracy compared to that of conventional models.

cs.LG↗

arXiv2019

Affect in Tweets Using Experts Model

Estimating the intensity of emotion has gained significance as modern textual inputs in potential applications like social media, e-retail markets, psychology, advertisements etc., carry a lot of emotions, feelings, expressions along with its meaning. However, the approaches of traditional sentiment analysis primarily focuses on classifying the sentiment in general (positive or negative) or at an aspect level(very positive, low negative, etc.) and cannot exploit the intensity information. Moreover, automatically identifying emotions like anger, fear, joy, sadness, disgust etc., from text introduces challenging scenarios where single tweet may contain multiple emotions with different intensities and some emotions may even co-occur in some of the tweets. In this paper, we propose an architecture, Experts Model, inspired from the standard Mixture of Experts (MoE) model. The key idea here is each expert learns different sets of features from the feature vector which helps in better emotion detection from the tweet. We compared the results of our Experts Model with both baseline results and top five performers of SemEval-2018 Task-1, Affect in Tweets (AIT). The experimental results show that our proposed approach deals with the emotion detection problem and stands at top-5 results.

cs.IR↗

arXiv2018

Mixture of Regression Experts in fMRI Encoding

fMRI semantic category understanding using linguistic encoding models attempt to learn a forward mapping that relates stimuli to the corresponding brain activation. Classical encoding models use linear multi-variate methods to predict the brain activation (all voxels) given the stimulus. However, these methods essentially assume multiple regions as one large uniform region or several independent regions, ignoring connections among them. In this paper, we present a mixture of experts-based model where a group of experts captures brain activity patterns related to particular regions of interest (ROI) and also show the discrimination across different experts. The model is trained word stimuli encoded as 25-dimensional feature vectors as input and the corresponding brain responses as output. Given a new word (25-dimensional feature vector), it predicts the entire brain activation as the linear combination of multiple experts brain activations. We argue that each expert learns a certain region of brain activations corresponding to its category of words, which solves the problem of identifying the regions with a simple encoding model. We showcase that proposed mixture of experts-based model indeed learns region-based experts to predict the brain activations with high spatial accuracy.

cs.LG↗

arXiv2018

fMRI Semantic Category Decoding using Linguistic Encoding of Word Embeddings

The dispute of how the human brain represents conceptual knowledge has been argued in many scientific fields. Brain imaging studies have shown that the spatial patterns of neural activation in the brain are correlated with thinking about different semantic categories of words (for example, tools, animals, and buildings) or when viewing the related pictures. In this paper, we present a computational model that learns to predict the neural activation captured in functional magnetic resonance imaging (fMRI) data of test words. Unlike the models with hand-crafted features that have been used in the literature, in this paper we propose a novel approach wherein decoding models are built with features extracted from popular linguistic encodings of Word2Vec, GloVe, Meta-Embeddings in conjunction with the empirical fMRI data associated with viewing several dozen concrete nouns. We compared these models with several other models that use word features extracted from FastText, Randomly-generated features, Mitchell's 25 features [1]. The experimental results show that the predicted fMRI images using Meta-Embeddings meet the state-of-the-art performance. Although models with features from GloVe and Word2Vec predict fMRI images similar to the state-of-the-art model, model with features from Meta-Embeddings predicts significantly better. The proposed scheme that uses popular linguistic encoding offers a simple and easy approach for semantic decoding from fMRI experiments.

q-bio.NC↗

arXiv2017

Clickbait detection using word embeddings

Clickbait is a pejorative term describing web content that is aimed at generating online advertising revenue, especially at the expense of quality or accuracy, relying on sensationalist headlines or eye-catching thumbnail pictures to attract click-throughs and to encourage forwarding of the material over online social networks. We use distributed word representations of the words in the title as features to identify clickbaits in online news media. We train a machine learning model using linear regression to predict the cickbait score of a given tweet. Our methods achieve an F1-score of 64.98\% and an MSE of 0.0791. Compared to other methods, our method is simple, fast to train, does not require extensive feature engineering and yet moderately effective.

cs.CL↗