arXiv subjects

Tom Rainforth

Publications and source records attributed to Tom Rainforth.

At least 19 recordsLinked to original sources

arXiv2026

Bayesian Experimental Design via Score Matching

Policy-based approaches to Bayesian experimental design (BED) allow the learning of deep policy networks that adaptively make intelligent design decisions based on previously collected data. However, the training of such policies is often held back by a fundamental challenge: the double intractability of the expected information gain (EIG). This necessitates expensive or complex approximations that restrict the effort one can invest in optimising the policy itself. To address this, we show that the double intractability of the EIG can be isolated from the policy learning by first solving a score matching problem that is independent of the policy used, then using the learned score approximation to train the policy in a singly intractable manner. This turns the key multiplicative cost into an additive one and reduces the computational burden on the policy training itself, making it far cheaper to train the policy multiple times when needed, e.g. for architecture search, hyperparameter tuning, or avoiding local optima. In our experiments we train multiple competitive policies without inducing a multiplicative cost in likelihood evaluations, which can increase performance by allowing us to select the best policy even without performing hyperparameter or architecture searches.

stat.ML↗

arXiv2026

Prediction-Powered Active Testing

Active testing provides a label--efficient approach to risk estimation by adaptively selecting which test points should be labelled. However, existing estimators fail to exploit the informative predictions of powerful black--box models, even though such predictions are increasingly available in settings where labels remain expensive. To address this, we propose \textbf{Prediction--Powered Active Testing (PPAT)}, a novel label--efficient risk estimation framework that combines the unbiased LURE estimator \citep{farquhar2021statistical} with a prediction--powered control variate. Rather than using proxy predictions as biased pseudo--labels, PPAT uses them to residualise the loss, preserving unbiasedness while reducing variance. Beyond the estimator itself, PPAT also changes which points should be acquired: we derive oracle and practical surrogate--based acquisition rules tailored to reducing the variance of our estimator. Moreover, we establish asymptotic normality for PPAT, yielding asymptotically valid confidence intervals and thus a principled estimate of the uncertainty around our estimates. Across tabular regression and image--classification tasks, PPAT outperforms existing methods in risk estimation, while its confidence intervals attain the target coverage with substantially fewer labels and smaller widths.

stat.ML↗

arXiv2026

Efficient Adaptive Data Acquisition via Pretrained Belief Representations

Learning effective policies for adaptive data acquisition remains challenging: posterior-based methods rely on surrogate models and posterior approximations that can be misspecified or biased, while direct policy-learning methods map from historical observations and fail to exploit available model representations, making learning harder. We introduce policy learning with belief representations (POLAR), based on the insight that optimal data acquisition depends on the observation history only through a sufficient belief state. Specifically, POLAR decouples representation learning from policy learning by leveraging pretrained predictive foundation models as belief-state encoders, training a policy head on top of their representations. This yields a simple, unified amortised policy learning framework for Bayesian experimental design, Bayesian optimisation, and active learning, differing only in the task-specific utility used to train the policy. Empirically, we find that POLAR outperforms state-of-the-art amortised methods across diverse tasks while requiring far fewer training samples, demonstrating a significant step in the scalability and efficiency of amortised data acquisition.

cs.LG↗

arXiv2026

FairBED: A Bayesian Experimental Design Approach to Gathering Fairer Data

Frameworks for ensuring fairness in machine learning typically focus on learning fair models from existing data. But this endeavor is often undermined by biases already present in that data. We therefore look to modify the data acquisition process itself to help gather fairer data that is inherently more suitable for training fair predictors. To this end, we introduce FairBED, which provides novel formulations for quantifying the fairness of datasets themselves based on the idea that fair datasets should be uninformative about sensitive attributes. We then use this to construct practical fairness-aware Bayesian experimental design (BED) objectives that maximize expected information gain about the target quantity of interest while minimizing expected information gain about sensitive attributes. We further derive a theoretical link between FairBED and demographic parity, and show empirically that models trained on data gathered using FairBED provide improved fairness-accuracy trade-offs compared to randomly acquired data and conventional BED.

stat.ML↗

arXiv2026

Action-BED: Task-Driven Bayesian Experimental Design with Singly Intractable Objectives

Bayesian experimental design (BED) has traditionally been based on maximising expected uncertainty reductions from prior to posterior. A major shortfall of this approach is that it leads to doubly intractable objectives that are difficult to optimise, while customising them to particular downstream tasks of interest can also be difficult. Following first principles decision theory, we demonstrate that BED can alternatively be formulated in terms of an expected future loss (EFL) on downstream actions, providing a simple and naturally task-driven framework. Critically, we then show that all such EFLs can be rearranged into singly intractable objectives that can be jointly optimised with respect to both the design policy and a downstream action policy using stochastic gradients, an approach we refer to as ACTION-BED. This formulation further sidesteps the need for any explicit posterior or marginal likelihood estimation and is naturally implicit, requiring only the ability to sample from the joint model over model parameters and data, and evaluate the downstream loss function. It thus allows design policies to be learned more effectively, efficiently, and simply than existing methods, while providing easy customisation to different downstream tasks and losses.

stat.ML↗

arXiv2026

Loss-Driven Bayesian Active Learning

The central goal of active learning is to gather data that maximises downstream predictive performance, but popular approaches have limited flexibility in customising this data acquisition to different downstream problems and losses. We propose a rigorous loss-driven approach to Bayesian active learning that allows data acquisition to directly target the loss associated with a given decision problem. In particular, we show how any loss can be used to derive a unique objective for optimal data acquisition. Critically, we then show that any loss taking the form of a weighted Bregman divergence permits analytic computation of a central component of its corresponding objective, making the approach applicable in practice. In regression and classification experiments with a range of different losses, we find our approach reduces test losses relative to existing techniques.

cs.LG↗

arXiv2025

Kosmos: An AI Scientist for Autonomous Discovery

Data-driven scientific discovery requires iterative cycles of literature search, hypothesis generation, and data analysis. Substantial progress has been made towards AI agents that can automate scientific research, but all such agents remain limited in the number of actions they can take before losing coherence, thus limiting the depth of their findings. Here we present Kosmos, an AI scientist that automates data-driven discovery. Given an open-ended objective and a dataset, Kosmos runs for up to 12 hours performing cycles of parallel data analysis, literature search, and hypothesis generation before synthesizing discoveries into scientific reports. Unlike prior systems, Kosmos uses a structured world model to share information between a data analysis agent and a literature search agent. The world model enables Kosmos to coherently pursue the specified objective over 200 agent rollouts, collectively executing an average of 42,000 lines of code and reading 1,500 papers per run. Kosmos cites all statements in its reports with code or primary literature, ensuring its reasoning is traceable. Independent scientists found 79.4% of statements in Kosmos reports to be accurate, and collaborators reported that a single 20-cycle Kosmos run performed the equivalent of 6 months of their own research time on average. Furthermore, collaborators reported that the number of valuable scientific findings generated scales linearly with Kosmos cycles (tested up to 20 cycles). We highlight seven discoveries made by Kosmos that span metabolomics, materials science, neuroscience, and statistical genetics. Three discoveries independently reproduce findings from preprinted or unpublished manuscripts that were not accessed by Kosmos at runtime, while four make novel contributions to the scientific literature.

cs.AI↗

arXiv2025

Active Learning with Task-Driven Representations for Messy Pools

Active learning has the potential to be especially useful for messy, uncurated pools where datapoints vary in relevance to the target task. However, state-of-the-art approaches to this problem currently rely on using fixed, unsupervised representations of the pool, focusing on modifying the acquisition function instead. We show that this model setup can undermine their effectiveness at dealing with messy pools, as such representations can fail to capture important information relevant to the task. To address this, we propose using task-driven representations that are periodically updated during the active learning process using the previously collected labels. We introduce two specific strategies for learning these representations, one based on directly learning semi-supervised representations and the other based on supervised fine-tuning of an initial unsupervised representation. We find that both significantly improve empirical performance over using unsupervised or pretrained representations.

cs.LG↗

arXiv2025

A Geometric Approach to Optimal Experimental Design

We introduce a novel geometric framework for optimal experimental design (OED). Traditional OED approaches, such as those based on mutual information, rely explicitly on probability densities, leading to restrictive invariance properties. To address these limitations, we propose the mutual transport dependence (MTD), a measure of statistical dependence grounded in optimal transport theory which provides a geometric objective for optimizing designs. Unlike conventional approaches, the MTD can be tailored to specific downstream estimation problems by choosing appropriate geometries on the underlying spaces. We demonstrate that our framework produces high-quality designs while offering a flexible alternative to standard information-theoretic techniques.

stat.ML↗

arXiv2025

BED-LLM: Intelligent Information Gathering with LLMs and Bayesian Experimental Design

We propose a general-purpose approach for improving the ability of large language models (LLMs) to intelligently and adaptively gather information from a user or other external source using the framework of sequential Bayesian experimental design (BED). This enables LLMs to act as effective multi-turn conversational agents and interactively interface with external environments. Our approach, which we call BED-LLM (Bayesian experimental design with large language models), is based on iteratively choosing questions or queries that maximize the expected information gain (EIG) with respect to a variable of interest given the responses gathered previously. We show how this EIG can be formulated (and then estimated) in a principled way using a probabilistic model derived from the LLM's predictive distributions and provide detailed insights into key decisions in its construction and updating procedure. We find that BED-LLM achieves substantial gains in performance across a wide range of tests based on the 20 Questions game and using the LLM to actively infer user preferences, compared to purely prompting-based design generation and other adaptive design strategies.

cs.CL↗

arXiv2025

Scaling Up Active Testing to Large Language Models

Active testing enables label-efficient evaluation of predictive models through careful data acquisition, but it can pose a significant computational cost. We identify cost-saving measures that enable active testing to be scaled up to large language models (LLMs). In particular we show that the surrogate model used to guide data acquisition can be constructed cheaply using in-context learning, does not require updating within an active-testing loop, and can be smaller than the target model. We even find we can make good data-acquisition decisions without making predictions with the target model. As a result we are able to achieve much more accurate evaluations of LLM performance relative to using randomly acquired data. We additionally introduce a bootstrap estimator of evaluation error, which we show to be a useful indicator of how well active testing is working within a single run.

cs.LG↗

arXiv2025

Prediction-Oriented Subsampling from Data Streams

Data is often generated in streams, with new observations arriving over time. A key challenge for learning models from data streams is capturing relevant information while keeping computational costs manageable. We explore intelligent data subsampling for offline learning, and argue for an information-theoretic method centred on reducing uncertainty in downstream predictions of interest. Empirically, we demonstrate that this prediction-oriented approach performs better than a previously proposed information-theoretic technique on two widely studied problems. At the same time, we highlight that reliably achieving strong performance in practice requires careful model design.

cs.LG↗

arXiv2025

Step-DAD: Semi-Amortized Policy-Based Bayesian Experimental Design

We develop a semi-amortized, policy-based, approach to Bayesian experimental design (BED) called Stepwise Deep Adaptive Design (Step-DAD). Like existing, fully amortized, policy-based BED approaches, Step-DAD trains a design policy upfront before the experiment. However, rather than keeping this policy fixed, Step-DAD periodically updates it as data is gathered, refining it to the particular experimental instance. This test-time adaptation improves both the flexibility and the robustness of the design strategy compared with existing approaches. Empirically, Step-DAD consistently demonstrates superior decision-making and robustness compared with current state-of-the-art BED methods.

stat.ML↗

arXiv2025

Shh, don't say that! Domain Certification in LLMs

Large language models (LLMs) are often deployed to perform constrained tasks, with narrow domains. For example, customer support bots can be built on top of LLMs, relying on their broad language understanding and capabilities to enhance performance. However, these LLMs are adversarially susceptible, potentially generating outputs outside the intended domain. To formalize, assess, and mitigate this risk, we introduce domain certification; a guarantee that accurately characterizes the out-of-domain behavior of language models. We then propose a simple yet effective approach, which we call VALID that provides adversarial bounds as a certificate. Finally, we evaluate our method across a diverse set of datasets, demonstrating that it yields meaningful certificates, which bound the probability of out-of-domain samples tightly with minimum penalty to refusal behavior.

cs.CL↗

arXiv2024

Rethinking Aleatoric and Epistemic Uncertainty

The ideas of aleatoric and epistemic uncertainty are widely used to reason about the probabilistic predictions of machine-learning models. We identify incoherence in existing discussions of these ideas and suggest this stems from the aleatoric-epistemic view being insufficiently expressive to capture all the distinct quantities that researchers are interested in. To address this we present a decision-theoretic perspective that relates rigorous notions of uncertainty, predictive performance and statistical dispersion in data. This serves to support clearer thinking as the field moves forward. Additionally we provide insights into popular information-theoretic quantities, showing they can be poor estimators of what they are often purported to measure, while also explaining how they can still be useful in guiding data acquisition.

cs.LG↗

arXiv2024

Making Better Use of Unlabelled Data in Bayesian Active Learning

Fully supervised models are predominant in Bayesian active learning. We argue that their neglect of the information present in unlabelled data harms not just predictive performance but also decisions about what data to acquire. Our proposed solution is a simple framework for semi-supervised Bayesian active learning. We find it produces better-performing models than either conventional Bayesian active learning or semi-supervised learning with randomly acquired data. It is also easier to scale up than the conventional approach. As well as supporting a shift towards semi-supervised models, our findings highlight the importance of studying models and acquisition methods in conjunction.

cs.LG↗

arXiv2024

Generative Flows on Discrete State-Spaces: Enabling Multimodal Flows with Applications to Protein Co-Design

Combining discrete and continuous data is an important capability for generative models. We present Discrete Flow Models (DFMs), a new flow-based model of discrete data that provides the missing link in enabling flow-based generative models to be applied to multimodal continuous and discrete data problems. Our key insight is that the discrete equivalent of continuous space flow matching can be realized using Continuous Time Markov Chains. DFMs benefit from a simple derivation that includes discrete diffusion models as a specific instance while allowing improved performance over existing diffusion-based approaches. We utilize our DFMs method to build a multimodal flow-based modeling framework. We apply this capability to the task of protein co-design, wherein we learn a model for jointly generating protein structure and sequence. Our approach achieves state-of-the-art co-design performance while allowing the same multimodal model to be used for flexible generation of the sequence or structure.

stat.ML↗

arXiv2023

Rethinking Variational Inference for Probabilistic Programs with Stochastic Support

We introduce Support Decomposition Variational Inference (SDVI), a new variational inference (VI) approach for probabilistic programs with stochastic support. Existing approaches to this problem rely on designing a single global variational guide on a variable-by-variable basis, while maintaining the stochastic control flow of the original program. SDVI instead breaks the program down into sub-programs with static support, before automatically building separate sub-guides for each. This decomposition significantly aids in the construction of suitable variational families, enabling, in turn, substantial improvements in inference performance.

cs.LG↗