arXiv subjects

Yuxi Zhou

Publications and source records attributed to Yuxi Zhou.

25 records · Page 2Linked to original sources

arXiv2025

KidneyTalk-open: No-code Deployment of a Private Large Language Model with Medical Documentation-Enhanced Knowledge Database for Kidney Disease

Privacy-preserving medical decision support for kidney disease requires localized deployment of large language models (LLMs) while maintaining clinical reasoning capabilities. Current solutions face three challenges: 1) Cloud-based LLMs pose data security risks; 2) Local model deployment demands technical expertise; 3) General LLMs lack mechanisms to integrate medical knowledge. Retrieval-augmented systems also struggle with medical document processing and clinical usability. We developed KidneyTalk-open, a desktop system integrating three technical components: 1) No-code deployment of state-of-the-art (SOTA) open-source LLMs (such as DeepSeek-r1, Qwen2.5) via local inference engine; 2) Medical document processing pipeline combining context-aware chunking and intelligent filtering; 3) Adaptive Retrieval and Augmentation Pipeline (AddRep) employing agents collaboration for improving the recall rate of medical documents. A graphical interface was designed to enable clinicians to manage medical documents and conduct AI-powered consultations without technical expertise. Experimental validation on 1,455 challenging nephrology exam questions demonstrates AddRep's effectiveness: achieving 29.1% accuracy (+8.1% over baseline) with intelligent knowledge integration, while maintaining robustness through 4.9% rejection rate to suppress hallucinations. Comparative case studies with the mainstream products (AnythingLLM, Chatbox, GPT4ALL) demonstrate KidneyTalk-open's superior performance in real clinical query. KidneyTalk-open represents the first no-code medical LLM system enabling secure documentation-enhanced medical Q&A on desktop. Its designs establishes a new framework for privacy-sensitive clinical AI applications. The system significantly lowers technical barriers while improving evidence traceability, enabling more medical staff or patients to use SOTA open-source LLMs conveniently.

cs.AI↗

arXiv2024

Deep Learning for Detecting and Early Predicting Chronic Obstructive Pulmonary Disease from Spirogram Time Series

Chronic Obstructive Pulmonary Disease (COPD) is a chronic lung condition characterized by airflow obstruction. Current diagnostic methods primarily rely on identifying prominent features in spirometry (Volume-Flow time series) to detect COPD, but they are not adept at predicting future COPD risk based on subtle data patterns. In this study, we introduce a novel deep learning-based approach, DeepSpiro, aimed at the early prediction of future COPD risk. DeepSpiro consists of four key components: SpiroSmoother for stabilizing the Volume-Flow curve, SpiroEncoder for capturing volume variability-pattern through key patches of varying lengths, SpiroExplainer for integrating heterogeneous data and explaining predictions through volume attention, and SpiroPredictor for predicting the disease risk of undiagnosed high-risk patients based on key patch concavity, with prediction horizons of 1, 2, 3, 4, 5 years, or even longer. Evaluated on the UK Biobank dataset, DeepSpiro achieved an AUC of 0.8328 for COPD detection and demonstrated strong predictive performance for future COPD risk (p-value < 0.001). In summary, DeepSpiro can effectively predicts the long-term progression of the COPD disease.

cs.LG↗

arXiv2024

A Deep Learning Method for Beat-Level Risk Analysis and Interpretation of Atrial Fibrillation Patients during Sinus Rhythm

Atrial Fibrillation (AF) is a common cardiac arrhythmia. Many AF patients experience complications such as stroke and other cardiovascular issues. Early detection of AF is crucial. Existing algorithms can only distinguish ``AF rhythm in AF patients'' from ``sinus rhythm in normal individuals'' . However, AF patients do not always exhibit AF rhythm, posing a challenge for diagnosis when the AF rhythm is absent. To address this, this paper proposes a novel artificial intelligence (AI) algorithm to distinguish ``sinus rhythm in AF patients'' and ``sinus rhythm in normal individuals'' in beat-level. We introduce beat-level risk interpreters, trend risk interpreters, addressing the interpretability issues of deep learning models and the difficulty in explaining AF risk trends. Additionally, the beat-level information fusion decision is presented to enhance model accuracy. The experimental results demonstrate that the average AUC for single beats used as testing data from CPSC 2021 dataset is 0.7314. By employing 150 beats for information fusion decision algorithm, the average AUC can reach 0.7591. Compared to previous segment-level algorithms, we utilized beats as input, reducing data dimensionality and making the model more lightweight, facilitating deployment on portable medical devices. Furthermore, we draw new and interesting findings through average beat analysis and subgroup analysis, considering varying risk levels.

eess.SP↗

arXiv2022

Learning Optimal Treatment Strategies for Sepsis Using Offline Reinforcement Learning in Continuous Space

Sepsis is a leading cause of death in the ICU. It is a disease requiring complex interventions in a short period of time, but its optimal treatment strategy remains uncertain. Evidence suggests that the practices of currently used treatment strategies are problematic and may cause harm to patients. To address this decision problem, we propose a new medical decision model based on historical data to help clinicians recommend the best reference option for real-time treatment. Our model combines offline reinforcement learning and deep reinforcement learning to solve the problem of traditional reinforcement learning in the medical field due to the inability to interact with the environment, while enabling our model to make decisions in a continuous state-action space. We demonstrate that, on average, the treatments recommended by the model are more valuable and reliable than those recommended by clinicians. In a large validation dataset, we find out that the patients whose actual doses from clinicians matched the decisions made by AI has the lowest mortality rates. Our model provides personalized and clinically interpretable treatment decisions for sepsis to improve patient care.

cs.LG↗

arXiv2021

Local Patch Network with Global Attention for Infrared Small Target Detection

Infrared small target detection plays an important role in the infrared search and tracking applications. In recent years, deep learning techniques were introduced to this task and achieved noteworthy effects. Following general object segmentation methods, existing deep learning methods usually processed the image from the global view. However, the imaging locality of small targets and extreme class-imbalance between the target and background pixels were not well-considered by these deep learning methods, which causes the low-efficiency on training and high-dependence on numerous data. A local patch network (LPNet) with global attention is proposed in this paper to detect small targets by jointly considering the global and local properties of infrared small target images. From the global view, a supervised attention module trained by the small target spread map is proposed to suppress most background pixels irrelevant with small target features. From the local view, local patches are split from global features and share the same convolution weights with each other in a patch net. By leveraging both the global and local properties, the data-driven framework proposed in this paper has fused multi-scale features for small target detection. Extensive synthetic and real data experiments show that the proposed method achieves the state-of-the-art performance compared with existing both conventional and deep learning methods.

eess.IV↗

arXiv2020

Opportunities and Challenges of Deep Learning Methods for Electrocardiogram Data: A Systematic Review

Background:The electrocardiogram (ECG) is one of the most commonly used diagnostic tools in medicine and healthcare. Deep learning methods have achieved promising results on predictive healthcare tasks using ECG signals. Objective:This paper presents a systematic review of deep learning methods for ECG data from both modeling and application perspectives. Methods:We extracted papers that applied deep learning (deep neural network) models to ECG data that were published between Jan. 1st of 2010 and Feb. 29th of 2020 from Google Scholar, PubMed, and the DBLP. We then analyzed each article according to three factors: tasks, models, and data. Finally, we discuss open challenges and unsolved problems in this area. Results: The total number of papers extracted was 191. Among these papers, 108 were published after 2019. Different deep learning architectures have been used in various ECG analytics tasks, such as disease detection/classification, annotation/localization, sleep staging, biometric human identification, and denoising. Conclusion: The number of works on deep learning for ECG data has grown explosively in recent years. Such works have achieved accuracy comparable to that of traditional feature-based approaches and ensembles of multiple approaches can achieve even better results. Specifically, we found that a hybrid architecture of a convolutional neural network and recurrent neural network ensemble using expert features yields the best results. However, there are some new challenges and problems related to interpretability, scalability, and efficiency that must be addressed. Furthermore, it is also worth investigating new applications from the perspectives of datasets and methods. Significance: This paper summarizes existing deep learning research using ECG data from multiple perspectives and highlights existing challenges and problems to identify potential future research directions.

eess.SP↗

arXiv2019

K-margin-based Residual-Convolution-Recurrent Neural Network for Atrial Fibrillation Detection

Atrial Fibrillation (AF) is an abnormal heart rhythm which can trigger cardiac arrest and sudden death. Nevertheless, its interpretation is mostly done by medical experts due to high error rates of computerized interpretation. One study found that only about 66% of AF were correctly recognized from noisy ECGs. This is in part due to insufficient training data, class skewness, as well as semantical ambiguities caused by noisy segments in an ECG record. In this paper, we propose a K-margin-based Residual-Convolution-Recurrent neural network (K-margin-based RCR-net) for AF detection from noisy ECGs. In detail, a skewness-driven dynamic augmentation method is employed to handle the problems of data inadequacy and class imbalance. A novel RCR-net is proposed to automatically extract both long-term rhythm-level and local heartbeat-level characters. Finally, we present a K-margin-based diagnosis model to automatically focus on the most important parts of an ECG record and handle noise by naturally exploiting expected consistency among the segments associated for each record. The experimental results demonstrate that the proposed method with 0.8125 F1NAOP score outperforms all state-of-the-art deep learning methods for AF detection task by 6.8%.

eess.SP↗