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Siddharth Sivankutty

Publications and source records attributed to Siddharth Sivankutty.

17 recordsLinked to original sources

Interferometric lensless imaging: rank-one projections of image frequencies with speckle illuminations

Lensless illumination single-pixel imaging with a multicore fiber (MCF) is a computational imaging technique that enables potential endoscopic observations of biological samples at cellular scale. In this work, we show that this technique is tantamount to collecting multiple symmetric rank-one projections (SROP) of an interferometric matrix--a matrix encoding the spectral content of the sample image. In this model, each SROP is induced by the complex sketching vector shaping the incident light wavefront with a spatial light modulator (SLM), while the projected interferometric matrix collects up to $O(Q^2)$ image frequencies for a $Q$-core MCF. While this scheme subsumes previous sensing modalities, such as raster scanning (RS) imaging with beamformed illumination, we demonstrate that collecting the measurements of $M$ random SLM configurations--and thus acquiring $M$ SROPs--allows us to estimate an image of interest if $M$ and $Q$ scale log-linearly with the image sparsity level This demonstration is achieved both theoretically, with a specific restricted isometry analysis of the sensing scheme, and with extensive Monte Carlo experiments. On a practical side, we perform a single calibration of the sensing system robust to certain deviations to the theoretical model and independent of the sketching vectors used during the imaging phase. Experimental results made on an actual MCF system demonstrate the effectiveness of this imaging procedure on a benchmark image.

eess.IV

Interferometric single-pixel imaging with a multicore fiber

Lensless illumination single-pixel imaging with a multicore fiber (MCF) is a computational imaging technique that enables potential endoscopic observations of biological samples at cellular scale. In this work, we show that this technique is tantamount to collecting multiple symmetric rank-one projections (SROP) of a Hermitian \emph{interferometric} matrix -- a matrix encoding the spectral content of the sample image. In this model, each SROP is induced by the complex \emph{sketching} vector shaping the incident light wavefront with a spatial light modulator (SLM), while the projected interferometric matrix collects up to $O(Q^2)$ image frequencies for a $Q$-core MCF. While this scheme subsumes previous sensing modalities, such as raster scanning (RS) imaging with beamformed illumination, we demonstrate that collecting the measurements of $M$ random SLM configurations -- and thus acquiring $M$ SROPs -- allows us to estimate an image of interest if $M$ and $Q$ scale linearly (up to log factors) with the image sparsity level, hence requiring much fewer observations than RS imaging or a complete Nyquist sampling of the $Q \times Q$ interferometric matrix. This demonstration is achieved both theoretically, with a specific restricted isometry analysis of the sensing scheme, and with extensive Monte Carlo experiments. Experimental results made on an actual MCF system finally demonstrate the effectiveness of this imaging procedure on a benchmark image.

eess.SP

Tapered multi-core fiber for lensless endoscopes

We present a novel fiber-optic component, a "tapered multi-core fiber (MCF)", designed for integration into ultra-miniaturized endoscopes for minimally invasive two-photon point-scanning imaging and to address the power delivery issue that has faced MCF based lensless endoscopes. With it we achieve experimentally a factor 6.0 increase in two-photon signal yield while keeping the ability to point-scan by the memory effect, and a factor 8.9 sacrificing the memory effect. To reach this optimal design we first develop and validate a fast numerical model capable of predicting the essential properties of an arbitrarily tapered MCF from its structural parameters. We then use this model to identify the tapered MCF design parameters that result in a chosen set of target properties (point-spread function, delivered power, presence or absence of memory effect). We fabricate the identified target designs by stack-and-draw and post-processing on a CO$_{2}$ laser-based glass processing and splicing system. Finally we demonstrate the performance gain of the fabricated tapered MCFs in two-photon imaging when used in a lensless endoscope system. Our results show that tailoring of the taper profile brings new degrees of freedom that can be efficiently exploited for lensless endoscopes.

physics.optics

Compressive lensless endoscopy with partial speckle scanning

The lensless endoscope (LE) is a promising device to acquire in vivo images at a cellular scale. The tiny size of the probe enables a deep exploration of the tissues. Lensless endoscopy with a multicore fiber (MCF) commonly uses a spatial light modulator (SLM) to coherently combine, at the output of the MCF, few hundreds of beamlets into a focus spot. This spot is subsequently scanned across the sample to generate a fluorescent image. We propose here a novel scanning scheme, partial speckle scanning (PSS), inspired by compressive sensing theory, that avoids the use of an SLM to perform fluorescent imaging in LE with reduced acquisition time. Such a strategy avoids photo-bleaching while keeping high reconstruction quality. We develop our approach on two key properties of the LE: (i) the ability to easily generate speckles, and (ii) the memory effect in MCF that allows to use fast scan mirrors to shift light patterns. First, we show that speckles are sub-exponential random fields. Despite their granular structure, an appropriate choice of the reconstruction parameters makes them good candidates to build efficient sensing matrices. Then, we numerically validate our approach and apply it on experimental data. The proposed sensing technique outperforms conventional raster scanning: higher reconstruction quality is achieved with far fewer observations. For a fixed reconstruction quality, our speckle scanning approach is faster than compressive sensing schemes which require to change the speckle pattern for each observation.

physics.optics

Line-scan Compressive Raman imaging with spatio-spectral encoding

We report a line-scanning imaging modality of Compressive Raman technology with a single-pixel detector. The spatial information along the illumination line is encoded onto one axis of a digital micromirror device, while spectral coding masks are applied along the orthogonal direction. We demonstrate imaging and classification of three different chemical species.

physics.optics

Flexible lensless endoscope with a conformationally invariant multi-core fiber

The lensless endoscope represents the ultimate limit in miniaturization of imaging tools: an image can be transmitted through a (multi-mode or multi-core) fiber by numerical or physical inversion of the fiber's pre-measured transmission matrix. However, the transmission matrix changes completely with only minute conformational changes of the fiber, which has so far limited lensless endoscopes to fibers that must be kept static. In this letter we report for the first time a lensless endoscope which is exempt from the requirement of static fiber by designing and employing a custom-designed conformationally invariant fiber. We give experimental and theoretical validations and determine the parameter space over which the invariance is maintained.

physics.app-ph

Compressive Sampling Approach for Image Acquisition with Lensless Endoscope

The lensless endoscope is a promising device designed to image tissues in vivo at the cellular scale. The traditional acquisition setup consists in raster scanning during which the focused light beam from the optical fiber illuminates sequentially each pixel of the field of view (FOV). The calibration step to focus the beam and the sampling scheme both take time. In this preliminary work, we propose a scanning method based on compressive sampling theory. The method does not rely on a focused beam but rather on the random illumination patterns generated by the single-mode fibers. Experiments are performed on synthetic data for different compression rates (from 10 to 100% of the FOV).

cs.CV

Nonlinear imaging through a golden spiral multicore fiber

We report two-photon lensless imaging through a novel golden spiral multicore fiber. This unique layout optimizes the sidelobe levels, field of view, cross-talk, group delay and mode density to achieve a sidelobe contrast of atleast 10.9 dB. We demonstrate experimentally the ability to generate and scan a focal point with a femtosecond pulse and perform two-photon imaging.

physics.optics

High-resolution multimodal flexible coherent Raman endoscope

Coherent Raman scattering microscopy is a fast, label-free and chemically specific imaging technique that has a high potential for future in-vivo optical histology. However, its imaging depth into tissues is limited to the sub-millimeter range by absorption and scattering. Performing coherent Raman imaging in a fiber endoscope system is a crucial step to image deep inside living tissues and provide the information inaccessible with current microscopy tools. However the development of coherent Raman endoscopy has been hampered by several issues in the fiber delivery of the excitation pulses and signal collection. Here, we present a flexible, compact, and multimodal nonlinear endoscope (4.2 mm outer diameter, 71 mm rigid length) based on a resonantly scanned hollow-core Kagomé-lattice double-clad fiber. The fiber design allows distortion-less, background-free delivery of femtosecond excitation pulses and the back-collection of nonlinear signals through the same fiber. Sub-micron spatial resolution together with large field of view is made possible by the combination of a miniature objective lens together with a silica microsphere lens inserted into the fiber core. We demonstrate coherent anti-Stokes Raman scattering, 2-photon fluorescence and second harmonic generation imaging with 0.8 μm resolution over a field of view up to 320 μm and at a rate of 0.8 frames/s. These results pave the way for intra-operative label-free imaging applied to real-time histopathology diagnosis and surgery guidance.

physics.med-ph

Widefield lensless endoscopy with a multicore fiber

We demonstrate pixelation-free real-time widefield endoscopic imaging through an aperiodic multicore fiber (MCF) without any distal opto-mechanical elements or proximal scanners. Exploiting the memory effect in MCFs the images in our system are directly obtained without any post-processing using a static wavefront correction obtained from a single calibration procedure. Our approach allows for video-rate 3D widefield imaging of incoherently illuminated objects with imaging speed not limited by the wavefront shaping device refresh rate.

physics.optics

Extended field-of-view in a lensless endoscope using an aperiodic multicore fiber

We investigate lensless endoscopy using coherent beam combining and aperiodic multicore fibers (MCF). We show that diffracted orders, inherent to MCF with periodically arranged cores, dramatically reduce the field of view (FoV) and that randomness in MCF core positions can increase the FoV up to the diffraction limit set by a single fiber core, while maintaining MCF experimental feasibility. We demonstrate experimentally pixelation-free lensless endoscopy imaging over a 120 micron FoV with an aperiodic MCF designed with widely spaced cores. We show that this system is suitable to perform beam scanning imaging by simply applying a tilt to the proximal wavefront.

physics.optics

Single shot polarimetry imaging of multicore fiber

We report an experimental test of single-shot polarimetry applied to the problem of real-time monitoring of the output polarization states in each core within a multicore fiber bundle. The technique uses a stress-engineered optical element together with an analyzer and provides a point spread function whose shape unambiguously reveals the polarization state of a point source. We implement this technique to monitor, simultaneously and in real time, the output polarization states of up to 180 single mode fiber cores in both conventional and polarization-maintaining bundles. We demonstrate also that the technique can be used to fully characterize the polarization properties of each individual ber core including eigen-polarization states, phase delay and diattenuation.

physics.optics

Ultra-thin rigid endoscope: Two-photon imaging through a graded-index multi-mode fiber

Rigid endoscopes like graded-index (GRIN) lenses are known tools in biological imaging, but it is conceptually difficult to miniaturize them. In this letter, we demonstrate an ultra-thin rigid endoscope with a diameter of only 125 microns. In addition, we identify a domain where two-photon endoscopic imaging with fs-pulse excitation is possible. We validate the ultra-thin rigid endoscope consisting of a few cm of graded-index multi-mode fiber by using it to acquire optically sectioned two-photon fluorescence endoscopic images of three-dimensional samples.

physics.optics

Confocal supercritical angle fluorescence microscopy for cell membrane imaging

We demonstrate sub-wavelength sectioning on biological samples with a conventional confocal microscope. This optical sectioning is achieved by the phenomenon of supercritical angle fuorescence, wherein only a fluorophore next to the interface of a refractive index discontinuity can emit propagating components of radiation into the so-called forbidden angles. The simplicity of this technique allows it to be integrated with a high numerical aperture confocal scanning microscope by only a simple modification on the detection channel. Confocal-SAF microscopy would be a powerful tool to achieve high resolution surface imaging, especially for membrane imaging in biological samples

physics.optics