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Timo A. Nieminen

Publications and source records attributed to Timo A. Nieminen.

At least 19 recordsLinked to original sources
arXiv2021

Controlled transfer of transverse optical angular momentum to optically trapped birefringent particles

We report on the observation and measurement of the transfer of transverse angular momentum to birefringent particles several wavelengths in size. A trapped birefringent particle is much larger than the nano-particles systems for which transverse angular momentum was previously investigated. The larger birefringent particle interacts more strongly with both the trapping beam and fluid surrounding it. This technique could be used to transfer transverse angular momentum for studies of diverse micro-systems. Thus, it can be used for investigation of the dynamics of complex fluids in 3D as well as for shear on cell mono-layers. The trapping of such a particle with highly focused light is complex and can lead to the emergence of effects such as spin--orbit coupling. We estimate the transfer of spin angular momentum using Stokes measurements. We outline the physics behind the construction of the beam used to control the particles, perform quantitative measurement of transverse spin angular momentum transfer, as well as demonstrate the generation of fluid flow around multiple rotation axes.

physics.optics↗
arXiv2020

Machine learning reveals complex behaviours in optically trapped particles

Since their invention in the 1980s [1], optical tweezers have found a wide range of applications, from biophotonics and mechanobiology to microscopy and optomechanics [2, 3, 4, 5]. Simulations of the motion of microscopic particles held by optical tweezers are often required to explore complex phenomena and to interpret experimental data [6, 7, 8, 9]. For the sake of computational efficiency, these simulations usually model the optical tweezers as an harmonic potential [10, 11]. However, more physically-accurate optical-scattering models [12, 13, 14, 15] are required to accurately model more onerous systems; this is especially true for optical traps generated with complex fields [16, 17, 18, 19]. Although accurate, these models tend to be prohibitively slow for problems with more than one or two degrees of freedom (DoF) [20], which has limited their broad adoption. Here, we demonstrate that machine learning permits one to combine the speed of the harmonic model with the accuracy of optical-scattering models. Specifically, we show that a neural network can be trained to rapidly and accurately predict the optical forces acting on a microscopic particle. We demonstrate the utility of this approach on two phenomena that are prohibitively slow to accurately simulate otherwise: the escape dynamics of swelling microparticles in an optical trap, and the rotation rates of particles in a superposition of beams with opposite orbital angular momenta. Thanks to its high speed and accuracy, this method can greatly enhance the range of phenomena that can be efficiently simulated and studied.

physics.optics↗
arXiv2019

Orientation of Swimming Cells with Annular Beam Optical Tweezers

Optical tweezers are a versatile tool that can be used to manipulate small particles including both motile and non-motile bacteria and cells. The orientation of a non-spherical particle within a beam depends on the shape of the particle and the shape of the light field. By using multiple beams, sculpted light fields or dynamically changing beams, it is possible to control the orientation of certain particles. In this paper we discuss the orientation of the rod-shaped bacteria Escherichia coli (E. coli) using dynamically shifting annular beam optical tweezers. We begin with examples of different beams used for the orientation of rod-shaped particles. We discuss the differences between orientation of motile and non-motile particles, and explore annular beams and the circumstances when they may be beneficial for manipulation of non-spherical particles or cells. Using simulations we map out the trajectory the E. coli takes. Estimating the trap stiffness along the trajectory gives us an insight into how stable an intermediate rotation is with respect to the desired orientation. Using this method, we predict and experimentally verify the change in the orientation of motile E. coli from vertical to near-horizontal with only one intermediate step. The method is not specific to exploring the orientation of particles and could be easily extended to quantify the stability of an arbitrary particle trajectory.

physics.optics↗
arXiv2019

Wall effects of eccentric spheres machine learning for convenient computation

In confined systems, such as the inside of a biological cell, the outer boundary or wall can affect the dynamics of internal particles. In many cases of interest both the internal particle and outer wall are approximately spherical. Therefore, quantifying the wall effects from an outer spherical boundary on the motion of an internal eccentric sphere is very useful. However, when the two spheres are not concentric, the problem becomes non-trivial. In this paper we improve existing analytical methods to evaluate these wall effects and then train a feed-forward artificial neural network within a broader model. The final model generally performed with $\sim 0.001\%$ error within the training domain and $\sim 0.05\%$ when the outer spherical wall was extrapolated to an infinite plane. Through this model, the wall effects of an outer spherical boundary on the arbitrary motion of an internal sphere for all experimentally achievable configurations can now be conveniently and efficiently determined.

physics.flu-dyn↗
arXiv2017

Tiered Assessment in Upper-Level Undergraduate Physics

Tiered assessment is a differentiated assessment strategy where students can choose to attempt advanced assessment tasks. We discuss the use of tiered assessment in second and third year electromagnetics courses.

physics.ed-ph↗
arXiv2017

Solar Line Asymmetries: Modelling the Effect of Granulation on the Solar Spectrum

A parametric model of granulation employing a small number of parameters was developed. Synthetic spectra calculated using this model closely match observed spectra and, in particular, reproduce the asymmetries observed in spectral lines. Both the microturbulent motions and the large-scale flow velocity decrease exponentially with a scale height of 368 km as the height within the photosphere increases. The model agrees with observations of the solar granulation (from which it was derived). The horizontal motions associated with granulation were found and used to calculate spectra emergent away from disk centre. These calculated spectra were compared to observed spectra, with the agreement supporting the accuracy of the granular model. Also in the course of this work, the Brueckner-O'Mara damping theory was found to predict damping constants accurately. The photospheric abundances of a number of elements were determined. The abundance obtained for iron agrees with the meteoric iron abundance. Astrophysical f-values for some lines were also determined.

astro-ph.SR↗
arXiv2017

Theory and practice of simulation of optical tweezers

Computational modelling has made many useful contributions to the field of optical tweezers. One aspect in which it can be applied is the simulation of the dynamics of particles in optical tweezers. This can be useful for systems with many degrees of freedom, and for the simulation of experiments. While modelling of the optical force is a prerequisite for simulation of the motion of particles in optical traps, non-optical forces must also be included; the most important are usually Brownian motion and viscous drag. We discuss some applications and examples of such simulations. We review the theory and practical principles of simulation of optical tweezers, including the choice of method of calculation of optical force, numerical solution of the equations of motion of the particle, and finish with a discussion of a range of open problems.

physics.optics↗
arXiv2017

Visual guide to optical tweezers

It is common to introduce optical tweezers using either geometric optics for large particles or the Rayleigh approximation for very small particles. These approaches are successful at conveying the key ideas behind optical tweezers in their respective regimes. However, they are insufficient for modelling particles of intermediate size and large particles with small features. For this, a full field approach provides greater insight into the mechanisms involved in trapping. The advances in computational capability over the last decade has led to better modelling and understanding of optical tweezers. Problems that were previously difficult to model computationally can now be solved using a variety of methods on modern systems. These advances in computational power allow for full field solutions to be visualised, leading to increased understanding of the fields and behaviour in various scenarios. In this paper we describe the operation of optical tweezers using full field simulations calculated using the finite difference time domain method. We use these simulations to visually illustrate various situations relevant to optical tweezers, from the basic operation of optical tweezers, to engineered particles and evanescent fields.

physics.optics↗
arXiv2017

Active rotational and translational microrheology beyond the linear spring regime

Active particle tracking microrheometers have the potential to perform accurate broad-band measurements of viscoelasticity within microscopic systems. Generally, their largest possible precision is limited by Brownian motion and low frequency changes to the system. The signal to noise ratio is usually improved by increasing the size of the driven motion compared to the Brownian as well as averaging over repeated measurements. New theory is presented here which gives the complex shear modulus when the motion of a spherical particle is driven by non-linear forces. In some scenarios error can be further reduced by applying a variable transformation which linearises the equation of motion. This allows normalisation which eliminates low frequency drift in the particle's equilibrium position. Using this method will easily increase the signal strength enough to significantly reduce the measurement time for the same error. Thus the method is more conducive to measuring viscoelasticity in slowly changing microscopic systems, such as a living cell.

physics.flu-dyn↗
arXiv2011

The Asian war bow

The bow is one of the earliest complex machines, a prime example of the storage and transfer of energy. The physics of the bow illuminates compromises and design choices made in Asian military archery.

physics.hist-ph↗
arXiv2009

Momentum of an electromagnetic wave in dielectric media

Almost a hundred years ago, two different expressions were proposed for the energy--momentum tensor of an electromagnetic wave in a dielectric. Minkowski's tensor predicted an increase in the linear momentum of the wave on entering a dielectric medium, whereas Abraham's tensor predicted its decrease. Theoretical arguments were advanced in favour of both sides, and experiments proved incapable of distinguishing between the two. Yet more forms were proposed, each with their advocates who considered the form that they were proposing to be the one true tensor. This paper reviews the debate and its eventual conclusion: that no electromagnetic wave energy--momentum tensor is complete on its own. When the appropriate accompanying energy--momentum tensor for the material medium is also considered, experimental predictions of all the various proposed tensors will always be the same, and the preferred form is therefore effectively a matter of personal choice.

physics.class-ph↗
arXiv2008

Symmetry and the generation and measurement of optical torque

A key element in the generation of optical torque in optical traps, which occurs when electromagnetic angular momentum is transferred from the trapping beam to the trapped particle by scattering, is the symmetries of the scattering particle and the trapping beam. We discuss the effect of such symmetries on the generation and measurement of optical torque in optical tweezers, and some consequent general principles for the design of optically-driven micromachines.

physics.optics↗
arXiv2008

T-matrix calculation via discrete-dipole approximation, point matching and exploiting symmetry

We present a method of incorporating the discrete dipole approximation (DDA) method with the point matching method to formulate the T-matrix for modeling arbitrarily shaped micro-sized objects. The \emph{T}-matrix elements are calculated using point matching between fields calculated using vector spherical wave functions and DDA. When applied to microrotors, their discrete rotational and mirror symmetries can be exploited to reduce memory usage and calculation time by orders of magnitude; a number of optimization methods can be employed based on the knowledge of the relationship between the azimuthal mode and phase at each discrete rotational point, and mode redundancy from Floquet's theorem. A 'reduced-mode' T-matrix can also be calculated if the illumination conditions are known.

physics.optics↗
arXiv2008

Fabrication of micro-structures for optically driven micromachines using two-photon photopolymerization of UV curing resins

Two-photon photopolymerization of UV curing resins is an attractive method for the fabrication of microscopic transparent objects with size in the tens of micrometers range. We have been using this method to produce three-dimensional structures for optical micromanipulation, in an optical system based on a femtosecond laser. By carefully adjusting the laser power and the exposure time we were able to create micro-objects with well-defined 3D features and with resolution below the diffraction limit of light. We discuss the performance and capabilities of a microfabrication system, with some examples of its products.

physics.optics↗
arXiv2007

Picolitre viscometry using optically rotated particles

Important aspects in the field of microrheology are the studies of the viscosity of fluids within structures with micron dimensions and fluid samples where only microlitre volumes are available. We have quantitatively investigated the performance and accuracy of a microviscometer based on rotating optical tweezers, that requires as little as one microlitre of sample. We have characterised our microviscometer, including effects due to heating, and demonstrated its ability to perform measurements over a large dynamic range of viscosities (at least two orders of magnitude). We have also inserted a probe particle through the membrane of a cell and measured the viscosity of the intramembranous contents. Viscosity measurements of tears have also been made with our microviscometer, which demonstrate its potential use to study un-stimulated eye fluid.

physics.optics↗
arXiv2007

Visualisation of Cherenkov Radiation and the Fields of a Moving Charge

For some physics students, the concept of a particle travelling faster than the speed of light holds endless fascination, and Cherenkov radiation is a visible consequence of a charged particle travelling through a medium at locally superluminal velocities. The Heaviside--Feynman equations for calculating the magnetic and electric fields of a moving charge have been known for many decades, but it is only recently that the computing power to plot the fields of such a particle has become readily available for student use. This article investigates and illustrates the calculation of Maxwell's D field in homogeneous isotropic media for arbitrary, including superluminal, constant velocity, and uses the results as a basis for discussing energy transfer in the electromagnetic field.

physics.ed-ph↗
arXiv2007

Refractometry of organosilica microspheres

The refractive index of novel organosilica (nano/micro)material is determined using two methods. The first method is based on analysis of optical extinction efficiency of organosilica beads versus wavelength, which is obtained by a standard laboratory spectrometer. The second method relies on the measurable trapping potential of these beads in the focused light beam (laser tweezers). Polystyrene beads were used to test these methods, and the determined dispersion curves of refractive index values have been found accurate. The refractive index of organosilica beads has been determined to range from 1.60-1.51 over the wavelength range of 300-1100 nm.

physics.optics↗