Searcharxiv⌕ Search

arXiv subjects

Yuan Dong

Publications and source records attributed to Yuan Dong.

38 records · Page 3Linked to original sources

Deep Learning Bandgaps of Topologically Doped Graphene

Manipulation of material properties via precise doping affords enormous tunable phenomena to explore. Recent advance shows that in the atomic and nano scales topological states of dopants play crucial roles in determining their properties. However, such determination is largely unknown due to the incredible size of topological states. Here, we present a case study of developing deep learning algorithms to predict bandgaps of boron-nitrogen pair doped graphene with arbitrary dopant topologies. A material descriptor system that enables to correlate structures with the bandgaps was developed for convolutional neuron networks (CNNs). Bandgaps calculated by the ab initio calculations and the corresponding structures were fed as input datasets to train VGG16 convolutional network, residual convolutional network, and concatenate convolutional network. Then these trained CNNs were used to predict bandgaps of doped graphene with various dopant topologies. All of them afford great prediction accuracy, showing square of the coefficient of correlation (R2) of > 90% and root-mean-square errors of ~ 0.1 eV for the predicted bandgaps. They are much better than those predicted by a shallow machine learning method - support vector machine. The transfer learning was further performed by leveraging data generated from smaller systems to improve the prediction for large systems. Success of this work provides a cornerstone for future investigation of topologically doped graphene and other 2D materials. Moreover, given ubiquitous existence of topologies in materials, this work will stimulate widespread interests in applying deep learning algorithms to topological design of materials crossing atomic, nano-, meso-, and macro- scales.

cond-mat.mtrl-sci↗

Scalable hierarchical parallel algorithm for the solution of super large-scale sparse linear equations

The parallel linear equations solver capable of effectively using 1000+ processors becomes the bottleneck of large-scale implicit engineering simulations. In this paper, we present a new hierarchical parallel master-slave-structural iterative algorithm for the solution of super large-scale sparse linear equations in distributed memory computer cluster. Through alternatively performing global equilibrium computation and local relaxation, our proposed algorithm will reach the specific accuracy requirement in a few of iterative steps. Moreover, each set/slave-processor majorly communicate with its nearest neighbors, and the transferring data between sets/slave-processors and master is always far below the set-neighbor communication. The corresponding algorithm for implicit finite element analysis has been implemented based on MPI library, and a super large 2-dimension square system of triangle-lattice truss structure under random static loads is simulated with over one billion degrees of freedom and up to 2001 processors on "Exploration 100" cluster in Tsinghua University. The numerical experiments demonstrate that this algorithm has excellent parallel efficiency and high scalability, and it may have broad application in other implicit simulations.

physics.comp-ph↗