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At least 19 recordsLinked to original sources

The Value of Spike Timing: A Leakage-Resistant Benchmark of SNN Design Choices for Network Intrusion Detection

Spiking neural networks (SNNs) are increasingly studied for network intrusion detection, but comparative evidence on how neuron models and spike encodings affect performance remains limited. Evaluation choices can further influence the observed results when preprocessing, capture structure, or scenario information crosses the train-test boundary. We evaluate nine snnTorch neuron families with three spike encodings, yielding 27 SNN configurations across four intrusion-detection benchmarks. We first screen the complete design space and then repeat the evaluation using train-only transforms, seed-independent partitions, and capture- or scenario-aware separation. At the shared operating point, LeakyParallel/latency achieved the lowest mean rank in both sweeps but was not statistically separated from Leaky/latency; their screening order reversed when CTU-13 was excluded. Overall, screening and confirmation retained substantial rank agreement despite changes in measured performance. We then examine what latency coding contributes by holding the active spike set fixed and changing only its temporal organization. At the main T=25 operating point, mapping feature magnitude to spike time improved macro-F1 on all five confirmation protocols, while spreading the same spikes through time without that mapping could either improve or reduce performance. Latency coding thus combines informative spike timing with temporal network dynamics. Sparse input encoding does not directly imply sparse internal activity, although latency coding requires fewer fanout-weighted operations than rate coding in the evaluated models. These findings motivate separate assessment of SNN design, evaluation protocol, spike timing, and computational activity for static network-flow data.

cs.CR↗

Why Fine-Tuning Encourages Hallucinations and How to Fix It

Large language models are prone to hallucinating factually incorrect statements. A key source of these errors is exposure to new factual information through supervised fine-tuning (SFT), which can increase hallucinations w.r.t.~knowledge acquired during pre-training. Since these errors arise as a by-product of knowledge degradation, we explore whether established continual learning tools can mitigate them. We propose a self-distillation-based SFT method that facilitates effective factual learning while minimizing hallucinations w.r.t.~pre-existing knowledge by regularizing output-distribution drift. We also show that when new knowledge acquisition is unnecessary, suppressing factual plasticity by freezing parameter groups preserves task performance while reducing hallucinations. Lastly, we investigate the mechanism, contrasting capacity limitations, behavior cloning, and localized interference. Our experiments show that a main driver is interference among overlapping semantic representations, which self-distillation mitigates and an associative-memory model explains: forgetting grows with the overlap between new and stored facts.

cs.CL↗

Persistent Memory Through Triple-Loop Consolidation Under Stochastic Unit Turnover

Dissipative cognitive architectures maintain computation through continuous energy expenditure, where units that exhaust their energy are stochastically replaced with fresh random state. This creates a fundamental challenge: how can persistent, context-specific memory survive when all learnable state is periodically destroyed? Existing memory mechanisms -- including elastic weight consolidation, synaptic intelligence, and surprise-driven gating -- rely on gradient computation and are inapplicable to systems that do not perform it. We introduce Deep Memory (DM), a backpropagation-free persistent memory mechanism operating through a triple-loop consolidation cycle: (1) recording of expert-specific content centroids, (2) seeding of replaced units with stored representations, and (3) stabilization through continuous re-entry. Discrete expert routing via Mixture-of-Experts (MoE) gating is required, in the regimes tested, to prevent the centroid convergence that would render stored memories identical. We derive a Foster-Lyapunov drift bound for the full triple loop, showing that seeding rescales the turnover noise floor. Across $1{,}007$ simulation runs over thirteen blocks: (i) removing stable context-expert binding removes specialization ($\mathrm{MI}=1.10$ vs. $0.001$; $n=91$); (ii) DM achieves $R=0.984$ vs. $0.385$ without memory ($n=16$); (iii) continuous seeding reconstructs representations after interference ($R_\mathrm{recon}=0.978$; one-shot fails; $n=30$); (iv) the mechanism operates within a characterized $(K,p)$ envelope ($n=350$); (v) recording $\times$ seeding is the minimal critical dyad ($n=40$); (vi) associative and reservoir baselines (Hopfield, ESN) are compared under matched turnover ($n=370$). DM is thus a falsifiable, bounded mechanism for persistent memory in backpropagation-free cognitive systems, with functional parallels to hippocampal consolidation.

cs.NE↗

Axonal delay dispersion decides whether a neuron detects an event or a sequence, and predicts cortical column diameter

Cortical neurons fire sparsely -- often fewer than one spike per sensory window -- making rate coding insufficient and temporal coding a necessity. That conduction delays convert firing order into synchrony is long established. What governs which class of temporal feature a neuron detects -- one volley of coincident input, or two in a particular order -- has not been examined. We propose a delay-signature framework in which the axonal conduction delays converging on a dendritic branch constitute a physical key: only input sequences whose spike-time differences the delays compensate arrive synchronously, and coincidence detection, via calcium plateau thresholds, converts that synchrony into an all-or-none output. In simulations of an integrator-neuron model we report three results. First, a single physical scalar -- the dispersion of the delay set -- moves a population from event detection to order-selective sequence detection. The transition is emergent under random delays and connectivity: at narrow dispersion sequence detectors do not exist, and the dispersion at which they overtake event detectors tracks the inter-event interval with a slope statistically indistinguishable from one. This maps a computational distinction onto the anatomical one between myelinated and unmyelinated projections, making myelination a switch on what a neuron computes, not only a regulator of speed. Second, the same dispersion sets the code's limits: it bounds the longest codable interval and fixes an absolute timing tolerance of about a millisecond, with slowing better tolerated than speeding. Third, that millisecond window and horizontal conduction velocity together predict cortical column diameter, and the two areas with direct measurements fall where the relation puts them. One anatomically measurable parameter thus sets what a neuron detects and the limits of what it can represent.

q-bio.NC↗

The thermodynamic freedom of a thermodynamic computer

Thermodynamic computers are stochastic physical devices designed to perform calculations at the thermal energy scale. Their operation is constrained by the equations of stochastic thermodynamics, among which are a set of bounds, known as speed limits, that relate a thermodynamic computer's run time to its computational progress and the heat it dissipates. Using the Wasserstein speed limit we assess the thermodynamic efficiency of a simulation model of a thermodynamic computer trained to perform a standard machine-learning classification task. On this task the thermodynamic computer is as capable as a simple multilayer perceptron. We show that different inference protocols allow the computer to operate within 40\% of the thermodynamic limit of efficiency without loss of accuracy, or to perform inference increasingly rapidly at fixed accuracy and thermodynamic efficiency. These results indicate that a thermodynamic computer designed for a particular task retains considerable freedom in its thermodynamic operation.

cond-mat.stat-mech↗

A Fresh Look at Lamarckian Evolution and the Baldwin Effect

Baldwinian and Lamarckian evolution have existed for a long time in evolutionary algorithms (EAs) without ever dominating the academic literature or practical applications. In this work, we use modern empirical and theoretical methods to revisit Lamarckian and Baldwinian evolution and rigorously compare them with the generic Darwinian evolution. On the empirical side, we run a comprehensive suite of experiments on graphs from six different datasets from the recent GraphBench benchmark on Maximum Independent Set and Maximum Cut problems. Our results show that Baldwinian and Lamarckian evolution consistently outperform Darwinian evolution, confirming the great potential of local search augmented evolutionary algorithms. Notably, in the great majority of cases, all EAs outperform recent deep learning baselines and approach the performance of highly specialised heuristic and exact solvers. We furthermore report a high-performing set of generalist parameters for all studied evolution types that we hope will be of use to practitioners in future. On the theoretical side, we extend the existing DeceptiveLeadingBlocks benchmark to arbitrary block length $k$. For all constant $k$, we then prove asymptotically tight runtime bounds for the $(1+1)$ EA in the three evolution types on this benchmark. For Baldwinian evolution, these are independent of $k$, whereas for the other two evolution types, the runtimes steeply increase with growing value of $k$.

cs.NE↗

Small Molecule Optimization with Large Language Models

Molecular optimization, the process of designing molecules with desirable properties, represents a critical challenge in drug discovery. The recent advancements in large language models (LLMs) have opened new opportunities for their integration with traditional molecular optimization algorithms to improve performance. In this work, we propose Molecular Language Model powered Evolutionary Algorithm (Mol-E), an evolutionary algorithm that relies on the generative capabilities of LLMs trained on molecules and molecular properties. Scientific Contribution. Mol-E obtains the highest aggregate Top-10 AUC among the comparable full-23-task results considered here, scoring 17.500 in the task-agnostic regime, in which the oracle is treated strictly as a black box, and 20.551 in the task-informed regime, in which the optimizer receives a fixed semantic description of the objective. Mol-E also improves over the evaluated baselines on multi-property optimization with docking against DRD2, MK2, and AChE.

cs.LG↗

Dynamical stability for dense patterns in attractor neural networks

Recurrent neural networks are canonical models of biological memory. In these models, memories are represented by distributed patterns of neural activity that are stored in the recurrent connections between neurons, such that they become attractors of the network's dynamics. During memory recall, network dynamics thus converge toward one of these memory patterns when started from a noisy or partial cue. Therefore, memory performance critically hinges on the dynamical stability of the stored patterns. However, previous theoretical approaches only studied dynamical stability under highly restrictive conditions that do not readily apply to biological neural circuits. Here, we develop a theory of the local stability of discrete fixed points in a broad class of networks with graded neural activities and in the presence of noise. Using methods from random matrix theory, we analyze the bulk and outliers of the eigenvalue spectra of the Jacobians that characterize network dynamics around fixed points. We show that either all fixed points are stable or all of them are unstable, depending on whether their number is below a ``critical load for stability'', which is distinct from the classical critical capacity that measures the maximal number of achievable fixed points regardless of their stability. We further analyze the dependence of this critical load for stability on experimentally measurable quantities characterizing the statistics of memory patterns and the activation functions of neurons. Our analysis highlights the computational benefits of sparse-like patterns and threshold-linear activation functions and offers testable predictions for neural circuits supporting memory.

cond-mat.dis-nn↗

An Evolutionary Framework for Automatic Optimization Benchmark Generation via Large Language Models

Optimization benchmarks play a fundamental role in assessing algorithm performance; however, existing artificial benchmarks often fail to capture the diversity and irregularity of real-world problem structures, while benchmarks derived from real-world problems are costly and difficult to construct. To address these challenges, we propose an evolutionary automatic benchmark generation framework that leverages a large language model (LLM) as a generative operator, termed the LLM-driven evolutionary benchmark generator (LLM-EBG). In this framework, the LLM serves as an evolutionary operator that generates and evolves benchmark problems within a flexible, expressive representation space. As a case study, we generate unconstrained single-objective continuous minimization problems represented as mathematical expressions designed to induce significant performance differences between a genetic algorithm (GA) and differential evolution (DE). Experimental results show that LLM-EBG successfully produces benchmark problems in which the designated target algorithm consistently outperforms the comparative algorithm in more than 80\% of trials. Furthermore, exploratory landscape analysis reveals that benchmarks favoring GA are highly sensitive to variable scaling, demonstrating that the proposed framework can generate problems with distinct geometric characteristics that reflect the intrinsic search behaviors of different optimization algorithms.

cs.NE↗

Why shared attention vectors fail: a case for outcome-indexed tuning

Dimensional attention in learning is often implemented as a globally shared attention vector, where each stimulus dimension corresponds to a single scalar. These scalars are learned by models through gradient-descent on error, where predictive features acquire more salience. We show that under multi-outcome learning, where models predict more than one outcome, this shared vector becomes unstable; it collapses to its bounds and prevents the models from learning meaningful attentional tunings for learning and generalization. We address this by introducing an outcome-indexed attentional matrix that converts globally shared attentional tuning into an outcome-indexed representation. We present an analysis of the unstable shared vectors and derive the conditions under which it holds. Empirically, three synthetic experiments benchmark the proposed attention matrices and show that they converge to meaningful representations, something shared attention vectors fail to do. These results suggest that outcome-indexed attentional matrices are a general fix for gradient-based attentional processes, which improves models of learning under multi-outcome conditions.

cs.LG↗

Gradland: On Phenomenal Experience, Differentiated Across Many Dimensions

This paper investigates the hypothesis that the first-order structure of physical interactions, i.e. gradients or Jacobians, characterizes the structure of phenomenal experience. It does so in an idealized world inhabited by neural networks, Gradland, where the physics are known and the functions are (mostly) differentiable. The paper introduces two measures of Jacobian structure: effective rank and cohesion, based on Kirchhoff complexity. Applying the measures to a series of worked examples shows the hypothesis accounts for: (1) the duration of experience, that it can prolong over hundreds of milliseconds; (2) the difference between what is experienced vividly and obscurely; (3) the experience of texture; (4) the blooming buzzing confusion presumably experienced by newborns; (5) the difference between ideas that are held distinctly in mind and ideas that are confused; (6) what learning is like; and finally (7) the paper explains the function of rich, dense experience.

cs.AI↗

Effects of relational graph modularity and depth on the learning performance of neural networks

In recent years, graph-based machine learning techniques, such as reinforcement learning and graph neural networks, have garnered significant attention. While some recent studies have started to explore the relationship between the graph structure of neural networks and their predictive performance, they often limit themselves to a narrow range of model networks, particularly lacking mesoscale structures such as communities. Our work advances this area by conducting a more comprehensive investigation, incorporating realistic network structures characterized by heterogeneous degree distributions and community structures, which are typical characteristics of many real networks. These community structures offer a nuanced perspective on network architecture. Our analysis employs model networks such as random and scale-free networks, alongside a comparison with a biological neural network and its subsets for more detailed analysis. We examine the impact of these structural attributes on the performance of image classification tasks. Our findings reveal that structural properties do affect performance to some extent. Specifically, within moderate-depth architectures, networks featuring coherent, densely interconnected communities demonstrate enhanced learning capabilities. Crucially, we find that this advantage is strictly depth-dependent: extending the architecture to eight layers reverses the effect entirely. This comparison with the biological neural network emphasizes the relevance of our findings to real-world structures, suggesting an intriguing connection worth further exploration. This study contributes meaningfully to network science and machine learning, providing insights that could inspire the design of more biologically informed neural networks.

cs.LG↗

Encoding Tactile Stimuli for Braille Recognition with Organoids

This study proposes a transferable encoding strategy that maps tactile sensor data to electrical stimulation patterns, enabling neural organoids to perform an open-loop artificial tactile Braille classification task. Human forebrain organoids cultured on a low-density microelectrode array (MEA) are systematically stimulated to characterize the relationship between electrical stimulation parameters (number of pulse, phase amplitude, phase duration, and trigger delay) and organoid responses, measured as spike activity and spatial displacement of the center of activity. Implemented on event-based tactile inputs recorded from the Evetac sensor, our system achieved an average Braille letter classification accuracy of 61% with a single organoid, which increased significantly to 83% when responses from a three-organoid ensemble were combined. Additionally, the multi-organoid configuration demonstrated enhanced robustness against various types of artificially introduced noise. This research demonstrates the potential of organoids as low-power, adaptive bio-hybrid computational elements and provides a foundational encoding framework for future scalable bio-hybrid computing architectures.

cs.NE↗

Gradient-Free Training of Spiking Neural Networks via Low-Rank Evolution Strategies

Spiking Neural Networks (SNNs) offer compelling energy efficiency on neuromorphic hardware, yet their training remains challenging because the discrete spike threshold is non-differentiable. Surrogate-gradient methods sidestep this by approximating the derivative, but they impose backpropagation infrastructure that is incompatible with on-chip learning. Evolution Strategies (\es) are a natural gradient-free alternative, yet their computational cost scales with the number of parameters, making them impractical for large weight matrices. We present a method for training SNNs using EGGROLL, a low-rank factorisation of ES perturbations that reduces per-generation memory from $\mathcal{O}(mn)$ to $\mathcal{O}(r(m{+}n))$. Combining EGGROLL with a Leaky Integrate-and-Fire SNN on N-MNIST, we demonstrate that gradient-free training achieves 79.21% test accuracy while reducing per-generation wall-clock time by 2.23$\times$ relative to full-rank ES. Our results demonstrate EGGROLL is viable for SNN training, with a clear accuracy-speed tradeoff, compatible with training on neuromorphic hardware without surrogate gradients.

cs.NE↗

Spike-Aware INT8 Execution for Spiking Language Models on Commodity CPUs

Binary spike activations allow a language-model runtime to read only active weight columns and replace multiplications by weight sums. We implement this execution strategy in C++ for an 874M-parameter spike-gated language model. Sparse projections use column-major INT8 weights, integer accumulation, and one scale application per output channel; dense projections retain row-major access and FP32 activations. In a single-thread comparison using an early checkpoint, INT8 achieves 23.31 tokens/s versus 9.82 for FP32, while reducing weight storage from 3355.2 to 1087.4 MiB. A variant using INT4 on dense projections saves a further 17.4% of storage but reduces decode throughput by 46.6%. On an AMD Ryzen 7 5800X, the final INT8 checkpoint achieves 22.63 tokens/s on one thread and 47.90 on four threads; 512-token prefill reaches 94.68 tokens/s on eight threads. A separate ARM output-head case study records higher trimmed decode-window energy metrics for two candidate-verification configurations. The results characterize how activation-specific layouts and quantized kernels support CPU deployment of a spike-gated language model.

cs.NE↗

Geometric Reliability of Neural Population Codes: Sampling Calibration and Within-Session Nonstationarity

Trial-to-trial variability limits how reliably neural population geometry can be estimated, while comparisons across populations depend on neuron and trial counts, response quality, and clustered sampling. We quantified within-session geometric reliability using Shesha, the Spearman correlation between representational dissimilarity matrices estimated from independent trial subsets, in all 39 Steinmetz Neuropixels sessions and in olfactory bulb and piriform cortex recordings from Bolding and Franks. Steinmetz analyses matched neurons and repetitions, compared observed reliability with a stationary residual-bootstrap expectation, and used mouse-level or mouse-clustered inference. Mean matched reliability was 0.0402 across 312 area-by-session recordings. Regional differences and reliability above the stationary benchmark did not survive correction. Temporal effects received the strongest support: interleaving early and late trials increased reliability relative to blocked allocation ($Δ=0.02666$, $q=0.001953$), and RDM similarity declined with within-session lag (mean mouse-level slope $=-0.01912$, $q=0.001953$; $n=10$ mice). Outer-cross-fitted reliability was not associated with choice-direction coupling or stimulus or response-direction decoding after correction. Olfactory comparisons remained descriptive because few paired sessions and no animal identities were available. In held-out simulations, associative recurrence outperformed feedforward subspace denoising but not divisive normalization. Representational geometry became less reproducible with temporal separation within a session, and comparisons across neural populations require sampling calibration and independent inference.

q-bio.NC↗

Photonic reservoir computing with dimensionally compressed readout

This work addresses a hardware constraint in reservoir computing: the limited size of the readout layer imposed by systems with a physical readout. We investigate a strategy to accommodate this constraint based on random projection, which compresses high-dimensional reservoir states into a lower-dimensional subspace while preserving key properties of the source space and information- processing capabilities. To evaluate this approach, we compare a small, standalone time delay reservoir against a larger configuration whose output is projected down to match the same restricted readout dimension. Using task-independent metrics, we demonstrate that the distribution of information-processing capacities may differ between the two configurations, even at identical readout sizes. Furthermore, we perform a comprehensive hyperparameter scan to assess how both systems behave under varying physical regimes. Finally, we benchmark this approach on the standard NARMA10 task, showing that the random projection framework can yield superior performance compared to a standalone constrained reservoir, within specific compression range. These results provide a scalable pathway to bypass physical readout bottlenecks in hardware-based reservoir computing.

cs.NE↗

Emergent Charging Coordination in Electric Delivery Fleets

In electric delivery fleets, mid-shift charging is non-trivial: each vehicle must decide when, where and how much to charge to finish on time with battery above a safety floor. The choices are coupled: queues build where too many vehicles pick the same station. Prior work resolves this coupling with central dispatching, precomputed schedules or reservations, machinery that charging infrastructure rarely supports. Instead, we use a family of learning agents under purely local control: every vehicle runs the same policy, deciding alone from its time budgets and broadcast station occupancies, leading to emergent coordination without central control or messaging. We validate this paradigm in simulation on real OpenStreetMap networks of twenty cities, each with a frozen scenario calibrated by an omniscient Oracle (99.5% of shifts completed on time), whereas a naive greedy rule (nearest station on low battery) completes just 73%. Agents trained with neuroevolution (NEAT) and policy gradients (PPO) on four cities and deployed zero-shot across all twenty, sixteen never seen in training, complete 96.8% and 98.6% of shifts, with the policy-gradient controllers proving more robust when demand or vehicle characteristics drift beyond the trained regime. In contrast, tuned threshold heuristics that read vehicle urgency alone fall short in contended cities (~80%). Through training, these learning agents rediscover partial charging and short opportunistic sessions, and route around busy stations, cutting per-session queue waits from about 45 minutes to under 2. In summary, this coordination paradigm balances local urgency against public occupancy, reaching near-Oracle performance at minimal implementation cost.

cs.LG↗