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Wenwen Li

Publications and source records attributed to Wenwen Li.

At least 73 records · Page 4Linked to original sources

ACAT: Adversarial Counterfactual Attention for Classification and Detection in Medical Imaging

In some medical imaging tasks and other settings where only small parts of the image are informative for the classification task, traditional CNNs can sometimes struggle to generalise. Manually annotated Regions of Interest (ROI) are sometimes used to isolate the most informative parts of the image. However, these are expensive to collect and may vary significantly across annotators. To overcome these issues, we propose a framework that employs saliency maps to obtain soft spatial attention masks that modulate the image features at different scales. We refer to our method as Adversarial Counterfactual Attention (ACAT). ACAT increases the baseline classification accuracy of lesions in brain CT scans from 71.39% to 72.55% and of COVID-19 related findings in lung CT scans from 67.71% to 70.84% and exceeds the performance of competing methods. We investigate the best way to generate the saliency maps employed in our architecture and propose a way to obtain them from adversarially generated counterfactual images. They are able to isolate the area of interest in brain and lung CT scans without using any manual annotations. In the task of localising the lesion location out of 6 possible regions, they obtain a score of 65.05% on brain CT scans, improving the score of 61.29% obtained with the best competing method.

eess.IV↗

Ultraviolet photon-counting single-pixel imaging

We demonstrate photon-counting single-pixel imaging in the ultraviolet region. Toward this target, we develop a high-performance compact single-photon detector based on a 4H-SiC single-photon avalanche diode (SPAD), where a tailored readout circuit with active hold-off time is designed to restrain detector noise and operate the SPAD in free-running mode. We use structured illumination to reconstruct 192$\times$192 compressed images at a 4 fps frame rate. To show the superior capability of ultraviolet characteristics, we use our single-pixel imaging system to identify and distinguish different transparent objects under low-intensity irradiation, and image ultraviolet light sources. The results provide a practical solution for general ultraviolet imaging applications.

physics.optics↗

Real-time GeoAI for High-resolution Mapping and Segmentation of Arctic Permafrost Features

This paper introduces a real-time GeoAI workflow for large-scale image analysis and the segmentation of Arctic permafrost features at a fine-granularity. Very high-resolution (0.5m) commercial imagery is used in this analysis. To achieve real-time prediction, our workflow employs a lightweight, deep learning-based instance segmentation model, SparseInst, which introduces and uses Instance Activation Maps to accurately locate the position of objects within the image scene. Experimental results show that the model can achieve better accuracy of prediction at a much faster inference speed than the popular Mask-RCNN model.

cs.CV↗

Semantic Similarity Measure of Natural Language Text through Machine Learning and a Keyword-Aware Cross-Encoder-Ranking Summarizer -- A Case Study Using UCGIS GIS&T Body of Knowledge

Initiated by the University Consortium of Geographic Information Science (UCGIS), GIS&T Body of Knowledge (BoK) is a community-driven endeavor to define, develop, and document geospatial topics related to geographic information science and technologies (GIS&T). In recent years, GIS&T BoK has undergone rigorous development in terms of its topic re-organization and content updating, resulting in a new digital version of the project. While the BoK topics provide useful materials for researchers and students to learn about GIS, the semantic relationships among the topics, such as semantic similarity, should also be identified so that a better and automated topic navigation can be achieved. Currently, the related topics are either defined manually by editors or authors, which may result in an incomplete assessment of topic relationship. To address this challenge, our research evaluates the effectiveness of multiple natural language processing (NLP) techniques in extracting semantics from text, including both deep neural networks and traditional machine learning approaches. Besides, a novel text summarization - KACERS (Keyword-Aware Cross-Encoder-Ranking Summarizer) - is proposed to generate a semantic summary of scientific publications. By identifying the semantic linkages among key topics, this work provides guidance for future development and content organization of the GIS&T BoK project. It also offers a new perspective on the use of machine learning techniques for analyzing scientific publications, and demonstrate the potential of KACERS summarizer in semantic understanding of long text documents.

cs.CL↗

GeoGraphViz: Geographically Constrained 3D Force-Directed Graph for Knowledge Graph Visualization

Knowledge graphs are a key technique for linking and integrating cross-domain data, concepts, tools, and knowledge to enable data-driven analytics. As much of the worlds data have become massive in size, visualizing graph entities and their interrelationships intuitively and interactively has become a crucial task for ingesting and better utilizing graph content to support semantic reasoning, discovering hidden knowledge discovering, and better scientific understanding of geophysical and social phenomena. Despite the fact that many such phenomena (e.g., disasters) have clear spatial footprints and geographical properties, their location information is considered only as a textual label in existing graph visualization tools, limiting their capability to reveal the geospatial distribution patterns of the graph nodes. In addition, most graph visualization techniques rely on 2D graph visualization, which constraints the dimensions of information that can be presented and lacks support for graph structure examination from multiple angles. To tackle the above challenges, we developed a novel 3D map-based graph visualization algorithm to enable interactive exploration of graph content and patterns in a spatially explicit manner. The algorithm extends a 3D force directed graph by integrating a web map, an additional geolocational force, and a force balancing variable that allows for the dynamic adjustment of the 3D graph structure and layout. This mechanism helps create a balanced graph view between the semantic forces among the graph nodes and the attractive force from a geolocation to a graph node. Our solution offers a new perspective in visualizing and understanding spatial entities and events in a knowledge graph.

cs.HC↗

Applying Machine Learning to Understand Water Security and Water Access Inequality in Underserved Colonia Communities

This paper explores the application of machine learning to enhance our understanding of water accessibility issues in underserved communities called Colonias located along the northern part of the United States - Mexico border. We analyzed more than 2000 such communities using data from the Rural Community Assistance Partnership (RCAP) and applied hierarchical clustering and the adaptive affinity propagation algorithm to automatically group Colonias into clusters with different water access conditions. The Gower distance was introduced to make the algorithm capable of processing complex datasets containing both categorical and numerical attributes. To better understand and explain the clustering results derived from the machine learning process, we further applied a decision tree analysis algorithm to associate the input data with the derived clusters, to identify and rank the importance of factors that characterize different water access conditions in each cluster. Our results complement experts' priority rankings of water infrastructure needs, providing a more in-depth view of the water insecurity challenges that the Colonias suffer from. As an automated and reproducible workflow combining a series of tools, the proposed machine learning pipeline represents an operationalized solution for conducting data-driven analysis to understand water access inequality. This pipeline can be adapted to analyze different datasets and decision scenarios.

stat.AP↗

Explainable GeoAI: Can saliency maps help interpret artificial intelligence's learning process? An empirical study on natural feature detection

Improving the interpretability of geospatial artificial intelligence (GeoAI) models has become critically important to open the "black box" of complex AI models, such as deep learning. This paper compares popular saliency map generation techniques and their strengths and weaknesses in interpreting GeoAI and deep learning models' reasoning behaviors, particularly when applied to geospatial analysis and image processing tasks. We surveyed two broad classes of model explanation methods: perturbation-based and gradient-based methods. The former identifies important image areas, which help machines make predictions by modifying a localized area of the input image. The latter evaluates the contribution of every single pixel of the input image to the model's prediction results through gradient backpropagation. In this study, three algorithms-the occlusion method, the integrated gradients method, and the class activation map method-are examined for a natural feature detection task using deep learning. The algorithms' strengths and weaknesses are discussed, and the consistency between model-learned and human-understandable concepts for object recognition is also compared. The experiments used two GeoAI-ready datasets to demonstrate the generalizability of the research findings.

cs.CV↗

GeoAI for Knowledge Graph Construction: Identifying Causality Between Cascading Events to Support Environmental Resilience Research

Knowledge graph technology is considered a powerful and semantically enabled solution to link entities, allowing users to derive new knowledge by reasoning data according to various types of reasoning rules. However, in building such a knowledge graph, events modeling, such as that of disasters, is often limited to single, isolated events. The linkages among cascading events are often missing in existing knowledge graphs. This paper introduces our GeoAI (Geospatial Artificial Intelligence) solutions to identify causality among events, in particular, disaster events, based on a set of spatially and temporally-enabled semantic rules. Through a use case of causal disaster events modeling, we demonstrated how these defined rules, including theme-based identification of correlated events, spatiotemporal co-occurrence constraint, and text mining of event metadata, enable the automatic extraction of causal relationships between different events. Our solution enriches the event knowledge base and allows for the exploration of linked cascading events in large knowledge graphs, therefore empowering knowledge query and discovery.

cs.AI↗

4G 5G Cell-level Multi-indicator Forecasting based on Dense-MLP

With the development of 4G/5G, the rapid growth of traffic has caused a large number of cell indicators to exceed the warning threshold, and network quality has deteriorated. It is necessary for operators to solve the congestion in advance and effectively to guarantee the quality of user experience. Cell-level multi-indicator forecasting is the foundation task for proactive complex network optimization. In this paper, we propose the 4G/5G Cell-level multi-indicator forecasting method based on the dense-Multi-Layer Perceptron (MLP) neural network, which adds additional fully-connected layers between non-adjacent layers in an MLP network. The model forecasted the following week's traffic indicators of 13000 cells according to the six-month historical indicators of 65000 cells in the 4G&5G network, which got the highest weighted MAPE score (0.2484) in the China Mobile problem statement in the ITU-T AI/ML in 5G Challenge 2021. Furthermore, the proposed model has been integrated into the AsiaInfo 4G/5G energy-saving system and deployed in Jiangsu Province of China.

cs.NI↗

Geo-Situation for Modeling Causality of Geo-Events in Knowledge Graphs

This paper proposes a framework for representing and reasoning causality between geographic events by introducing the notion of Geo-Situation. This concept links to observational snapshots that represent sets of conditions, and either acts as the setting of a geo-event or influences the initiation of a geo-event. We envision the use of this framework within knowledge graphs that represent geographic entities will help answer the important question of why a geographic event occurred.

cs.AI↗

Towards Universal Neural Network Potential for Material Discovery Applicable to Arbitrary Combination of 45 Elements

Computational material discovery is under intense study owing to its ability to explore the vast space of chemical systems. Neural network potentials (NNPs) have been shown to be particularly effective in conducting atomistic simulations for such purposes. However, existing NNPs are generally designed for narrow target materials, making them unsuitable for broader applications in material discovery. To overcome this issue, we have developed a universal NNP called PreFerred Potential (PFP), which is able to handle any combination of 45 elements. Particular emphasis is placed on the datasets, which include a diverse set of virtual structures used to attain the universality. We demonstrated the applicability of PFP in selected domains: lithium diffusion in LiFeSO${}_4$F, molecular adsorption in metal-organic frameworks, an order-disorder transition of Cu-Au alloys, and material discovery for a Fischer-Tropsch catalyst. They showcase the power of PFP, and this technology provides a highly useful tool for material discovery.

cond-mat.mtrl-sci↗

Ensemble Learning For Mega Man Level Generation

Procedural content generation via machine learning (PCGML) is the process of procedurally generating game content using models trained on existing game content. PCGML methods can struggle to capture the true variance present in underlying data with a single model. In this paper, we investigated the use of ensembles of Markov chains for procedurally generating \emph{Mega Man} levels. We conduct an initial investigation of our approach and evaluate it on measures of playability and stylistic similarity in comparison to a non-ensemble, existing Markov chain approach.

cs.LG↗

Learning from Counting: Leveraging Temporal Classification for Weakly Supervised Object Localization and Detection

This paper reports a new solution of leveraging temporal classification to support weakly supervised object detection (WSOD). Specifically, we introduce raster scan-order techniques to serialize 2D images into 1D sequence data, and then leverage a combined LSTM (Long, Short-Term Memory) and CTC (Connectionist Temporal Classification) network to achieve object localization based on a total count (of interested objects). We term our proposed network LSTM-CCTC (Count-based CTC). This "learning from counting" strategy differs from existing WSOD methods in that our approach automatically identifies critical points on or near a target object. This strategy significantly reduces the need of generating a large number of candidate proposals for object localization. Experiments show that our method yields state-of-the-art performance based on an evaluation on PASCAL VOC datasets.

cs.CV↗

Phase stability of Au-Li binary systems studied using neural network potential

The miscibility of Au and Li exhibits a potential application as an adhesion layer and electrode material in secondary batteries. Here, to explore alloying properties, we constructed a neural network potential (NNP) of Au-Li binary systems based on density functional theory (DFT) calculations. To accelerate construction of NNPs, we proposed an efficient and inexpensive method of structural dataset generation. The predictions by the constructed NNP on lattice parameters and phonon properties agree well with those obtained by DFT calculations. We also investigated the mixing energy of Au$_{1-x}$Li$_{x}$ with fine composition grids, showing excellent agreement with DFT verifications. We found the existence of various compositions with structures on and slightly above the convex hull, which can explain the lack of consensus on the Au-Li stable phases in previous studies. Moreover, we newly found Au$_{0.469}$Li$_{0.531}$ as a stable phase, which has never been reported elsewhere. Finally, we examined the alloying process starting from the phase separated structure to the complete mixing phase. We found that when multiple adjacent Au atoms dissolved into Li, the alloying of the entire Au/Li interface started from the dissolved region. This paper demonstrates the applicability of NNPs toward miscible phases and provides the understanding of the alloying mechanism.

cond-mat.mtrl-sci↗

Influences of weak disorder on dynamical quantum phase transitions of anisotropic XY chain

In this paper, the effects of disorder on the dynamical quantum phase transitions (DQPTs) in the transverse-field anisotropic XY chain are studied by numerically calculating the Loschmidt echo after quench. We obtain the formula for calculating the Loschmidt echo of the inhomogeneous system in real space. By comparing the results with that of the homogeneous chain, we find that when the quench crosses the Ising transition, the small disorder will cause a new critical point. As the disorder increases, more critical points of the DQPTs will occur, constituting a critical region. In the quench across the anisotropic transition, the disorder will cause a critical region near the critical point, and the width of the critical region increases by the disordered strength. In the case of quench passing through two critical lines, the small disorder leads to the system to have three additional critical points. When the quench is in the ferromagnetic phase, the large disorder causes the two critical points of the homogeneous case to become a critical region. And for the quench in the paramagnetic phase, the DQPTs will disappear for large disorder.

cond-mat.dis-nn↗

Artificial Intelligence Approaches

Artificial Intelligence (AI) has received tremendous attention from academia, industry, and the general public in recent years. The integration of geography and AI, or GeoAI, provides novel approaches for addressing a variety of problems in the natural environment and our human society. This entry briefly reviews the recent development of AI with a focus on machine learning and deep learning approaches. We discuss the integration of AI with geography and particularly geographic information science, and present a number of GeoAI applications and possible future directions.

cs.AI↗

Single frame wide-field Nanoscopy based on Ghost Imaging via Sparsity Constraints (GISC Nanoscopy)

The applications of present nanoscopy techniques for live cell imaging are limited by the long sampling time and low emitter density. Here we developed a new single frame wide-field nanoscopy based on ghost imaging via sparsity constraints (GISC Nanoscopy), in which a spatial random phase modulator is applied in a wide-field microscopy to achieve random measurement for fluorescence signals. This new method can effectively utilize the sparsity of fluorescence emitters to dramatically enhance the imaging resolution to 80 nm by compressive sensing (CS) reconstruction for one raw image. The ultra-high emitter density of 143 μm-2 has been achieved while the precision of single-molecule localization below 25 nm has been maintained. Thereby working with high-density of photo-switchable fluorophores GISC nanoscopy can reduce orders of magnitude sampling frames compared with previous single-molecule localization based super-resolution imaging methods.

physics.optics↗

Domain Independent SVM for Transfer Learning in Brain Decoding

Brain imaging data are important in brain sciences yet expensive to obtain, with big volume (i.e., large p) but small sample size (i.e., small n). To tackle this problem, transfer learning is a promising direction that leverages source data to improve performance on related, target data. Most transfer learning methods focus on minimizing data distribution mismatch. However, a big challenge in brain imaging is the large domain discrepancies in cognitive experiment designs and subject-specific structures and functions. A recent transfer learning approach minimizes domain dependence to learn common features across domains, via the Hilbert-Schmidt Independence Criterion (HSIC). Inspired by this method, we propose a new Domain Independent Support Vector Machine (DI-SVM) for transfer learning in brain condition decoding. Specifically, DI-SVM simultaneously minimizes the SVM empirical risk and the dependence on domain information via a simplified HSIC. We use public data to construct 13 transfer learning tasks in brain decoding, including three interesting multi-source transfer tasks. Experiments show that DI-SVM's superior performance over eight competing methods on these tasks, particularly an improvement of more than 24% on multi-source transfer tasks.

cs.LG↗