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Thijs Beurskens

Publications and source records attributed to Thijs Beurskens.

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Locally Correct Interleavings between Merge Trees

Temporal sequences of terrains arise in various application areas. To analyze them efficiently, one generally needs a suitable abstraction of the data as well as a method to compare and match them over time. In this paper we consider merge trees as a topological descriptor for terrains and the interleaving distance as a method to match and compare them. An interleaving between two merge trees consists of two maps, one in each direction. These maps must satisfy ancestor relations and hence introduce a ''shift'' between points and their image. An optimal interleaving minimizes the maximum shift; the interleaving distance is the value of this shift. However, to study the evolution of merge trees over time, we need not only a number but also a meaningful matching between the two trees. The two maps of an optimal interleaving induce a matching, but due to the bottleneck nature of the interleaving distance, this matching fails to capture local similarities between the trees. In this paper we hence propose a notion of local optimality for interleavings. To do so, we define the residual interleaving distance, a generalization of the interleaving distance that allows additional constraints on the maps. This allows us to define locally correct interleavings, which use a range of shifts across the two merge trees that reflect the local similarity well. We give a constructive proof that a locally correct interleaving always exists.

cs.CG

ParkView: Visualizing Monotone Interleavings

Merge trees are a powerful tool from topological data analysis that is frequently used to analyze scalar fields. The similarity between two merge trees can be captured by an interleaving: a pair of maps between the trees that jointly preserve ancestor relations in the trees. Interleavings can have a complex structure; visualizing them requires a sense of (drawing) order which is not inherent in this purely topological concept. However, in practice it is often desirable to introduce additional geometric constraints, which leads to variants such as labeled or monotone interleavings. Monotone interleavings respect a given order on the leaves of the merge trees and hence have the potential to be visualized in a clear and comprehensive manner. In this paper, we introduce ParkView: a schematic, scalable encoding for monotone interleavings. ParkView captures both maps of the interleaving using an optimal decomposition of both trees into paths and corresponding branches. We prove several structural properties of monotone interleavings, which support a sparse visual encoding using active paths and hedges that can be linked using a maximum of 6 colors for merge trees of arbitrary size. We show how to compute an optimal path-branch decomposition in linear time and illustrate ParkView on a number of real-world datasets.

cs.CG

Relating Interleaving and Fréchet Distances via Ordered Merge Trees

Merge trees are a common topological descriptor for data with a hierarchical component, such as terrains and scalar fields. The interleaving distance, in turn, is a common distance for comparing merge trees. However, the interleaving distance for merge trees is solely based on the hierarchical structure, and disregards any other geometrical or topological properties that might be present in the underlying data. Furthermore, the interleaving distance is NP-hard to compute. In this paper, we introduce a form of ordered merge trees that can capture intrinsic order present in the data. We further define a natural variant of the interleaving distance, the monotone interleaving distance, which is an order-preserving distance for ordered merge trees. Analogously to the regular interleaving distance for merge trees, we show that the monotone variant has three equivalent definitions in terms of two maps, a single map, or a labelling. Furthermore, we establish a connection between the monotone interleaving distance of ordered merge trees and the Fréchet distance of 1D curves. As a result, the monotone interleaving distance between two ordered merge trees can be computed exactly in near-quadratic time in their complexity. The connection between the monotone interleaving distance and the Fréchet distance builds a new bridge between the fields of topological data analysis, where interleaving distances are a common tool, and computational geometry, where Fréchet distances are studied extensively.

cs.CG

Waterproof: Educational Software for Learning How to Write Mathematical Proofs

In order to help students learn how to write mathematical proofs, we adapt the Coq proof assistant into an educational tool we call Waterproof. Like with other interactive theorem provers, students write out their proofs inside the software using a specific syntax, and the software provides feedback on the logical validity of each step. Waterproof consists of two components: a custom proof language that allows formal, machine-verified proofs to be written in a style that closely resembles handwritten proofs, and a custom editor that allows these proofs to be combined with formatted text to improve readability. The editor can be used for Coq documents in general, but also offers special features designed for use in education. Student input, for example, can be limited to specific parts of the document to prevent exercises from being accidentally deleted. Waterproof has been used to supplement teaching the Analysis 1 course at Eindhoven University of Technology (TU/e) for the last four years. Students started using the specific formulations of proof steps from the custom proof language in their handwritten proofs; the explicit phrasing of these sentences helped to clarify the logical structure of their arguments.

math.HO