arXiv subjects

Tao Zhang

Publications and source records attributed to Tao Zhang.

At least 289 records · Page 16Linked to original sources

arXiv2025

UNIP: Rethinking Pre-trained Attention Patterns for Infrared Semantic Segmentation

Pre-training techniques significantly enhance the performance of semantic segmentation tasks with limited training data. However, the efficacy under a large domain gap between pre-training (e.g. RGB) and fine-tuning (e.g. infrared) remains underexplored. In this study, we first benchmark the infrared semantic segmentation performance of various pre-training methods and reveal several phenomena distinct from the RGB domain. Next, our layerwise analysis of pre-trained attention maps uncovers that: (1) There are three typical attention patterns (local, hybrid, and global); (2) Pre-training tasks notably influence the pattern distribution across layers; (3) The hybrid pattern is crucial for semantic segmentation as it attends to both nearby and foreground elements; (4) The texture bias impedes model generalization in infrared tasks. Building on these insights, we propose UNIP, a UNified Infrared Pre-training framework, to enhance the pre-trained model performance. This framework uses the hybrid-attention distillation NMI-HAD as the pre-training target, a large-scale mixed dataset InfMix for pre-training, and a last-layer feature pyramid network LL-FPN for fine-tuning. Experimental results show that UNIP outperforms various pre-training methods by up to 13.5\% in average mIoU on three infrared segmentation tasks, evaluated using fine-tuning and linear probing metrics. UNIP-S achieves performance on par with MAE-L while requiring only 1/10 of the computational cost. Furthermore, UNIP significantly surpasses state-of-the-art (SOTA) infrared or RGB segmentation methods and demonstrates broad potential for application in other modalities, such as RGB and depth. Our code is available at https://github.com/casiatao/UNIP.

cs.CV↗

arXiv2025

BS-Mamba for Black-Soil Area Detection On the Qinghai-Tibetan Plateau

Extremely degraded grassland on the Qinghai-Tibetan Plateau (QTP) presents a significant environmental challenge due to overgrazing, climate change, and rodent activity, which degrade vegetation cover and soil quality. These extremely degraded grassland on QTP, commonly referred to as black-soil area, require accurate assessment to guide effective restoration efforts. In this paper, we present a newly created QTP black-soil dataset, annotated under expert guidance. We introduce a novel neural network model, BS-Mamba, specifically designed for the black-soil area detection using UAV remote sensing imagery. The BS-Mamba model demonstrates higher accuracy in identifying black-soil area across two independent test datasets than the state-of-the-art models. This research contributes to grassland restoration by providing an efficient method for assessing the extent of black-soil area on the QTP.

cs.CV↗

arXiv2025

SCOPE-DTI: Semi-Inductive Dataset Construction and Framework Optimization for Practical Usability Enhancement in Deep Learning-Based Drug Target Interaction Prediction

Deep learning-based drug-target interaction (DTI) prediction methods have demonstrated strong performance; however, real-world applicability remains constrained by limited data diversity and modeling complexity. To address these challenges, we propose SCOPE-DTI, a unified framework combining a large-scale, balanced semi-inductive human DTI dataset with advanced deep learning modeling. Constructed from 13 public repositories, the SCOPE dataset expands data volume by up to 100-fold compared to common benchmarks such as the Human dataset. The SCOPE model integrates three-dimensional protein and compound representations, graph neural networks, and bilinear attention mechanisms to effectively capture cross domain interaction patterns, significantly outperforming state-of-the-art methods across various DTI prediction tasks. Additionally, SCOPE-DTI provides a user-friendly interface and database. We further validate its effectiveness by experimentally identifying anticancer targets of Ginsenoside Rh1. By offering comprehensive data, advanced modeling, and accessible tools, SCOPE-DTI accelerates drug discovery research.

cs.LG↗

arXiv2025

Search for Double Beta Decay of $^{136}$Xe to the $0^+_1$ Excited State of $^{136}$Ba with PandaX-4T

We perform a search of double beta decay of $^{136}$Xe to the excited state, $0^+_1$, of $^{136}$Ba (2$νββ$-0$_1^+$), using the dual-phase xenon detector of PandaX-4T with the first 94.9-day commissioning data. The multi-site events are reconstructed up to the MeV energy scale, which helps to improve the background model significantly. The background contribution from the stainless steel platform outside PandaX-4T cryostat is evaluated for the first time. No significant evidence for 2$νββ$-$0_1^+$ is observed, resulting in a lower limit on half-life of $7.5 \times 10^{22}$ yr at the 90% confidence level. This is the first experimental limit on such a rare decay in a natural xenon-based detector.

nucl-ex↗

arXiv2025

Search for MeV-Scale Axionlike Particles and Dark Photons with PandaX-4T

Axionlike particles (ALPs) and dark photons (DPs) are viable dark matter particle candidates. We have searched for possible ALP/DP signals in the PandaX-4T liquid xenon detector using 440 kg$\cdot$yr of data. A binned likelihood fit is constructed to search for possible mono-energetic peaks induced by the absorption processes between ALPs/DPs and atomic electrons of xenon. A detailed temporal model of decays associated with xenon isotopes is introduced to constrain the number of background events. No signal excess over background expectations is observed, and we have established the most stringent exclusion limits for most ALP/DP masses across the range of 150 keV/$c^2$ to 1 MeV/$c^2$. The improvement is particularly significant within the mass range of \text{150-400}~keV/$c^2$, with the average factor of 3.5 compared to previous results.

hep-ex↗

arXiv2025

JPDS-NN: Reinforcement Learning-Based Dynamic Task Allocation for Agricultural Vehicle Routing Optimization

The Entrance Dependent Vehicle Routing Problem (EDVRP) is a variant of the Vehicle Routing Problem (VRP) where the scale of cities influences routing outcomes, necessitating consideration of their entrances. This paper addresses EDVRP in agriculture, focusing on multi-parameter vehicle planning for irregularly shaped fields. To address the limitations of traditional methods, such as heuristic approaches, which often overlook field geometry and entrance constraints, we propose a Joint Probability Distribution Sampling Neural Network (JPDS-NN) to effectively solve the EDVRP. The network uses an encoder-decoder architecture with graph transformers and attention mechanisms to model routing as a Markov Decision Process, and is trained via reinforcement learning for efficient and rapid end-to-end planning. Experimental results indicate that JPDS-NN reduces travel distances by 48.4-65.4%, lowers fuel consumption by 14.0-17.6%, and computes two orders of magnitude faster than baseline methods, while demonstrating 15-25% superior performance in dynamic arrangement scenarios. Ablation studies validate the necessity of cross-attention and pre-training. The framework enables scalable, intelligent routing for large-scale farming under dynamic constraints.

cs.RO↗

arXiv2025

How human-derived brain organoids are built differently from brain organoids derived from genetically-close relatives: A multi-scale hypothesis

How genes affect tissue scale organization remains a longstanding biological puzzle. As experimental efforts aim to quantify gene expression, chromatin organization, cellular structure, and tissue structure, computational modeling lags behind. To address this gap, we merge a cellular-based tissue model with a nuclear model that includes a deformable lamina shell and chromatin to test multiscale hypotheses linking chromatin and tissue scales. We propose a multiscale hypothesis focusing on brain organoids to explain structural differences between brain organoids built from induced-pluripotent human stem cells and induced-pluripotent gorilla and chimpanzee cells. Recent experiments discover that a cell fate transition from neuroepithelial to radial glial cells includes a new intermediate state delayed in human organoids, which narrows and lengthens cells on the apical side. Experiments show that the transcription factor ZEB2 plays a major role in the emergence of this intermediate state with ZEB2 mRNA levels peaking. We postulate that the enhancement of ZEB2 expression is potentially due to chromatin reorganization in response to mechanical deformations of the nucleus. A larger critical mechanical strain triggers reorganization in human-derived stem cells, causing delayed ZEB2 upregulation compared with genetically close relatives. We test this by exploring how slightly different initial configurations of chromatin reorganize under applied strain, with greater representing less genetically-close relatives. We find that larger configuration discrepancies produce increased differences in the magnitude of chromatin displacement that rise faster than linearly yet slower than exponentially. Changes in chromatin strain and contact maps can reveal species-specific differences, aiding our understanding of how one species differs in structure from another.

q-bio.TO↗

arXiv2025

Enhancing Android Malware Detection: The Influence of ChatGPT on Decision-centric Task

With the rise of large language models, such as ChatGPT, non-decisional models have been applied to various tasks. Moreover, ChatGPT has drawn attention to the traditional decision-centric task of Android malware detection. Despite effective detection methods proposed by scholars, they face low interpretability issues. Specifically, while these methods excel in classifying applications as benign or malicious and can detect malicious behavior, they often fail to provide detailed explanations for the decisions they make. This challenge raises concerns about the reliability of existing detection schemes and questions their true ability to understand complex data. In this study, we investigate the influence of the non-decisional model, ChatGPT, on the traditional decision-centric task of Android malware detection. We choose three state-of-the-art solutions, Drebin, XMAL, and MaMaDroid, conduct a series of experiments on publicly available datasets, and carry out a comprehensive comparison and analysis. Our findings indicate that these decision-driven solutions primarily rely on statistical patterns within datasets to make decisions, rather than genuinely understanding the underlying data. In contrast, ChatGPT, as a non-decisional model, excels in providing comprehensive analysis reports, substantially enhancing interpretability. Furthermore, we conduct surveys among experienced developers. The result highlights developers' preference for ChatGPT, as it offers in-depth insights and enhances efficiency and understanding of challenges. Meanwhile, these studies and analyses offer profound insights, presenting developers with a novel perspective on Android malware detection--enhancing the reliability of detection results from a non-decisional perspective.

cs.CR↗

arXiv2025

Ordered Genetic Algorithm for Entrance Dependent Vehicle Routing Problem in Farms

Vehicle Routing Problems (VRP) are widely studied issues that play important roles in many production scenarios. We have noticed that in some practical scenarios of VRP, the size of cities and their entrances can significantly influence the optimization process. To address this, we have constructed the Entrance Dependent VRP (EDVRP) to describe such problems. We provide a mathematical formulation for the EDVRP in farms and propose an Ordered Genetic Algorithm (OGA) to solve it. The effectiveness of OGA is demonstrated through our experiments, which involve a multitude of randomly generated cases. The results indicate that OGA offers certain advantages compared to a random strategy baseline and a genetic algorithm without ordering. Furthermore, the novel operators introduced in this paper have been validated through ablation experiments, proving their effectiveness in enhancing the performance of the algorithm.

cs.RO↗

arXiv2025

Baichuan-Audio: A Unified Framework for End-to-End Speech Interaction

We introduce Baichuan-Audio, an end-to-end audio large language model that seamlessly integrates audio understanding and generation. It features a text-guided aligned speech generation mechanism, enabling real-time speech interaction with both comprehension and generation capabilities. Baichuan-Audio leverages a pre-trained ASR model, followed by multi-codebook discretization of speech at a frame rate of 12.5 Hz. This multi-codebook setup ensures that speech tokens retain both semantic and acoustic information. To further enhance modeling, an independent audio head is employed to process audio tokens, effectively capturing their unique characteristics. To mitigate the loss of intelligence during pre-training and preserve the original capabilities of the LLM, we propose a two-stage pre-training strategy that maintains language understanding while enhancing audio modeling. Following alignment, the model excels in real-time speech-based conversation and exhibits outstanding question-answering capabilities, demonstrating its versatility and efficiency. The proposed model demonstrates superior performance in real-time spoken dialogue and exhibits strong question-answering abilities. Our code, model and training data are available at https://github.com/baichuan-inc/Baichuan-Audio

cs.CL↗

arXiv2025

CL-DiffPhyCon: Closed-loop Diffusion Control of Complex Physical Systems

The control problems of complex physical systems have broad applications in science and engineering. Previous studies have shown that generative control methods based on diffusion models offer significant advantages for solving these problems. However, existing generative control approaches face challenges in both performance and efficiency when extended to the closed-loop setting, which is essential for effective control. In this paper, we propose an efficient Closed-Loop Diffusion method for Physical systems Control (CL-DiffPhyCon). By employing an asynchronous denoising framework for different physical time steps, CL-DiffPhyCon generates control signals conditioned on real-time feedback from the system with significantly reduced computational cost during sampling. Additionally, the control process could be further accelerated by incorporating fast sampling techniques, such as DDIM. We evaluate CL-DiffPhyCon on two tasks: 1D Burgers' equation control and 2D incompressible fluid control. The results demonstrate that CL-DiffPhyCon achieves superior control performance with significant improvements in sampling efficiency. The code can be found at https://github.com/AI4Science-WestlakeU/CL_DiffPhyCon.

eess.SY↗

arXiv2025

THESAURUS: Contrastive Graph Clustering by Swapping Fused Gromov-Wasserstein Couplings

Graph node clustering is a fundamental unsupervised task. Existing methods typically train an encoder through selfsupervised learning and then apply K-means to the encoder output. Some methods use this clustering result directly as the final assignment, while others initialize centroids based on this initial clustering and then finetune both the encoder and these learnable centroids. However, due to their reliance on K-means, these methods inherit its drawbacks when the cluster separability of encoder output is low, facing challenges from the Uniform Effect and Cluster Assimilation. We summarize three reasons for the low cluster separability in existing methods: (1) lack of contextual information prevents discrimination between similar nodes from different clusters; (2) training tasks are not sufficiently aligned with the downstream clustering task; (3) the cluster information in the graph structure is not appropriately exploited. To address these issues, we propose conTrastive grapH clustEring by SwApping fUsed gRomov-wasserstein coUplingS (THESAURUS). Our method introduces semantic prototypes to provide contextual information, and employs a cross-view assignment prediction pretext task that aligns well with the downstream clustering task. Additionally, it utilizes Gromov-Wasserstein Optimal Transport (GW-OT) along with the proposed prototype graph to thoroughly exploit cluster information in the graph structure. To adapt to diverse real-world data, THESAURUS updates the prototype graph and the prototype marginal distribution in OT by using momentum. Extensive experiments demonstrate that THESAURUS achieves higher cluster separability than the prior art, effectively mitigating the Uniform Effect and Cluster Assimilation issues

cs.LG↗

arXiv2025

Optical Convolutional Spectrometer

Optical spectrometers are fundamental across numerous disciplines in science and technology. However, miniaturized versions, while essential for in situ measurements, are often restricted to coarse identification of signature peaks and inadequate for metrological purposes. Here, we introduce a new class of spectrometer, leveraging the convolution theorem as its mathematical foundation. Our convolutional spectrometer offers unmatched performance for miniaturized systems and distinct structural and computational simplicity, featuring a centimeter-scale footprint for the fully packaged unit, low cost (~$10) and a 2400 cm-1 (approximately 500 nm) bandwidth. We achieve excellent precision in resolving complex spectra with sub-second sampling and processing time, demonstrating a wide range of applications from industrial and agricultural analysis to healthcare monitoring. Specifically, our spectrometer system classifies diverse solid samples, including plastics, pharmaceuticals, coffee, flour and tea, with 100% success rate, and quantifies concentrations of aqueous and organic solutions with detection accuracy surpassing commercial benchtop spectrometers. We also realize the non-invasive sensing of human biomarkers, such as skin moisture (mean absolute error; MAE = 2.49%), blood alcohol (1.70 mg/dL), blood lactate (0.81 mmol/L), and blood glucose (0.36 mmol/L), highlighting the potential of this new class of spectrometers for low-cost, high-precision, portable/wearable spectral metrology.

physics.optics↗

arXiv2025

CO2 adsorption mechanisms in hydrated silica nanopores: Insights from grand canonical Monte Carlo to classical and ab initio molecular dynamics

Understanding interfacial phenomena in confined systems is important for optimizing CO2 capture technologies. Here, we present a comprehensive investigation of CO2 adsorption in hydrated amorphous silica nanopores through an integrated computational approach combining grand canonical Monte Carlo (GCMC), classical molecular dynamics (MD), and ab initio molecular dynamics (AIMD) simulations. The excess adsorption isotherms reveal a marked hydration dependence, with CO2 uptake decreasing from 7.6 to 2.6 mmol/g as water content increases from 1 to 15 wt%. Analysis of adsorption kinetics demonstrates a distinctive bimodal process, characterized by rapid initial uptake followed by slower diffusion-limited adsorption, with the latter becoming increasingly dominant at higher hydration levels. Classical MD simulations reveal an inverse correlation between hydration and CO2 mobility, with self-diffusion coefficients decreasing across the studied hydration range. Density profile analysis indicates a hydration-induced transition in CO2 distribution from central pore regions to surface-proximate domains, accompanied by restructuring of interfacial water networks. Notably, AIMD simulations capture previously unrecognized chemical processes, including proton transfer mechanisms leading to surface silanol formation with characteristic O-O distances of 2.4-2.5 Å, and spontaneous CO2 hydration yielding carbonate species through water-mediated reaction pathways. These findings demonstrate the dual role of confined water as both a spatial competitor and reaction medium for CO2 capture, providing molecular-level insights with quantum mechanical accuracy for design of carbon capture materials.

cond-mat.mtrl-sci↗

arXiv2025

Position reconstruction and surface background model for the PandaX-4T detector

We report the position reconstruction methods and surface background model for the PandaX-4T dark matter direct search experiment. This work develops two position reconstruction algorithms: template matching (TM) method and photon acceptance function (PAF) method. Both methods determine the horizontal position of events based on the light pattern of secondary scintillation collected by the light sensors. After a comprehensive evaluation of resolution, uniformity, and robustness, the PAF method was selected for position reconstruction, while the TM method was employed for verification. The PAF method achieves a bulk event resolution of 1.0 mm and a surface event resolution of 4.4 mm for a typical $S2$ signal with a bottom charge of 1500 PE (about 14 keV). The uniformity is around 20\%. Robustness studies reveal average deviations of 5.1 mm and 8.8 mm for the commissioning run (Run0) and the first science run (Run1), respectively, due to the deactivation of certain PMTs. A data-driven surface background model is developed based on the PAF method. The surface background is estimated to be $0.09 \pm 0.06$ events for Run0 (0.54 tonne$\cdot$year) and $0.17 \pm 0.11$ events for Run1 (1.00 tonne$\cdot$year).

physics.ins-det↗

arXiv2025

A Novel Low-Background Photomultiplier Tube Developed for Xenon Based Detectors

Photomultiplier tubes (PMTs) are essential in xenon detectors like PandaX, LZ, and XENON experiments for dark matter searches and neutrino properties measurement. To minimize PMT-induced backgrounds, stringent requirements on PMT radioactivity are crucial. A novel 2-inch low-background R12699 PMT has been developed through a collaboration between the PandaX team and Hamamatsu Photonics K.K. corporation. Radioactivity measurements conducted with a high-purity germanium detector show levels of approximately 0.08 mBq/PMT for $\rm^{60}Co$ and 0.06~mBq/PMT for the $\rm^{238}U$ late chain, achieving a 15-fold reduction compared to R11410 PMT used in PandaX-4T. The radon emanation rate is below 3.2 $\rm μ$Bq/PMT (@90\% confidence level), while the surface $\rm^{210}Po$ activity is less than 18.4 $μ$Bq/cm$^2$. The electrical performance of these PMTs at cryogenic temperature was evaluated. With an optimized readout base, the gain was enhanced by 30\%, achieving an average gain of $4.23 \times 10^6$ at -1000~V and -100~$^{\circ}$C. The dark count rate averaged 2.5~Hz per channel. Compactness, low radioactivity, and robust electrical performance in the cryogenic temperature make the R12699 PMT ideal for next-generation liquid xenon detectors and other rare event searches.

physics.ins-det↗

arXiv2025

Dark Matter Search Results from 1.54 Tonne$\cdot$Year Exposure of PandaX-4T

In this letter, we report the dark matter search results from the commissioning run and the first science run of the PandaX-4T experiment. A blind analysis is carried out on the entire data set. The data processing is improved compared to previous work, unifying the low-level signal reconstruction in a wide energy range up to 120 keV. With a total exposure of 1.54 tonne$\cdot$year, no significant excess of nuclear recoil events is found. The lowest 90% confidence level exclusion on the spin-independent cross section is $1.6 \times 10^{-47}\,\mathrm{cm}^2$ at a dark matter mass of 40 GeV$/c^2$. Our results represent the most stringent constraint for a dark matter mass above 100 GeV$/c^2$.

hep-ex↗

arXiv2025

Exploring New Physics with PandaX-4T Low Energy Electronic Recoil Data

New particles beyond the standard model of particle physics, such as axions, can be effectively searched through their interactions with electrons. We use the large liquid xenon detector PandaX-4T to search for novel electronic recoil signals induced by solar axions, neutrinos with anomalous magnetic moment, axionlike particles, dark photons, and light fermionic dark matter. A detailed background model is established using the latest datasets with 1.54 $\rm ton \cdot yr$ exposure. No significant excess above the background has been observed, and we have obtained competitive constraints for axion couplings, neutrino magnetic moment, and fermionic dark matter interactions.

hep-ex↗