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Zhiyuan Chen

Publications and source records attributed to Zhiyuan Chen.

At least 19 recordsLinked to original sources

Finder: Agentic Closed-Loop Object Finding for Embodied Grounding

Finding the object referred to by language in a partially observed 3D scene is a core capability for embodied agents. Existing approaches either couple object search with online exploration, which can be costly when relevant observations have already been captured, or query pre-built open-vocabulary maps and scene graphs in a static, one-shot fashion. We present Finder, an agentic closed-loop object-finding primitive for embodied grounding. Instead of treating grounding as passive retrieval from a fixed scene representation, Finder maintains a typed loop state that links query-conditioned planning, scoped evidence gathering, candidate verification, and accept/continue/abort control. When evidence is incomplete or ambiguous, the loop can redirect subsequent perception and comparison rather than simply returning the top retrieved object. On open-vocabulary embodied Object Retrieval in Habitat/HM3D and real-world RGB-D scenes, Finder improves the averaged 1m success rate by 15.75 points over strong baselines. The same primitive also transfers to sequential object grounding and embodied object-centric question answering, improving spatial and temporal localization without changing the inner grounding protocol. Project page: https://finder-vln.github.io.

cs.CV↗

One- and two-dimensional cluster states for topological phase simulation and measurement-based quantum computation

Quantum entanglement is a fundamental resource for quantum information processing and serves as a critical benchmark for quantum hardware performance. Cluster states are a special class of entangled states that serve as universal resources for measurement-based quantum computation and possess an intrinsic symmetry-protected topological order, which confers robustness against symmetry-respecting noise. Here we report the scalable preparation and verification of genuine multipartite cluster states on the 105-qubit Zuchongzhi 3.1 superconducting processor. We achieve one-dimensional cluster states of up to 95 qubits and two-dimensional cluster states of up to 72 qubits. The symmetry-protected topological cluster states exhibit input-state-dependent robustness under symmetry-breaking perturbations due to an operational parity structure that enhances the performance of measurement-based quantum computation. Furthermore, we use our two-dimensional cluster states to implement the Deutsch-Jozsa algorithm within the measurement-based quantum computation framework, achieving higher output-state fidelity compared with traditional circuit-based models and a query efficiency advantage over classical approaches. Our work establishes a scalable platform that combines large-scale entanglement generation, symmetry-protected topological order and practical quantum algorithms to enable robust, fault-tolerant measurement-based quantum computation.

quant-ph↗

One Policy, Many Embodiments: Unified Camera-Centric Action Geometry Pre-training for Heterogeneous Embodied Manipulation

Scaling generalist vision-language-action (VLA) policies is severely bottlenecked by the inherent heterogeneity of embodied data, which spans diverse robot morphologies, camera configurations, and low-level action spaces. Existing paradigms typically address this mismatch through explicit action retargeting, human-to-robot video synthesis, or dataset-specific adaptation branches, fundamentally hindering the joint learning of a unified policy. We introduce UCAG-P, a camera-centric unified action formulation that structurally aligns heterogeneous embodied datasets into a shared geometric action space. Rather than treating robot-specific commands as the shared policy target, UCAG-P represents manipulation through camera-observable anchor motion in image and camera-frame coordinates, treating robot arms, humanoids, and human hands as different embodiments of a common action schema. A geometry-conditioned action translator combines predicted motion with target-embodiment kinematics to produce executable controls. The resulting decoupled architecture allows a shared VLA policy to learn transferable manipulation geometry while retaining embodiment-specific controllability. UCAG-P is trained on 4.03K hours of robot and simulation data and 2.34K hours of human demonstrations. A single checkpoint reaches 98.3% on LIBERO, 88.7% and 89.2% on RoboTwin Easy and Hard, 82.0% zero-shot on LIBERO-Plus, and 62.0% on RoboCasa GR-1, without benchmark-specific fine-tuning.

cs.RO↗

Do Privacy Policies Match with the Logs? An Empirical Study of Privacy Disclosure in Android Application Logs

Privacy policies are intended to inform users about how software systems collect and handle data, yet they often remain vague or incomplete. This paper presents an empirical study of patterns in log-related statements within privacy policies and their alignment with privacy disclosures observed in Android application logs. We analyzed 1,000 Android apps across multiple categories, generating 86,836,964 log entries. Our findings reveal that while most applications (88.0%) provide privacy policies, only 28.5% explicitly mention logging practices. Among those that reference logging, most clearly describe what information is logged; however, 27.7% of log-related statements remain overly simplistic or vague, offering limited insight into actual data collection. We further observed widespread privacy leakages in application logs, with 67.6% of apps leaking sensitive information not mentioned in their policies. Alarmingly, only 0.4% of applications demonstrated consistent alignment between declared policy contents and actual logged data. These findings highlight that current privacy policies provide incomplete or ambiguous descriptions of logging practices, which frequently do not align with actual logging behaviors.

cs.CR↗

Final assessment of radioactive impurities in the JUNO detector

The Jiangmen Underground Neutrino Observatory (JUNO) collaboration has completed the construction of the 20,000-ton liquid scintillator detector and the associated muon veto detector system. To meet the physics objectives, the materials used in the detector must exhibit low radioactive contamination. The single-event rate in the fiducial volume (R $<$ 17.2 m) of the scintillator is required to be approximately 7 Hz for energies above 0.7 MeV, resulting in an accidental coincidence background of about 1 event per day for reactor neutrino physics analyses. Since the beginning of the construction phase, we have screened the natural radioactivity content of thousands of materials, to select those that meet the design background budget. The radioactive impurity concentrations of the materials ultimately used in the JUNO detector are summarized in this paper. The construction of the entire detector and the subsequent filling of the liquid scintillator were completed in August 2025. From the initial data, the total count rate of natural radioactivity within the detector's fiducial volume has met the requirements and is sufficient to support the reactor antineutrino analysis.

physics.ins-det↗

A Low-energy Threshold and Multi-messenger Trigger System for the JUNO Experiment

The Jiangmen Underground Neutrino Observatory (JUNO) is a 20-kiloton liquid scintillator neutrino detector, located 650 meters (1800 m.w.e.) underground in Jiangmen, Guangdong, China. JUNO is primarily designed for reactor neutrino measurements and has been taking data since 2025. With the largest mass of its kind and an excellent energy resolution, JUNO is a leading observatory for high-precision measurements of MeV neutrinos. The standard global trigger system serves as the primary trigger for JUNO. We present a newly developed multi-messenger trigger system that extends the capabilities of the global trigger by providing a lower energy threshold and an independent monitoring capability. During the 2025 operation, it achieved an effective energy threshold of approximately 110 +/- 10 keV, providing a lower threshold configuration suitable for low-energy event analysis. The system shows the potential to further reduce the threshold to well below 100 keV. Based on the multi-messenger trigger system, an astrophysical monitor has been developed to receive and process external alerts from other messengers, such as gravitational-wave observations. A Transient Neutrino Burst Monitor is integrated to detect short-time-scale neutrino burst events and enables real-time monitoring of transient astrophysical phenomena. The system is sensitive to neutrino bursts from core-collapse supernovae within a distance of about 250 kpc.

hep-ex↗

StateLinFormer: Stateful Training Enhancing Long-term Memory in Navigation

Effective navigation intelligence relies on long-term memory to support both immediate generalization and sustained adaptation. However, existing approaches face a dilemma: modular systems rely on explicit mapping but lack flexibility, while Transformer-based end-to-end models are constrained by fixed context windows, limiting persistent memory across extended interactions. We introduce StateLinFormer, a linear-attention navigation model trained with a stateful memory mechanism that preserves recurrent memory states across consecutive training segments instead of reinitializing them at each batch boundary. This training paradigm effectively approximates learning on infinitely long sequences, enabling the model to achieve long-horizon memory retention. Experiments across both MAZE and ProcTHOR environments demonstrate that StateLinFormer significantly outperforms its stateless linear-attention counterpart and standard Transformer baselines with fixed context windows. Notably, as interaction length increases, persistent stateful training substantially improves context-dependent adaptation, suggesting an enhancement in the model's In-Context Learning (ICL) capabilities for navigation tasks.

cs.LG↗

AbICL: In-Context Learning for Antigen-Specific Antibody Affinity Ranking

Accurate ranking of antibody candidates according to their binding affinity is essential for therapeutic antibody discovery. However, existing methods treat affinity comparisons independently and ignore the contextual information encoded in other labeled comparisons, limiting their ability to capture antigen-specific binding landscapes. For many target antigens, a small number of experimentally characterized affinity comparisons are often available. An important question is whether the model can exploit these existing comparisons to infer antigen-specific ranking patterns that facilitate subsequent affinity ranking. This form of learning from labeled demonstrations closely resembles the paradigm of In-Context Learning, motivating us to revisit antibody affinity ranking from an ICL perspective. To this end, we propose AbICL, an ICL framework for antigen-specific antibody affinity ranking. AbICL combines a pretrained structural encoder with a context ranking head and is trained with an episodic meta-training strategy that enables the model to leverage support demonstrations for test-time adaptation without gradient updates. Experiments on the AbRank benchmark demonstrate that AbICL consistently outperforms existing ranking baselines across almost all data splits and evaluation benchmarks. Further analysis shows that the value of contextual demonstrations depends on how well they match the target inference task, and becomes increasingly pronounced under distribution shift and fine-grained affinity discrimination. These findings highlight the potential of ICL as an effective paradigm for antigen-specific antibody affinity ranking, particularly in challenging settings where a single global ranking function is insufficient.

cs.LG↗

Surface code logical operations on a superconducting quantum processor

Fault-tolerant quantum computation requires logical operations that manipulate encoded information while preserving quantum error-correction protection. In planar surface-code architectures, code deformation and lattice surgery provide a local, measurement-based route to such operations. Here we experimentally realize key elements of patch-based surface-code logical processing on a 107-qubit superconducting quantum processor. We first implement a reusable primitive layer comprising merge and split, patch expansion and shrinkage, and deformations mediated by domain walls and twist defects. We then compose these primitives to realize logical state routing, the logical controlled-NOT gate, and the single-qubit Hadamard and phase gates, which together form a Clifford-generating set. All operations are implemented on distance-three rotated surface-code patches with multi-round syndrome extraction and neural-network decoding, without post-selection. Our results advance superconducting surface-code experiments from protected logical memory to active, patch-based fault-tolerant logical operations.

quant-ph↗

MultiMolecule: a modular ecosystem for biomolecular sequence-model workflows

Biomolecular sequence models are increasingly reused outside the studies in which they were introduced, but public checkpoints rarely preserve the execution context needed to inspect source-defined behavior, adapt models to new assays, compare models under shared task definitions or deploy biological predictions. MultiMolecule is an open-source Python ecosystem that turns heterogeneous RNA, DNA and protein sequence-model releases into complete, source-checked model-family implementations with shared loading, workflow and prediction interfaces. The Resource state reported here includes 53 complete model-family implementations with 112 standardized model checkpoints, together with 16 curated dataset resources released through 39 public dataset repositories and 10 user-facing prediction pipelines. Standardized components are linked to source provenance, conversion or preparation code, source-reference checks, Extended Data summaries and public documentation, allowing users to inspect what was standardized, what behavior was checked and how each component enters training, evaluation, inference or deployment. By shifting reuse from repository-specific checkpoints to executable implementations connected to standardized checkpoints, curated datasets, Runner workflows and biological prediction pipelines, MultiMolecule provides common infrastructure for preserving source-defined model behavior, adapting models to new assays, enabling controlled evaluation and deploying biomolecular predictions.

q-bio.QM↗

Embedded underwater front-end electronics for the 3-inch photomultipliers in the JUNO experiment

The Jiangmen Underground Neutrino Observatory (JUNO) is a 20-kton liquid scintillator-based, low-radioactivity, multi-purpose neutrino detector located 693 meters (1800 m.w.e.) underground in the Guangdong province, China. To detect scintillation light produced in the target, the detector is equipped with 17,612 20-inch photomultipliers (PMTs), forming the Large PMT system (LPMT). In addition, 25,600 3-inch photomultipliers (the Small Photomultiplier System or SPMT) are deployed in the gaps between the LPMTs. This paper presents the design and performance of the underwater front-end electronics developed for the SPMT system. It details the individual electronics boards and their key components, the inter-board interfaces, the system-level design, and the firmware architecture that supports data acquisition and control. It also outlines mechanical and thermal integration, board validation procedures, and system performance metrics. The readout chain includes digitization of 128 PMT channels per unit, synchronized time-stamping, charge measurement, event packaging, and bandwidth management. Comprehensive validation confirms the system's readiness to meet JUNO's stringent physics goals. The underwater electronics achieve noise levels as low as 0.04 photoelectrons with minimal crosstalk (below 0.4%) and a bandwidth of 57 MB/s, ensuring reliable single photo-electron detection and operation under high-rate conditions. The SPMT system has now been fully integrated and installed in JUNO. Its commissioning and physics performance will be reported in a future publication.

physics.ins-det↗

Overview of the ClinicalSkillQA 2026 Shared Task on Continuous Perception and Procedural Reasoning in Clinical Skill Assessment

This paper presents an overview of the ClinicalSkillQA 2026 shared task, which was organized with the BioNLP Workshop at ACL 2026. The goal of this shared task is to evaluate continuous perception and procedural reasoning in clinical skill assessment by requiring systems to reconstruct the correct temporal order of shuffled clinical key frames and generate rationales grounded in clinical workflow knowledge. The benchmark contains 200 test-only instances sampled from clinical skill videos, covering three emergency-care procedures. Each instance is annotated with the ground-truth temporal order and an expert-verified rationale. A total of seven teams participated in the task, collectively making 90 submissions, with four teams providing system description papers. Systems are evaluated using Task Accuracy, Pairwise Accuracy, and BERTScore, which measure exact sequence reconstruction, local temporal consistency, and rationale quality, respectively. In this paper, we describe the task setup, dataset construction, and evaluation criteria. We further summarize the methodologies adopted by participating teams and present a comprehensive analysis of the submitted systems. The official results suggest that current models still struggle with continuous perception and procedural reasoning, especially when they must integrate visual evidence, temporal structure, and clinical workflow knowledge.

cs.HC↗

Dual-Thresholded Heatmap-Guided Proposal Clustering and Negative Certainty Supervision with Enhanced Base Network for Weakly Supervised Object Detection

Weakly supervised object detection (WSOD) has attracted significant attention in recent years, as it does not require box-level annotations. State-of-the-art methods generally adopt a multi-module network, which employs WSDDN as the multiple instance detection network module and uses multiple instance refinement modules to refine performance. However, these approaches suffer from three key limitations. First, existing methods tend to generate pseudo GT boxes that either focus only on discriminative parts, failing to capture the whole object, or cover the entire object but fail to distinguish between adjacent intra-class instances. Second, the foundational WSDDN architecture lacks a crucial background class representation for each proposal and exhibits a large semantic gap between its branches. Third, prior methods discard ignored proposals during optimization, leading to slow convergence. To address these challenges, we propose the Dual-thresholded heAtmap-guided proposal clustering and Negative Certainty supervision with Enhanced base network (DANCE) method for WSOD. Specifically, we first devise a heatmap-guided proposal selector (HGPS) algorithm, which utilizes dual thresholds on heatmaps to pre-select proposals, enabling pseudo GT boxes to both capture the full object extent and distinguish between adjacent intra-class instances. We then construct a weakly supervised basic detection network (WSBDN), which augments each proposal with a background class representation and uses heatmaps for pre-supervision to bridge the semantic gap between matrices. At last, we introduce a negative certainty supervision (NCS) loss on ignored proposals to accelerate convergence. Extensive experiments on the challenging PASCAL VOC and MS COCO datasets demonstrate the effectiveness and superiority of our method. Our code is publicly available at https://github.com/gyl2565309278/DANCE.

cs.CV↗

Semantics-Based Verification of an Implemented Shor Oracle for ECDLP in Qrisp

Shor-style quantum algorithms for the elliptic-curve discrete logarithm problem (ECDLP) are highly sensitive to the exact semantics of their group-operation oracles. Consequently, minor implementation choices can invalidate the intended mathematical model and lead to misleading conclusions. This paper introduces a semantics-first verification perspective for an end-to-end, compilable ECDLP implementation built on Qrisp. We specify the implemented oracle at the level of program semantics, derive refinement-style verification obligations for its key components, and provide a high-level complexity argument for the resulting oracle family. A small case study highlights that (i) the core point-update primitive agrees with a classical reference on well-formed inputs, yet (ii) controlled execution may violate the expected control law under the evaluated toolchain, despite a passing trivial control sanity check. These results position semantic auditing as a practical prerequisite for trustworthy ECDLP-oriented quantum software.

cs.SE↗

SciEval: A Benchmark for Automatic Evaluation of K-12 Science Instructional Materials

The need to evaluate instructional materials for K-12 science education has become increasingly important, as more educators use generative AI to create instructional materials. However, the review of instructional materials is time-consuming, expertise-intensive, and difficult to scale, motivating interest in automated evaluation approaches. While large language models (LLMs) have shown strong performance on general evaluation tasks, their performance and reliability on instructional materials remain unclear. To address this gap, we formulate Automatic Instructional Materials Evaluation (AIME) as a generative AI task that predicts scores and evidence using the rubric designed by the educator. We create a benchmark dataset and develop baseline models for AIME. First, we curate the first AIME dataset, SciEval, consisting of instructional materials annotated with pedagogy-aligned evaluation scores and evidence-based rationales. Expert annotations achieve high inter-rater reliability, resulting in a dataset of 273 lesson-level instructional materials evaluated across 13 criteria (N=3549) using the EQuIP rubric. Second, we test mainstream LLMs (GPT, Gemini, Llama, and Qwen) on SciEval and find that none achieve strong performance. Then we fine-tune Qwen3 on SciEval. Results on a held-out test set show that domain-aligned fine-tuning can achieve up to 11 percent performance gains, highlighting the importance of domain-specific fine-tuning for AIME and facilitating the use of LLMs in other educational tasks.

cs.AI↗

MM-MoralBench: A MultiModal Moral Evaluation Benchmark for Large Vision-Language Models

The rapid integration of Large Vision-Language Models (LVLMs) into critical domains necessitates comprehensive moral evaluation to ensure their alignment with human values. While extensive research has addressed moral evaluation in LLMs, text-centric assessments cannot adequately capture the complex contextual nuances and ambiguities introduced by visual modalities. To bridge this gap, we introduce MM-MoralBench, a multimodal moral evaluation benchmark grounded in Moral Foundations Theory. We construct unique multimodal scenarios by combining synthesized visual contexts with character dialogues to simulate real-world dilemmas where visual and linguistic information interact dynamically. Our benchmark assesses models across six moral foundations through moral judgment, classification, and response tasks. Extensive evaluations of over 20 LVLMs reveal that models exhibit pronounced moral alignment bias, diverging significantly from human consensus. Furthermore, our analysis indicates that general scaling or structural improvements yield diminishing returns in moral alignment, and thinking paradigm may trigger overthinking-induced failures in moral contexts, highlighting the necessity for targeted moral alignment strategies. Our benchmark is publicly available.

cs.CV↗

Fair splits flip the leaderboard: CHANRG reveals limited generalization in RNA secondary-structure prediction

Accurate prediction of RNA secondary structure underpins transcriptome annotation, mechanistic analysis of non-coding RNAs, and RNA therapeutic design. Recent gains from deep learning and RNA foundation models are difficult to interpret because current benchmarks may overestimate generalization across RNA families. We present the Comprehensive Hierarchical Annotation of Non-coding RNA Groups (CHANRG), a benchmark of 170{,}083 structurally non-redundant RNAs curated from more than 10 million sequences in Rfam~15.0 using structure-aware deduplication, genome-aware split design and multiscale structural evaluation. Across 29 predictors, foundation-model methods achieved the highest held-out accuracy but lost most of that advantage out of distribution, whereas structured decoders and direct neural predictors remained markedly more robust. This gap persisted after controlling for sequence length and reflected both loss of structural coverage and incorrect higher-order wiring. Together, CHANRG and a padding-free, symmetry-aware evaluation stack provide a stricter and batch-invariant framework for developing RNA structure predictors with demonstrable out-of-distribution robustness.

q-bio.BM↗

ICDAR 2025 Competition on End-to-End Document Image Machine Translation Towards Complex Layouts

Document Image Machine Translation (DIMT) seeks to translate text embedded in document images from one language to another by jointly modeling both textual content and page layout, bridging optical character recognition (OCR) and natural language processing (NLP). The DIMT 2025 Challenge advances research on end-to-end document image translation, a rapidly evolving area within multimodal document understanding. The competition features two tracks, OCR-free and OCR-based, each with two subtasks for small (less than 1B parameters) and large (greater than 1B parameters) models. Participants submit a single unified DIMT system, with the option to incorporate provided OCR transcripts. Running from December 10, 2024 to April 20, 2025, the competition attracted 69 teams and 27 valid submissions in total. Track 1 had 34 teams and 13 valid submissions, while Track 2 had 35 teams and 14 valid submissions. In this report, we present the challenge motivation, dataset construction, task definitions, evaluation protocol, and a summary of results. Our analysis shows that large-model approaches establish a promising new paradigm for translating complex-layout document images and highlight substantial opportunities for future research.

cs.CV↗