arXiv subjects

Xun Jia

Publications and source records attributed to Xun Jia.

81 records · Page 5Linked to original sources

arXiv2010

GPU-based Fast Cone Beam CT Reconstruction from Undersampled and Noisy Projection Data via Total Variation

Purpose: Cone-beam CT (CBCT) plays an important role in image guided radiation therapy (IGRT). However, the large radiation dose from serial CBCT scans in most IGRT procedures raises a clinical concern, especially for pediatric patients who are essentially excluded from receiving IGRT for this reason. The goal of this work is to develop a fast GPU-based algorithm to reconstruct CBCT from undersampled and noisy projection data so as to lower the imaging dose. Methods: The CBCT is reconstructed by minimizing an energy functional consisting of a data fidelity term and a total variation regularization term. We developed a GPU-friendly version of the forward-backward splitting algorithm to solve this model. A multi-grid technique is also employed. Results: It is found that 20~40 x-ray projections are sufficient to reconstruct images with satisfactory quality for IGRT. The reconstruction time ranges from 77 to 130 sec on a NVIDIA Tesla C1060 GPU card, depending on the number of projections used, which is estimated about 100 times faster than similar iterative reconstruction approaches. Moreover, phantom studies indicate that our algorithm enables the CBCT to be reconstructed under a scanning protocol with as low as 0.1 mAs/projection. Comparing with currently widely used full-fan head and neck scanning protocol of ~360 projections with 0.4 mAs/projection, it is estimated that an overall 36~72 times dose reduction has been achieved in our fast CBCT reconstruction algorithm. Conclusions: This work indicates that the developed GPU-based CBCT reconstruction algorithm is capable of lowering imaging dose considerably. The high computation efficiency in this algorithm makes the iterative CBCT reconstruction approach applicable in real clinical environments.

physics.med-ph↗

arXiv2010

PCA-based lung motion model

Organ motion induced by respiration may cause clinically significant targeting errors and greatly degrade the effectiveness of conformal radiotherapy. It is therefore crucial to be able to model respiratory motion accurately. A recently proposed lung motion model based on principal component analysis (PCA) has been shown to be promising on a few patients. However, there is still a need to understand the underlying reason why it works. In this paper, we present a much deeper and detailed analysis of the PCA-based lung motion model. We provide the theoretical justification of the effectiveness of PCA in modeling lung motion. We also prove that under certain conditions, the PCA motion model is equivalent to 5D motion model, which is based on physiology and anatomy of the lung. The modeling power of PCA model was tested on clinical data and the average 3D error was found to be below 1 mm.

physics.med-ph↗

arXiv2008

Quantum oscillations in graphene in the presence of disorder and interactions

Quantum oscillations in graphene is discussed. The effect of interactions are addressed by Kohn's theorem regarding de Haas-van Alphen oscillations, which states that electron-electron interactions cannot affect the oscillation frequencies as long as disorder is neglected and the system is sufficiently screened, which should be valid for chemical potentials not very close to the Dirac point. We determine the positions of Landau levels in the presence of potential disorder from exact transfer matrix and finite size diagonalization calculations. The positions are shown to be unshifted even for moderate disorder; stronger disorder, can, however, lead to shifts, but this also appears minimal even for disorder width as large as one-half of the bare hopping matrix element on the graphene lattice. Shubnikov-de Haas oscillations of the conductivity are calculated analytically within a self-consistent Born approximation of impurity scattering. The oscillatory part of the conductivity follows the widely invoked Lifshitz-Kosevich form when certain mass and frequency parameters are properly interpreted.

cond-mat.mes-hall↗

arXiv2008

Competing order, Fermi surface reconstruction, and quantum oscillations in underdoped high temperature superconductors

We consider incommensurate $d$-density wave order in underdoped high temperature superconductors. We find that Fermi surface reconstruction can correctly capture the phenomenology of the recent quantum oscillation experiments that suggest incommensurate order. The predicted frequencies are a frequency around 530 T arising from the electron pocket, a hole frequency at around 1650 T, and a new low frequency from a smaller hole pocket at 250 T for which there are some indications that require further investigation. The oscillation corresponding to the electron pocket will be further split due to bilayer coupling but the splitting is sufficiently small to require more refined measurements. The truly incommensurate $d$-density wave breaks both time reversal and inversion but the product of these two symmetry operations is preserved. There is some similarity of our results with the spiral spin density wave order, which, as pointed out by Overhauser, also breaks time reversal and inversion. Calculations corresponding to higher order commensuration produces results similar to anti-phase spin stripes, but appear to us to be an unlikely explanation of the experiments. The analysis of the Gorkov equation in the mixed state shows that the oscillation frequencies are unshifted from the putative normal state and the additional Dingle factor arising from the presence of the mixed state can provide a subtle distinction between the spiral spin density wave and the $d$-density wave.

cond-mat.supr-con↗

arXiv2008

Hidden order revealed in quantum oscillations in cuprate superconductors

We follow the line of reasoning that hidden broken symmetries are the root of quantum oscillations observed in underdoped superconductors and examine the role of bilayer splitting and incommensuration. This is a view that eschews the notion of a featureless Mott liquid as the source of complexity. Instead, our view is grounded in a conventional Fermi surface and quasiparticles. We show that bilayer splitting and/or incommensurate $d$-density wave order can lead to many interesting results, in particular a splitting of the main frequency of the quantum oscillations.

cond-mat.supr-con↗

arXiv2008

Dissipation and criticality in the lowest Landau level of graphene

The lowest Landau level of graphene is studied numerically by considering a tight-binding Hamiltonian with disorder. The Hall conductance $σ_\mathrm{xy}$ and the longitudinal conductance $σ_\mathrm{xx}$ are computed. We demonstrate that bond disorder can produce a plateau-like feature centered at $ν=0$, while the longitudinal conductance is nonzero in the same region, reflecting a band of extended states between $\pm E_{c}$, whose magnitude depends on the disorder strength. The critical exponent corresponding to the localization length at the edges of this band is found to be $2.47\pm 0.04$. When both bond disorder and a finite mass term exist the localization length exponent varies continuously between $\sim 1.0$ and $\sim 7/3$.

cond-mat.mes-hall↗

arXiv2007

Quantum Hall plateau transition in the lowest Landau level of disordered graphene

We investigate, analytically and numerically, the effects of disorder on the density of states and on the localization properties of the relativistic two dimensional fermions in the lowest Landau level. Employing a supersymmetric technique, we calculate the exact density of states for the Cauchy (Lorentzian) distribution for various types of disorders. We use a numerical technique to establish the localization-delocalization (LD) transition in the lowest Landau level. For some types of disorder the LD transition is shown to belong to a different universality class, as compared to the corresponding nonrelativistic problem. The results are relevant to the integer quantum Hall plateau transitions observed in graphene.

cond-mat.mes-hall↗

arXiv2006

Quantum dynamics of an Ising spin-chain in a random transverse field

We consider an Ising spin-chain in a random transverse magnetic field and compute the zero temperature wave vector and frequency dependent dynamic structure factor numerically by using Jordan-Wigner transformation. Two types of distributions of magnetic fields are introduced. For a rectangular distribution, a dispersing branch is observed, and disorder tends to broaden the dispersion peak and close the excitation gap. For a binary distribution, a non-dispersing branch at almost zero energy is recovered. We discuss the relationship of our work to the neutron scattering measurement in $\mathrm{LiHoF_4}$.

cond-mat.str-el↗

arXiv2006

Replacing energy by von Neumann entropy in quantum phase transitions

In the thermodynamic limit two distinct states of matter cannot be analytic continuations of each other. Classical phase transitions are characterized by non-analyticities of the free energy. For quantum phase transitions (QPTs) the ground state energy often assumes the role of the free energy. But in a number of important cases this criterion fails to predict a QPT, such as the three-dimensional metal-insulator transition of non-interacting electrons in a random potential (Anderson localization). It is therefore essential that we find alternative criteria that can track fundamental changes in the internal correlations of the ground state wavefunction. Here we propose that QPTs are generally accompanied by non-analyticities of the von Neumann (entanglement) entropy. In particular, the entropy is non-analytic at the Anderson transition, where it exhibits unusual fractal scaling. We also examine two dissipative quantum systems of considerable interest to the study of decoherence and find that non-analyticities occur if and only if the system undergoes a QPT.

cond-mat.str-el↗