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Xiaofan Zhang

Publications and source records attributed to Xiaofan Zhang.

At least 19 recordsLinked to original sources

VERPO: Verified Evidence Regularized Policy Optimization

Verifiable outcome rewards guide language-model post-training, but sequence-level advantages do not identify which token-level decisions should be preserved or revised. Evidence-conditioned Teachers provide denser supervision by replaying sampled trajectories with privileged feedback. Yet indiscriminate imitation risks transferring formatting or reasoning-style shifts that do not support task success. We introduce VERPO, a Verified Evidence Regularized Policy Optimization framework that treats evidence as a proposal for policy correction while retaining the outcome objective. It separates evidence-free reference restoration from signed token-level evidence corrections. Fisher Evidence Contrast attenuates corrections along an estimated evidence-presence direction. A stopped token-wise ZPD controller scales acceptance according to local reward alignment and Fisher movement cost, while the reference channel remains independent of acceptance. Across five scientific-reasoning and tool-use tasks, the best variant on each backbone exceeds the strongest compared baseline in average score. The averages rise from 0.6826 to 0.6857 on Qwen3-4B, from 0.6895 to 0.7058 on Qwen3-8B, and from 0.4751 to 0.5657 on Llama-3.2-1B.

cs.LG

EviDx: Evidence-Aware Active Diagnosis with Scaffolded LLM Agents

Clinical diagnosis is an active evidence-seeking process in which clinicians acquire evidence, update competing hypotheses, and decide when the available evidence is sufficient for diagnosis. Yet many medical diagnosis systems built around large language models (LLMs) still formulate diagnosis as static case-to-answer prediction, with limited support for evidence acquisition. Agentic LLMs offer a dynamic alternative through tool use and intermediate diagnostic trajectories, but existing systems often under-specify how patient evidence should be exposed, scaffolded, and controlled at runtime. We introduce EviDx, an evidence-aware active diagnosis framework that pairs patient-specific diagnostic environments with a clinical diagnostic scaffold and an observer-guided runtime harness. In EviDx, $\mathcal{E}$-Synthesis constructs interactive environments from raw clinical cases; the scaffold organizes role-specialized agents, evidence tools, and evolving evidence states; and the harness regulates diagnostic termination by tracking uncertainty and evidence coverage. A 3-level evaluation pyramid assesses execution robustness, reasoning dynamics, and diagnostic outcomes. Experiments show that EviDx improves diagnostic performance and process stability while revealing model-dependent capability boundaries.

cs.AI

DiagnosisArena: Benchmarking Diagnostic Reasoning for Large Language Models

The emergence of groundbreaking large language models capable of performing complex reasoning tasks holds significant promise for addressing various scientific challenges, including those arising in complex clinical scenarios. To enable their safe and effective deployment in real-world healthcare settings, it is urgently necessary to benchmark the diagnostic capabilities of current models systematically. Given the limitations of existing medical benchmarks in evaluating advanced diagnostic reasoning, we present DiagnosisArena, a comprehensive and challenging benchmark designed to rigorously assess professional-level diagnostic competence. DiagnosisArena consists of 1,113 pairs of segmented patient cases and corresponding diagnoses, spanning 28 medical specialties, deriving from clinical case reports published in 10 top-tier medical journals. The benchmark is developed through a meticulous construction pipeline, involving multiple rounds of screening and review by both AI systems and human experts, with thorough checks conducted to prevent data leakage. Our study reveals that even the most advanced reasoning models, o3, o1, and DeepSeek-R1, achieve only 51.12%, 31.09%, and 17.79% accuracy, respectively. This finding highlights a significant generalization bottleneck in current large language models when faced with clinical diagnostic reasoning challenges. Through DiagnosisArena, we aim to drive further advancements in AI's diagnostic reasoning capabilities, enabling more effective solutions for real-world clinical diagnostic challenges. We provide the benchmark and evaluation tools for further research and development https://github.com/SPIRAL-MED/DiagnosisArena.

cs.CL

MedMCP-Calc: Benchmarking LLMs for Realistic Medical Calculator Scenarios via MCP Integration

Medical calculators are fundamental to quantitative, evidence-based clinical practice. However, their real-world use is an adaptive, multi-stage process, requiring proactive EHR data acquisition, scenario-dependent calculator selection, and multi-step computation, whereas current benchmarks focus only on static single-step calculations with explicit instructions. To address these limitations, we introduce MedMCP-Calc, the first benchmark for evaluating LLMs in realistic medical calculator scenarios through Model Context Protocol (MCP) integration. MedMCP-Calc comprises 118 scenario tasks across 4 clinical domains, featuring fuzzy task descriptions mimicking natural queries, structured EHR database interaction, external reference retrieval, and process-level evaluation. Our evaluation of 23 leading models reveals critical limitations: even top performers like Claude Opus 4.5 exhibit substantial gaps, including difficulty selecting appropriate calculators for end-to-end workflows given fuzzy queries, poor performance in iterative SQL-based database interactions, and marked reluctance to leverage external tools for numerical computation. Performance also varies considerably across clinical domains. Building on these findings, we develop CalcMate, a fine-tuned model incorporating scenario planning and tool augmentation, achieving state-of-the-art performance among open-source models. Benchmark and Codes are available in https://github.com/SPIRAL-MED/MedMCP-Calc.

cs.AI

LiveMem: Maintaining Memory State Continuity in Long-Running LLM Inference

Long-running assistants and agents consume interaction streams that eventually outgrow the context. Existing context retention, summarization, and retrieval preserve access to selected history, but do not provide a persistent state over the full lifecycle when working context changes. We formulate this missing inference capability as \emph{state continuity under context turnover}: carrying computation forward through a fixed-capacity memory state whose lifetime is independent of the active context. We introduce an intrinsic memory method, \textbf{LiveMem}, which augments a pretrained full-attention LLM with a memory state that preserves the historical information over the whole lifecycle while the main attention path retains a bounded KV window. Context turnover and memory state maintaining, memory-oriented post-training, and state-aware serving jointly make this memory state load bearing after its originating tokens are released. Our experiments show that LiveMem achieves leading overall performance among evaluated systems and other intrinsic memory methods. Experiments on LongMemEval show that LiveMem is able to answer the question based on the memory state, even when the supporting evidence has been removed from the current context, and evidence-distance analysis shows that useful information persists beyond the active window. LiveMem thus establishes state continuity as a distinct and complementary abstraction for continual LLM inference.

cs.CL

MICA: Multi-granularity Intertemporal Credit Assignment for Long-Horizon Emotional Support Dialogue

Reinforcement learning (RL) for large language models (LLMs) has shown strong performance in single-turn tasks, but extending it to multi-turn interaction remains challenging due to sparse rewards and poor per-turn credit assignment. In emotional support dialogues, responses shape future user states, so matched-state step-wise comparison is unavailable, while trajectory-level supervision is insufficient. We propose MICA (Multi-granularity Intertemporal Credit Assignment), a critic-free RL framework for multi-turn emotional support tasks. MICA derives both immediate and delayed credit from a shared potential function over the user's structured support state. Incremental Distance Reward measures the per-turn decrease in residual distance to the target state, while its Monte Carlo return captures delayed effects. After scope-specific normalization, the two signals form a mixed advantage for stable per-turn optimization without matched-state comparisons, rollout trees, or a learned critic. On EMPA, EQ-Bench, and EmoBench with Qwen2.5-7B-Instruct and Qwen3-8B/14B/32B, MICA consistently outperforms GRPO and REINFORCE++, achieving up to +42.5 on EMPA, while adding no rollout cost and remaining robust to reward judges. These results show that turn-aware credit assignment enables effective and practical multi-turn RL for interactive LLMs.

cs.CL

Reinforcement Learning for Evidence-Seeking Diagnostic Reasoning with Large Language Models

Recent reasoning-centric Large Language Models (LLMs) have made significant strides, yet they predominantly operate on a passive-inference pattern that assumes complete information. In contrast, real-world clinical intelligence is inherently an iterative investigative process requiring strategic evidence acquisition. To bridge this gap, we formalize medical diagnosis as an Iterative Evidence-Seeking Task. We leverage Reinforcement Learning with Verifiable Rewards (RLVR) to elicit intrinsic reasoning within a closed-loop environment, guided by a novel suite of rewards that enforce diagnostic precision and examination consistency. To facilitate this, we introduce the Retrieval-Augmented Generation-based Examination Simulator (RAGES), a high-fidelity clinical oracle that provides realistic, knowledge-grounded follow-up evidence. Empirical results across diverse datasets demonstrate that our framework enables LLMs to transition from passive responders to autonomous assistants. Notably, our model demonstrates comparable performance to larger and reasoning-enhanced baselines, while RAGES proves superior to vanilla LLMs in generating biologically plausible clinical feedback.

cs.AI

DeVAR: Low-Dose CT Denoising via Visual Autoregressive Modeling

Computed tomography (CT) plays a crucial role in medical diagnosis, but minimizing radiation exposure while maintaining image quality remains a critical challenge. Low-dose CT (LDCT) protocols reduce radiation risks but inevitably suffer from severe noise and artifacts that compromise diagnostic accuracy. While existing deep learning methods have achieved promising results, there remains a continuous quest for generative paradigms that intrinsically capture global-to-local structural dependencies to better preserve fine anatomical details. To this end, we propose DeVAR, a novel generative framework that applies visual autoregressive modeling (VAR) to LDCT denoising for the first time. Conditioned on global context provided by LDCT prefix tokens, DeVAR progressively generates discrete token maps of the target normal-dose CT (NDCT) via next-scale prediction. Because quantization inherently discards high-frequency information, we introduce a residual refiner to capture subtle anatomical structures beyond the capacity of a discrete codebook. Finally, empowered by a dual-representation hybrid training strategy, our hybrid NDCT decoder seamlessly integrates continuous and discrete latents to reconstruct high-fidelity, detail-preserved images. Extensive experiments on two public datasets demonstrate that DeVAR consistently achieves superior qualitative and quantitative performance compared to state-of-the-art LDCT denoising methods.

eess.IV

Inverse scattering for the focusing nonlinear Schrödinger equation with elliptic background and full soliton gas

In this manuscript we develop the direct and inverse scattering problem for the cubic focusing nonlinear Schrödinger equation and for initial data that are asymptotic to an elliptic travelling wave with distinct phase at $\pm \infty$. We consider the case in which the spectral bands intersect the real axis. We then show that this class of initial data has non zero intersection with the full soliton gas initial data.

math.AP

MedExpMem: Adapting Experience Memory for Differential Diagnosis

Experienced physicians develop diagnostic expertise through clinical practice, acquiring not only disease knowledge but also the ability to differentiate confusable conditions. Current medical vision-language models (VLMs) lack this capability -- their parameters encode static knowledge that does not evolve across diagnostic encounters. We propose MedExpMem, an experience memory framework enabling VLM-based diagnostic agents to accumulate differential diagnosis expertise. Unlike retrieval-augmented generation, which retrieves encyclopedic disease descriptions, MedExpMem memorizes discriminative experience derived from the agent's own diagnostic failures and organizes them as pairwise differential notes encoding key discriminators, actionable decision rules and reasoning error patterns. The framework adopts a two-phase construction process mirroring physician learning: initial practice exposes knowledge gaps, and reflective re-diagnosis refines understanding. When encountering new cases, the agent retrieves experience memory to guide differential reasoning. We evaluate MedExpMem on a radiology benchmark spanning 11 subspecialties. Results demonstrate consistent accuracy improvements, maximum 7.0%, across diverse models and scales. Analytical experiments validate experience quality and robustness, demonstrating MedExpMem as a competitive method addresses medical adaptation needs beyond the reach of parameteric learning.

cs.LG

Human-AI Co-reasoning for Clinical Diagnosis with Evidence-Integrated Language Agent

We present PULSE, a medical reasoning agent that combines a domain-tuned large language model with scientific literature retrieval to support diagnostic decision-making in complex real-world cases. To evaluate its capabilities, we curated a benchmark of 82 authentic endocrinology case reports encompassing a broad spectrum of disease types and incidence levels. In controlled experiments, we compared PULSE's performance against physicians with varying levels of expertise-from residents to senior specialists-and examined how AI assistance influenced human diagnostic reasoning. PULSE attained expert-competitive accuracy, outperforming residents and junior specialists while matching senior specialist performance at both Top@1 and Top@4 thresholds. Unlike physicians, whose accuracy declined with disease rarity, PULSE maintained stable performance across incidence tiers. The agent also exhibited adaptive reasoning, increasing output length with case difficulty in a manner analogous to the longer deliberation observed among expert clinicians. When used collaboratively, PULSE enabled physicians to correct initial errors and broaden diagnostic hypotheses, but also introduced risks of automation bias. The study explores both serial and concurrent collaboration workflows, revealing that PULSE offers robust support across common and rare presentations. These findings underscore both the promise and the limitations of language model-based agents in clinical diagnosis, and offer a framework for evaluating their role in real-world decision-making.

cs.CL

EMPA: Evaluating Persona-Aligned Empathy as a Process

Evaluating persona-aligned empathy in LLM-based dialogue agents remains challenging. User states are latent, feedback is sparse and difficult to verify in situ, and seemingly supportive turns can still accumulate into trajectories that drift from persona-specific needs. We introduce EMPA, a process-oriented framework that evaluates persona-aligned support as sustained intervention rather than isolated replies. EMPA distills real interactions into controllable, psychologically grounded scenarios, couples them with an open-ended multi-agent sandbox that exposes strategic adaptation and failure modes, and scores trajectories in a latent psychological space by directional alignment, cumulative impact, and stability. The resulting signals and metrics support reproducible comparison and optimization of long-horizon empathic behavior, and they extend to other agent settings shaped by latent dynamics and weak, hard-to-verify feedback.

cs.AI

Direct Scattering of the Focusing Nonlinear Schrödinger Equation with Step-like Oscillatory Initial Data

In this manuscript we set up the direct and inverse scattering problems for step-like traveling-wave solutions of the nonlinear Schrödinger equation. Specifically, we consider initial data $u(x,0)$ satisfying $u(x,0)\to u_0^\ell(x)$ as $x\to-\infty$ and $u(x,0)\to u_0^r(x)$ as $x\to+\infty$, where $u_0^\ell(x)$ and $u_0^r(x)$ are elliptic traveling waves. Under suitable assumptions on the initial data we formulate the direct scattering problem and establish analytic properties of the scattering data. We then formulate the inverse problem as a Riemann--Hilbert problem and prove its solvability. Finally, we observe that this Riemann--Hilbert formulation is a special case of the one arising for full soliton-gas initial data.

math.AP

CURE: A Multimodal Benchmark for Clinical Understanding and Retrieval Evaluation

Multimodal large language models (MLLMs) demonstrate considerable potential in clinical diagnostics, a domain that inherently requires synthesizing complex visual and textual data alongside consulting authoritative medical literature. However, existing benchmarks primarily evaluate MLLMs in end-to-end answering scenarios. This limits the ability to disentangle a model's foundational multimodal reasoning from its proficiency in evidence retrieval and application. We introduce the Clinical Understanding and Retrieval Evaluation (CURE) benchmark. Comprising $500$ multimodal clinical cases mapped to physician-cited reference literature, CURE evaluates reasoning and retrieval under controlled evidence settings to disentangle their respective contributions. We evaluate state-of-the-art MLLMs across distinct evidence-gathering paradigms in both closed-ended and open-ended diagnosis tasks. Evaluations reveal a stark dichotomy: while advanced models demonstrate clinical reasoning proficiency when supplied with physician reference evidence (achieving up to $73.4\%$ accuracy on differential diagnosis), their performance substantially declines (as low as $25.4\%$) when reliant on independent retrieval mechanisms. This disparity highlights the dual challenges of effectively integrating multimodal clinical evidence and retrieving precise supporting literature. CURE is publicly available at https://github.com/yanniangu/CURE.

cs.CL

Radiologist Copilot: An Agentic Framework Orchestrating Specialized Tools for Reliable Radiology Reporting

In clinical practice, radiology reporting is an essential yet complex, time-intensive, and error-prone task, particularly for 3D medical images. Existing automated approaches based on medical vision-language models primarily focus on isolated report generation. However, real-world radiology reporting extends far beyond report writing, which requires meticulous image observation and interpretation, appropriate template selection, and rigorous quality control to ensure adherence to clinical standards. This multi-stage, planning-intensive workflow fundamentally exceeds the capabilities of single-pass models. To bridge this gap, we propose Radiologist Copilot, an agentic system that autonomously orchestrates specialized tools to complete the entire radiology reporting workflow rather than isolated report writing. Radiologist Copilot enables region image localization and region analysis planning to support detailed visual reasoning, adopts strategic template selection for standardized report writing, and incorporates dedicated report quality control via quality assessment and feedback-driven iterative refinement. By integrating localization, interpretation, template selection, report composition, and quality control, Radiologist Copilot delivers a comprehensive and clinically aligned radiology reporting workflow. Experimental results demonstrate that it significantly outperforms state-of-the-art methods, supporting radiologists throughout the entire radiology reporting process. The code will be released upon acceptance.

cs.AI

CT-Flow: Orchestrating CT Interpretation Workflow with Model Context Protocol Servers

Recent advances in Large Vision-Language Models (LVLMs) have shown strong potential for multi-modal radiological reasoning, particularly in tasks like diagnostic visual question answering (VQA) and radiology report generation. However, most existing approaches for 3D CT analysis largely rely on static, single-pass inference. In practice, clinical interpretation is a dynamic, tool-mediated workflow where radiologists iteratively review slices and use measurement, radiomics, and segmentation tools to refine findings. To bridge this gap, we propose CT-Flow, an agentic framework designed for interoperable volumetric interpretation. By leveraging the Model Context Protocol (MCP), CT-Flow shifts from closed-box inference to an open, tool-aware paradigm. We curate CT-FlowBench, the first large-scale instruction-tuning benchmark tailored for 3D CT tool-use and multi-step reasoning. Built upon this, CT-Flow functions as a clinical orchestrator capable of decomposing complex natural language queries into automated tool-use sequences. Experimental evaluations on CT-FlowBench and standard 3D VQA datasets demonstrate that CT-Flow achieves state-of-the-art performance, surpassing baseline models by 41% in diagnostic accuracy and achieving a 95% success rate in autonomous tool invocation. This work provides a scalable foundation for integrating autonomous, agentic intelligence into real-world clinical radiology.

cs.CV

A Synthetic Data-Driven Radiology Foundation Model for Pan-tumor Clinical Diagnosis

AI-assisted imaging made substantial advances in tumor diagnosis and management. However, a major barrier to developing robust oncology foundation models is the scarcity of large-scale, high-quality annotated datasets, which are limited by privacy restrictions and the high cost of manual labeling. To address this gap, we present PASTA, a pan-tumor radiology foundation model built on PASTA-Gen, a synthetic data framework that generated 30,000 3D CT scans with pixel-level lesion masks and structured reports of tumors across ten organ systems. Leveraging this resource, PASTA achieves state-of-the-art performance on 45 of 46 oncology tasks, including non-contrast CT tumor screening, lesion segmentation, structured reporting, tumor staging, survival prediction, and MRI-modality transfer. To assess clinical applicability, we developed PASTA-AID, a clinical decision support system, and ran a retrospective simulated clinical trial across two scenarios. For pan-tumor screening on plain CT with fixed reading time, PASTA-AID increased radiologists' throughput by 11.1-25.1% and improved sensitivity by 17.0-31.4% and precision by 10.5-24.9%; additionally, in a diagnosis-aid workflow, it reduced segmentation time by up to 78.2% and reporting time by up to 36.5%. Beyond gains in accuracy and efficiency, PASTA-AID narrowed the expertise gap, enabling less-experienced radiologists to approach expert-level performance. Together, this work establishes an end-to-end, synthetic data-driven pipeline spanning data generation, model development, and clinical validation, thereby demonstrating substantial potential for pan-tumor research and clinical translation.

eess.IV

Unifying Multiple Foundation Models for Advanced Computational Pathology

Foundation models have substantially advanced computational pathology by learning transferable visual representations from large histological datasets, yet their performance varies widely across tasks due to differences in training data composition and reliance on proprietary datasets that cannot be cumulatively expanded. Existing efforts to combine foundation models through offline distillation partially mitigate this issue but require dedicated distillation data and repeated retraining to integrate new models. Here we present Shazam, an online integration model that adaptively combines multiple pretrained pathology foundation models within a unified and scalable representation learning paradigm. Our findings show that fusing multi-level features through adaptive expert weighting and online distillation enables efficient consolidation of complementary model strengths without additional pretraining. Across spatial transcriptomics prediction, survival prognosis, tile-level classification, and visual question answering, Shazam consistently outperforms strong individual models, demonstrating that online model integration provides a practical and extensible strategy for advancing computational pathology.

cs.CV