arXiv subjects

Tianlong Chen

Publications and source records attributed to Tianlong Chen.

At least 145 records · Page 8Linked to original sources

arXiv2025

Oldie but Goodie: Re-illuminating Label Propagation on Graphs with Partially Observed Features

In real-world graphs, we often encounter missing feature situations where a few or the majority of node features, e.g., sensitive information, are missed. In such scenarios, directly utilizing Graph Neural Networks (GNNs) would yield sub-optimal results in downstream tasks such as node classification. Despite the emergence of a few GNN-based methods attempting to mitigate its missing situation, when only a few features are available, they rather perform worse than traditional structure-based models. To this end, we propose a novel framework that further illuminates the potential of classical Label Propagation (Oldie), taking advantage of Feature Propagation, especially when only a partial feature is available. Now called by GOODIE, it takes a hybrid approach to obtain embeddings from the Label Propagation branch and Feature Propagation branch. To do so, we first design a GNN-based decoder that enables the Label Propagation branch to output hidden embeddings that align with those of the FP branch. Then, GOODIE automatically captures the significance of structure and feature information thanks to the newly designed Structure-Feature Attention. Followed by a novel Pseudo-Label contrastive learning that differentiates the contribution of each positive pair within pseudo-labels originating from the LP branch, GOODIE outputs the final prediction for the unlabeled nodes. Through extensive experiments, we demonstrate that our proposed model, GOODIE, outperforms the existing state-of-the-art methods not only when only a few features are available but also in abundantly available situations. Source code of GOODIE is available at: https://github.com/SukwonYun/GOODIE.

cs.LG↗

arXiv2025

In Prospect and Retrospect: Reflective Memory Management for Long-term Personalized Dialogue Agents

Large Language Models (LLMs) have made significant progress in open-ended dialogue, yet their inability to retain and retrieve relevant information from long-term interactions limits their effectiveness in applications requiring sustained personalization. External memory mechanisms have been proposed to address this limitation, enabling LLMs to maintain conversational continuity. However, existing approaches struggle with two key challenges. First, rigid memory granularity fails to capture the natural semantic structure of conversations, leading to fragmented and incomplete representations. Second, fixed retrieval mechanisms cannot adapt to diverse dialogue contexts and user interaction patterns. In this work, we propose Reflective Memory Management (RMM), a novel mechanism for long-term dialogue agents, integrating forward- and backward-looking reflections: (1) Prospective Reflection, which dynamically summarizes interactions across granularities-utterances, turns, and sessions-into a personalized memory bank for effective future retrieval, and (2) Retrospective Reflection, which iteratively refines the retrieval in an online reinforcement learning (RL) manner based on LLMs' cited evidence. Experiments show that RMM demonstrates consistent improvement across various metrics and benchmarks. For example, RMM shows more than 10% accuracy improvement over the baseline without memory management on the LongMemEval dataset.

cs.CL↗

arXiv2025

More is Less: The Pitfalls of Multi-Model Synthetic Preference Data in DPO Safety Alignment

Aligning large language models (LLMs) with human values is an increasingly critical step in post-training. Direct Preference Optimization (DPO) has emerged as a simple, yet effective alternative to reinforcement learning from human feedback (RLHF). Synthetic preference data with its low cost and high quality enable effective alignment through single- or multi-model generated preference data. Our study reveals a striking, safety-specific phenomenon associated with DPO alignment: Although multi-model generated data enhances performance on general tasks (ARC, Hellaswag, MMLU, TruthfulQA, Winogrande) by providing diverse responses, it also tends to facilitate reward hacking during training. This can lead to a high attack success rate (ASR) when models encounter jailbreaking prompts. The issue is particularly pronounced when employing stronger models like GPT-4o or larger models in the same family to generate chosen responses paired with target model self-generated rejected responses, resulting in dramatically poorer safety outcomes. Furthermore, with respect to safety, using solely self-generated responses (single-model generation) for both chosen and rejected pairs significantly outperforms configurations that incorporate responses from stronger models, whether used directly as chosen data or as part of a multi-model response pool. We demonstrate that multi-model preference data exhibits high linear separability between chosen and rejected responses, which allows models to exploit superficial cues rather than internalizing robust safety constraints. Our experiments, conducted on models from the Llama, Mistral, and Qwen families, consistently validate these findings.

cs.AI↗

arXiv2025

SparseC-AFM: a deep learning method for fast and accurate characterization of MoS$_2$ with C-AFM

The increasing use of two-dimensional (2D) materials in nanoelectronics demands robust metrology techniques for electrical characterization, especially for large-scale production. While atomic force microscopy (AFM) techniques like conductive AFM (C-AFM) offer high accuracy, they suffer from slow data acquisition speeds due to the raster scanning process. To address this, we introduce SparseC-AFM, a deep learning model that rapidly and accurately reconstructs conductivity maps of 2D materials like MoS$_2$ from sparse C-AFM scans. Our approach is robust across various scanning modes, substrates, and experimental conditions. We report a comparison between (a) classic flow implementation, where a high pixel density C-AFM image (e.g., 15 minutes to collect) is manually parsed to extract relevant material parameters, and (b) our SparseC-AFM method, which achieves the same operation using data that requires substantially less acquisition time (e.g., under 5 minutes). SparseC-AFM enables efficient extraction of critical material parameters in MoS$_2$, including film coverage, defect density, and identification of crystalline island boundaries, edges, and cracks. We achieve over 11x reduction in acquisition time compared to manual extraction from a full-resolution C-AFM image. Moreover, we demonstrate that our model-predicted samples exhibit remarkably similar electrical properties to full-resolution data gathered using classic-flow scanning. This work represents a significant step toward translating AI-assisted 2D material characterization from laboratory research to industrial fabrication. Code and model weights are available at github.com/UNITES-Lab/sparse-cafm.

cs.CV↗

arXiv2025

SCALE: Towards Collaborative Content Analysis in Social Science with Large Language Model Agents and Human Intervention

Content analysis breaks down complex and unstructured texts into theory-informed numerical categories. Particularly, in social science, this process usually relies on multiple rounds of manual annotation, domain expert discussion, and rule-based refinement. In this paper, we introduce SCALE, a novel multi-agent framework that effectively $\underline{\textbf{S}}$imulates $\underline{\textbf{C}}$ontent $\underline{\textbf{A}}$nalysis via $\underline{\textbf{L}}$arge language model (LLM) ag$\underline{\textbf{E}}$nts. SCALE imitates key phases of content analysis, including text coding, collaborative discussion, and dynamic codebook evolution, capturing the reflective depth and adaptive discussions of human researchers. Furthermore, by integrating diverse modes of human intervention, SCALE is augmented with expert input to further enhance its performance. Extensive evaluations on real-world datasets demonstrate that SCALE achieves human-approximated performance across various complex content analysis tasks, offering an innovative potential for future social science research.

cs.AI↗

arXiv2025

SConU: Selective Conformal Uncertainty in Large Language Models

As large language models are increasingly utilized in real-world applications, guarantees of task-specific metrics are essential for their reliable deployment. Previous studies have introduced various criteria of conformal uncertainty grounded in split conformal prediction, which offer user-specified correctness coverage. However, existing frameworks often fail to identify uncertainty data outliers that violate the exchangeability assumption, leading to unbounded miscoverage rates and unactionable prediction sets. In this paper, we propose a novel approach termed Selective Conformal Uncertainty (SConU), which, for the first time, implements significance tests, by developing two conformal p-values that are instrumental in determining whether a given sample deviates from the uncertainty distribution of the calibration set at a specific manageable risk level. Our approach not only facilitates rigorous management of miscoverage rates across both single-domain and interdisciplinary contexts, but also enhances the efficiency of predictions. Furthermore, we comprehensively analyze the components of the conformal procedures, aiming to approximate conditional coverage, particularly in high-stakes question-answering tasks.

cs.CL↗

arXiv2025

COIN: Uncertainty-Guarding Selective Question Answering for Foundation Models with Provable Risk Guarantees

Uncertainty quantification (UQ) for foundation models is essential to identify and mitigate potential hallucinations in automatically generated text. However, heuristic UQ approaches lack formal guarantees for key metrics such as the false discovery rate (FDR) in selective prediction. Previous work adopts the split conformal prediction (SCP) framework to ensure desired coverage of admissible answers by constructing prediction sets, but these sets often contain incorrect candidates, limiting their practical utility. To address this, we propose COIN, an uncertainty-guarding selection framework that calibrates statistically valid thresholds to filter a single generated answer per question under user-specified FDR constraints. COIN estimates the empirical error rate on a calibration set and applies confidence interval methods such as Clopper-Pearson to establish a high-probability upper bound on the true error rate (i.e., FDR). This enables the selection of the largest uncertainty threshold that ensures FDR control on test data while significantly increasing sample retention. We demonstrate COIN's robustness in risk control, strong test-time power in retaining admissible answers, and predictive efficiency under limited calibration data across both general and multimodal text generation tasks. Furthermore, we show that employing alternative upper bound constructions and UQ strategies can further boost COIN's power performance, which underscores its extensibility and adaptability to diverse application scenarios.

cs.CL↗

arXiv2025

UProp: Investigating the Uncertainty Propagation of LLMs in Multi-Step Agentic Decision-Making

As Large Language Models (LLMs) are integrated into safety-critical applications involving sequential decision-making in the real world, it is essential to know when to trust LLM decisions. Existing LLM Uncertainty Quantification (UQ) methods are primarily designed for single-turn question-answering formats, resulting in multi-step decision-making scenarios, e.g., LLM agentic system, being underexplored. In this paper, we introduce a principled, information-theoretic framework that decomposes LLM sequential decision uncertainty into two parts: (i) internal uncertainty intrinsic to the current decision, which is focused on existing UQ methods, and (ii) extrinsic uncertainty, a Mutual-Information (MI) quantity describing how much uncertainty should be inherited from preceding decisions. We then propose UProp, an efficient and effective extrinsic uncertainty estimator that converts the direct estimation of MI to the estimation of Pointwise Mutual Information (PMI) over multiple Trajectory-Dependent Decision Processes (TDPs). UProp is evaluated over extensive multi-step decision-making benchmarks, e.g., AgentBench and HotpotQA, with state-of-the-art LLMs, e.g., GPT-4.1 and DeepSeek-V3. Experimental results demonstrate that UProp significantly outperforms existing single-turn UQ baselines equipped with thoughtful aggregation strategies. Moreover, we provide a comprehensive analysis of UProp, including sampling efficiency, potential applications, and intermediate uncertainty propagation, to demonstrate its effectiveness. Codes will be available at https://github.com/jinhaoduan/UProp.

cs.CL↗

arXiv2025

EQA-RM: A Generative Embodied Reward Model with Test-time Scaling

Reward Models (RMs), vital for large model alignment, are underexplored for complex embodied tasks like Embodied Question Answering (EQA) where nuanced evaluation of agents' spatial, temporal, and logical understanding is critical yet not considered by generic approaches. We introduce EQA-RM, a novel generative multimodal reward model specifically architected for EQA, trained via our innovative Contrastive Group Relative Policy Optimization (C-GRPO) strategy to learn fine-grained behavioral distinctions. The generative nature of EQA-RM provides interpretable, structured reward feedback (beyond simple scalars), uniquely enabling test-time scaling to dynamically adjust evaluation granularity, from concise scores to detailed critiques of reasoning and grounding, at inference without retraining. Concurrently, we introduce EQARewardBench, a new benchmark built on OpenEQA for standardized EQA reward model assessment. Demonstrating high sample efficiency, EQA-RM (fine-tuning Qwen2-VL-2B-Instruct) achieves 61.9\% accuracy on EQA-RM-Bench with only 700 samples, outperforming strong proprietary baselines, including Gemini-2.5-Flash, GPT-4o, Claude-3.5-Haiku, and open-sourced state-of-the-art models such as RoVRM and VisualPRM. The code and dataset can be found here https://github.com/UNITES-Lab/EQA-RM.

cs.LG↗

arXiv2025

A Comprehensive Survey in LLM(-Agent) Full Stack Safety: Data, Training and Deployment

The remarkable success of Large Language Models (LLMs) has illuminated a promising pathway toward achieving Artificial General Intelligence for both academic and industrial communities, owing to their unprecedented performance across various applications. As LLMs continue to gain prominence in both research and commercial domains, their security and safety implications have become a growing concern, not only for researchers and corporations but also for every nation. Currently, existing surveys on LLM safety primarily focus on specific stages of the LLM lifecycle, e.g., deployment phase or fine-tuning phase, lacking a comprehensive understanding of the entire "lifechain" of LLMs. To address this gap, this paper introduces, for the first time, the concept of "full-stack" safety to systematically consider safety issues throughout the entire process of LLM training, deployment, and eventual commercialization. Compared to the off-the-shelf LLM safety surveys, our work demonstrates several distinctive advantages: (I) Comprehensive Perspective. We define the complete LLM lifecycle as encompassing data preparation, pre-training, post-training, deployment and final commercialization. To our knowledge, this represents the first safety survey to encompass the entire lifecycle of LLMs. (II) Extensive Literature Support. Our research is grounded in an exhaustive review of over 800+ papers, ensuring comprehensive coverage and systematic organization of security issues within a more holistic understanding. (III) Unique Insights. Through systematic literature analysis, we have developed reliable roadmaps and perspectives for each chapter. Our work identifies promising research directions, including safety in data generation, alignment techniques, model editing, and LLM-based agent systems. These insights provide valuable guidance for researchers pursuing future work in this field.

cs.CR↗

arXiv2025

Spatial Coordinates as a Cell Language: A Multi-Sentence Framework for Imaging Mass Cytometry Analysis

Image mass cytometry (IMC) enables high-dimensional spatial profiling by combining mass cytometry's analytical power with spatial distributions of cell phenotypes. Recent studies leverage large language models (LLMs) to extract cell states by translating gene or protein expression into biological context. However, existing single-cell LLMs face two major challenges: (1) Integration of spatial information: they struggle to generalize spatial coordinates and effectively encode spatial context as text, and (2) Treating each cell independently: they overlook cell-cell interactions, limiting their ability to capture biological relationships. To address these limitations, we propose Spatial2Sentence, a novel framework that integrates single-cell expression and spatial information into natural language using a multi-sentence approach. Spatial2Sentence constructs expression similarity and distance matrices, pairing spatially adjacent and expressionally similar cells as positive pairs while using distant and dissimilar cells as negatives. These multi-sentence representations enable LLMs to learn cellular interactions in both expression and spatial contexts. Equipped with multi-task learning, Spatial2Sentence outperforms existing single-cell LLMs on preprocessed IMC datasets, improving cell-type classification by 5.98% and clinical status prediction by 4.18% on the diabetes dataset while enhancing interpretability. The source code can be found here: https://github.com/UNITES-Lab/Spatial2Sentence.

cs.CL↗

arXiv2025

IndustryEQA: Pushing the Frontiers of Embodied Question Answering in Industrial Scenarios

Existing Embodied Question Answering (EQA) benchmarks primarily focus on household environments, often overlooking safety-critical aspects and reasoning processes pertinent to industrial settings. This drawback limits the evaluation of agent readiness for real-world industrial applications. To bridge this, we introduce IndustryEQA, the first benchmark dedicated to evaluating embodied agent capabilities within safety-critical warehouse scenarios. Built upon the NVIDIA Isaac Sim platform, IndustryEQA provides high-fidelity episodic memory videos featuring diverse industrial assets, dynamic human agents, and carefully designed hazardous situations inspired by real-world safety guidelines. The benchmark includes rich annotations covering six categories: equipment safety, human safety, object recognition, attribute recognition, temporal understanding, and spatial understanding. Besides, it also provides extra reasoning evaluation based on these categories. Specifically, it comprises 971 question-answer pairs generated from small warehouse and 373 pairs from large ones, incorporating scenarios with and without human. We further propose a comprehensive evaluation framework, including various baseline models, to assess their general perception and reasoning abilities in industrial environments. IndustryEQA aims to steer EQA research towards developing more robust, safety-aware, and practically applicable embodied agents for complex industrial environments. Benchmark and codes are available.

cs.CV↗

arXiv2025

I2MoE: Interpretable Multimodal Interaction-aware Mixture-of-Experts

Modality fusion is a cornerstone of multimodal learning, enabling information integration from diverse data sources. However, vanilla fusion methods are limited by (1) inability to account for heterogeneous interactions between modalities and (2) lack of interpretability in uncovering the multimodal interactions inherent in the data. To this end, we propose I2MoE (Interpretable Multimodal Interaction-aware Mixture of Experts), an end-to-end MoE framework designed to enhance modality fusion by explicitly modeling diverse multimodal interactions, as well as providing interpretation on a local and global level. First, I2MoE utilizes different interaction experts with weakly supervised interaction losses to learn multimodal interactions in a data-driven way. Second, I2MoE deploys a reweighting model that assigns importance scores for the output of each interaction expert, which offers sample-level and dataset-level interpretation. Extensive evaluation of medical and general multimodal datasets shows that I2MoE is flexible enough to be combined with different fusion techniques, consistently improves task performance, and provides interpretation across various real-world scenarios. Code is available at https://github.com/Raina-Xin/I2MoE.

cs.LG↗

arXiv2025

Occult: Optimizing Collaborative Communication across Experts for Accelerated Parallel MoE Training and Inference

Mixture-of-experts (MoE) architectures could achieve impressive computational efficiency with expert parallelism, which relies heavily on all-to-all communication across devices. Unfortunately, such communication overhead typically constitutes a significant portion of the total runtime, hampering the scalability of distributed training and inference for modern MoE models (consuming over $40\%$ runtime in large-scale training). In this paper, we first define collaborative communication to illustrate this intrinsic limitation, and then propose system- and algorithm-level innovations to reduce communication costs. Specifically, given a pair of experts co-activated by one token, we call them "collaborated", which comprises $2$ cases as intra- and inter-collaboration, depending on whether they are kept on the same device. Our pilot investigations reveal that augmenting the proportion of intra-collaboration can accelerate expert parallelism at scale. It motivates us to strategically optimize collaborative communication for accelerated MoE training and inference, dubbed Occult. Our designs are capable of either delivering exact results with reduced communication cost or controllably minimizing the cost with collaboration pruning, materialized by modified fine-tuning. Comprehensive experiments on various MoE-LLMs demonstrate that Occult can be faster than popular state-of-the-art inference or training frameworks (more than $1.5\times$ speed up across multiple tasks and models) with comparable or superior quality compared to the standard fine-tuning. Code is available at $\href{https://github.com/UNITES-Lab/Occult}{https://github.com/UNITES-Lab/Occult}$.

cs.LG↗

arXiv2025

Unlearning Sensitive Information in Multimodal LLMs: Benchmark and Attack-Defense Evaluation

LLMs trained on massive datasets may inadvertently acquire sensitive information such as personal details and potentially harmful content. This risk is further heightened in multimodal LLMs as they integrate information from multiple modalities (image and text). Adversaries can exploit this knowledge through multimodal prompts to extract sensitive details. Evaluating how effectively MLLMs can forget such information (targeted unlearning) necessitates the creation of high-quality, well-annotated image-text pairs. While prior work on unlearning has focused on text, multimodal unlearning remains underexplored. To address this gap, we first introduce a multimodal unlearning benchmark, UnLOK-VQA (Unlearning Outside Knowledge VQA), as well as an attack-and-defense framework to evaluate methods for deleting specific multimodal knowledge from MLLMs. We extend a visual question-answering dataset using an automated pipeline that generates varying-proximity samples for testing generalization and specificity, followed by manual filtering for maintaining high quality. We then evaluate six defense objectives against seven attacks (four whitebox, three blackbox), including a novel whitebox method leveraging interpretability of hidden states. Our results show multimodal attacks outperform text- or image-only ones, and that the most effective defense removes answer information from internal model states. Additionally, larger models exhibit greater post-editing robustness, suggesting that scale enhances safety. UnLOK-VQA provides a rigorous benchmark for advancing unlearning in MLLMs.

cs.CL↗

arXiv2025

Q-Newton: Hybrid Quantum-Classical Scheduling for Accelerating Neural Network Training with Newton's Gradient Descent

Optimization techniques in deep learning are predominantly led by first-order gradient methodologies, such as SGD. However, neural network training can greatly benefit from the rapid convergence characteristics of second-order optimization. Newton's GD stands out in this category, by rescaling the gradient using the inverse Hessian. Nevertheless, one of its major bottlenecks is matrix inversion, which is notably time-consuming in $O(N^3)$ time with weak scalability. Matrix inversion can be translated into solving a series of linear equations. Given that quantum linear solver algorithms (QLSAs), leveraging the principles of quantum superposition and entanglement, can operate within a $\text{polylog}(N)$ time frame, they present a promising approach with exponential acceleration. Specifically, one of the most recent QLSAs demonstrates a complexity scaling of $O(d\cdotκ\log(N\cdotκ/ε))$, depending on: {size~$N$, condition number~$κ$, error tolerance~$ε$, quantum oracle sparsity~$d$} of the matrix. However, this also implies that their potential exponential advantage may be hindered by certain properties (i.e. $κ$ and $d$). We propose Q-Newton, a hybrid quantum-classical scheduler for accelerating neural network training with Newton's GD. Q-Newton utilizes a streamlined scheduling module that coordinates between quantum and classical linear solvers, by estimating & reducing $κ$ and constructing $d$ for the quantum solver. Our evaluation showcases the potential for Q-Newton to significantly reduce the total training time compared to commonly used optimizers like SGD. We hypothesize a future scenario where the gate time of quantum machines is reduced, possibly realized by attoseconds physics. Our evaluation establishes an ambitious and promising target for the evolution of quantum computing.

quant-ph↗

arXiv2025

Advancing MoE Efficiency: A Collaboration-Constrained Routing (C2R) Strategy for Better Expert Parallelism Design

Mixture-of-Experts (MoE) has successfully scaled up models while maintaining nearly constant computing costs. By employing a gating network to route input tokens, it selectively activates a subset of expert networks to process the corresponding token embeddings. However, in practice, the efficiency of MoE is challenging to achieve due to two key reasons: imbalanced expert activation, which leads to substantial idle time during model or expert parallelism, and insufficient capacity utilization; massive communication overhead, induced by numerous expert routing combinations in expert parallelism at the system level. Previous works typically formulate it as the load imbalance issue characterized by the gating network favoring certain experts over others or attribute it to static execution which fails to adapt to the dynamic expert workload at runtime. In this paper, we exploit it from a brand new perspective, a higher-order view and analysis of MoE routing policies: expert collaboration and specialization where some experts tend to activate broadly with others (collaborative), while others are more likely to activate only with a specific subset of experts (specialized). Our experiments reveal that most experts tend to be overly collaborative, leading to increased communication overhead from repeatedly sending tokens to different accelerators. To this end, we propose a novel collaboration-constrained routing (C2R) strategy to encourage more specialized expert groups, as well as to improve expert utilization, and present an efficient implementation of MoE that further leverages expert specialization. We achieve an average performance improvement of 0.51% and 0.33% on LLaMA-MoE and Qwen-MoE respectively across ten downstream NLP benchmarks, and reduce the all2all communication costs between GPUs, bringing an extra 20%-30% total running time savings on top of the existing SoTA, i.e. MegaBlocks.

cs.LG↗

arXiv2025

Efficient MAP Estimation of LLM Judgment Performance with Prior Transfer

LLM ensembles are widely used for LLM judges. However, how to estimate their accuracy, especially in an efficient way, is unknown. In this paper, we present a principled maximum a posteriori (MAP) framework for an economical and precise estimation of the performance of LLM ensemble judgment. We first propose a mixture of Beta-Binomial distributions to model the judgment distribution, revising from the vanilla Binomial distribution. Next, we introduce a conformal prediction-driven approach that enables adaptive stopping during iterative sampling to balance accuracy with efficiency. Furthermore, we design a prior transfer mechanism that utilizes learned distributions on open-source datasets to improve estimation on a target dataset when only scarce annotations are available. Finally, we present BetaConform, a framework that integrates our distribution assumption, adaptive stopping, and the prior transfer mechanism to deliver a theoretically guaranteed distribution estimation of LLM ensemble judgment with minimum labeled samples. BetaConform is also validated empirically. For instance, with only 10 samples from the TruthfulQA dataset, for a Llama ensembled judge, BetaConform gauges its performance with error margin as small as 3.37%.

cs.LG↗