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Tim Menzies

Publications and source records attributed to Tim Menzies.

At least 73 records · Page 4Linked to original sources

DebtFree: Minimizing Labeling Cost in Self-Admitted Technical Debt Identification using Semi-Supervised Learning

Keeping track of and managing Self-Admitted Technical Debts (SATDs) is important for maintaining a healthy software project. Current active-learning SATD recognition tool involves manual inspection of 24% of the test comments on average to reach 90% of the recall. Among all the test comments, about 5% are SATDs. The human experts are then required to read almost a quintuple of the SATD comments which indicates the inefficiency of the tool. Plus, human experts are still prone to error: 95% of the false-positive labels from previous work were actually true positives. To solve the above problems, we propose DebtFree, a two-mode framework based on unsupervised learning for identifying SATDs. In mode1, when the existing training data is unlabeled, DebtFree starts with an unsupervised learner to automatically pseudo-label the programming comments in the training data. In contrast, in mode2 where labels are available with the corresponding training data, DebtFree starts with a pre-processor that identifies the highly prone SATDs from the test dataset. Then, our machine learning model is employed to assist human experts in manually identifying the remaining SATDs. Our experiments on 10 software projects show that both models yield a statistically significant improvement in effectiveness over the state-of-the-art automated and semi-automated models. Specifically, DebtFree can reduce the labeling effort by 99% in mode1 (unlabeled training data), and up to 63% in mode2 (labeled training data) while improving the current active learner's F1 relatively to almost 100%.

cs.SE↗

Revisiting Process versus Product Metrics: a Large Scale Analysis

Numerous methods can build predictive models from software data. However, what methods and conclusions should we endorse as we move from analytics in-the-small (dealing with a handful of projects) to analytics in-the-large (dealing with hundreds of projects)? To answer this question, we recheck prior small-scale results (about process versus product metrics for defect prediction and the granularity of metrics) using 722,471 commits from 700 Github projects. We find that some analytics in-the-small conclusions still hold when scaling up to analytics in-the-large. For example, like prior work, we see that process metrics are better predictors for defects than product metrics (best process/product-based learners respectively achieve recalls of 98\%/44\% and AUCs of 95\%/54\%, median values). That said, we warn that it is unwise to trust metric importance results from analytics in-the-small studies since those change dramatically when moving to analytics in-the-large. Also, when reasoning in-the-large about hundreds of projects, it is better to use predictions from multiple models (since single model predictions can become confused and exhibit a high variance).

cs.SE↗

Omni: Automated Ensemble with Unexpected Models against Adversarial Evasion Attack

Background: Machine learning-based security detection models have become prevalent in modern malware and intrusion detection systems. However, previous studies show that such models are susceptible to adversarial evasion attacks. In this type of attack, inputs (i.e., adversarial examples) are specially crafted by intelligent malicious adversaries, with the aim of being misclassified by existing state-of-the-art models (e.g., deep neural networks). Once the attackers can fool a classifier to think that a malicious input is actually benign, they can render a machine learning-based malware or intrusion detection system ineffective. Goal: To help security practitioners and researchers build a more robust model against non-adaptive, white-box, and non-targeted adversarial evasion attacks through the idea of an ensemble model. Method: We propose an approach called Omni, the main idea of which is to explore methods that create an ensemble of "unexpected models"; i.e., models whose control hyperparameters have a large distance to the hyperparameters of an adversary's target model, with which we then make an optimized weighted ensemble prediction. Result: In studies with five types of adversarial evasion attacks (FGSM, BIM, JSMA, DeepFooland Carlini-Wagner) on five security datasets (NSL-KDD, CIC-IDS-2017, CSE-CIC-IDS2018, CICAnd-Mal2017, and the Contagio PDF dataset), we show Omni is a promising approach as a defense strategy against adversarial attacks when compared with other baseline treatments. Conclusion: When employing ensemble defense against adversarial evasion attacks, we suggest creating an ensemble with unexpected models that are distant from the attacker's expected model (i.e., target model) through methods such as hyperparameter optimization.

cs.CR↗

PyTorrent: A Python Library Corpus for Large-scale Language Models

A large scale collection of both semantic and natural language resources is essential to leverage active Software Engineering research areas such as code reuse and code comprehensibility. Existing machine learning models ingest data from Open Source repositories (like GitHub projects) and forum discussions (like Stackoverflow.com), whereas, in this showcase, we took a step backward to orchestrate a corpus titled PyTorrent that contains 218,814 Python package libraries from PyPI and Anaconda environment. This is because earlier studies have shown that much of the code is redundant and Python packages from these environments are better in quality and are well-documented. PyTorrent enables users (such as data scientists, students, etc.) to build off the shelf machine learning models directly without spending months of effort on large infrastructure. The dataset, schema and a pretrained language model is available at: https://github.com/fla-sil/PyTorrent

cs.SE↗

FRUGAL: Unlocking SSL for Software Analytics

Standard software analytics often involves having a large amount of data with labels in order to commission models with acceptable performance. However, prior work has shown that such requirements can be expensive, taking several weeks to label thousands of commits, and not always available when traversing new research problems and domains. Unsupervised Learning is a promising direction to learn hidden patterns within unlabelled data, which has only been extensively studied in defect prediction. Nevertheless, unsupervised learning can be ineffective by itself and has not been explored in other domains (e.g., static analysis and issue close time). Motivated by this literature gap and technical limitations, we present FRUGAL, a tuned semi-supervised method that builds on a simple optimization scheme that does not require sophisticated (e.g., deep learners) and expensive (e.g., 100% manually labelled data) methods. FRUGAL optimizes the unsupervised learner's configurations (via a simple grid search) while validating our design decision of labelling just 2.5% of the data before prediction. As shown by the experiments of this paper FRUGAL outperforms the state-of-the-art adoptable static code warning recognizer and issue closed time predictor, while reducing the cost of labelling by a factor of 40 (from 100% to 2.5%). Hence we assert that FRUGAL can save considerable effort in data labelling especially in validating prior work or researching new problems. Based on this work, we suggest that proponents of complex and expensive methods should always baseline such methods against simpler and cheaper alternatives. For instance, a semi-supervised learner like FRUGAL can serve as a baseline to the state-of-the-art software analytics.

cs.SE↗

Crowdsourcing the State of the Art(ifacts)

In any field, finding the "leading edge" of research is an on-going challenge. Researchers cannot appease reviewers and educators cannot teach to the leading edge of their field if no one agrees on what is the state-of-the-art. Using a novel crowdsourced "reuse graph" approach, we propose here a new method to learn this state-of-the-art. Our reuse graphs are less effort to build and verify than other community monitoring methods (e.g. artifact tracks or citation-based searches). Based on a study of 170 papers from software engineering (SE) conferences in 2020, we have found over 1,600 instances of reuse; i.e., reuse is rampant in SE research. Prior pessimism about a lack of reuse in SE research may have been a result of using the wrong methods to measure the wrong things.

cs.SE↗

Lessons learned from hyper-parameter tuning for microservice candidate identification

When optimizing software for the cloud, monolithic applications need to be partitioned into many smaller *microservices*. While many tools have been proposed for this task, we warn that the evaluation of those approaches has been incomplete; e.g. minimal prior exploration of hyperparameter optimization. Using a set of open source Java EE applications, we show here that (a) such optimization can significantly improve microservice partitioning; and that (b) an open issue for future work is how to find which optimizer works best for different problems. To facilitate that future work, see [https://github.com/yrahul3910/ase-tuned-mono2micro](https://github.com/yrahul3910/ase-tuned-mono2micro) for a reproduction package for this research.

cs.SE↗

Fairer Software Made Easier (using "Keys")

Can we simplify explanations for software analytics? Maybe. Recent results show that systems often exhibit a "keys effect"; i.e. a few key features control the rest. Just to say the obvious, for systems controlled by a few keys, explanation and control is just a matter of running a handful of "what-if" queries across the keys. By exploiting the keys effect, it should be possible to dramatically simplify even complex explanations, such as those required for ethical AI systems.

cs.SE↗

Bias in Machine Learning Software: Why? How? What to do?

Increasingly, software is making autonomous decisions in case of criminal sentencing, approving credit cards, hiring employees, and so on. Some of these decisions show bias and adversely affect certain social groups (e.g. those defined by sex, race, age, marital status). Many prior works on bias mitigation take the following form: change the data or learners in multiple ways, then see if any of that improves fairness. Perhaps a better approach is to postulate root causes of bias and then applying some resolution strategy. This paper postulates that the root causes of bias are the prior decisions that affect- (a) what data was selected and (b) the labels assigned to those examples. Our Fair-SMOTE algorithm removes biased labels; and rebalances internal distributions such that based on sensitive attribute, examples are equal in both positive and negative classes. On testing, it was seen that this method was just as effective at reducing bias as prior approaches. Further, models generated via Fair-SMOTE achieve higher performance (measured in terms of recall and F1) than other state-of-the-art fairness improvement algorithms. To the best of our knowledge, measured in terms of number of analyzed learners and datasets, this study is one of the largest studies on bias mitigation yet presented in the literature.

cs.LG↗

Assessing Practitioner Beliefs about Software Engineering

Software engineering is a highly dynamic discipline. Hence, as times change, so too might our beliefs about core processes in this field. This paper checks some five beliefs that originated in the past decades that comment on the relationships between (i) developer productivity; (ii) software quality and (iii) years of developer experience. Using data collected from 1,356 developers in the period 1995 to 2006, we found support for only one of the five beliefs titled "Quality entails productivity". We found no clear support for four other beliefs based on programming languages and software developers. However, from the sporadic evidence of the four other beliefs we learned that a narrow scope could delude practitioners in misinterpreting certain effects to hold in their day to day work. Lastly, through an aggregated view of assessing the five beliefs, we find programming languages act as a confounding factor for developer productivity and software quality. Thus the overall message of this work is that it is both important and possible to revisit old beliefs in SE. Researchers and practitioners should routinely retest old beliefs.

cs.SE↗

Simpler Hyperparameter Optimization for Software Analytics: Why, How, When?

How to make software analytics simpler and faster? One method is to match the complexity of analysis to the intrinsic complexity of the data being explored. For example, hyperparameter optimizers find the control settings for data miners that improve for improving the predictions generated via software analytics. Sometimes, very fast hyperparameter optimization can be achieved by just DODGE-ing away from things tried before. But when is it wise to use DODGE and when must we use more complex (and much slower) optimizers? To answer this, we applied hyperparameter optimization to 120 SE data sets that explored bad smell detection, predicting Github ssue close time, bug report analysis, defect prediction, and dozens of other non-SE problems. We find that DODGE works best for data sets with low "intrinsic dimensionality" (D = 3) and very poorly for higher-dimensional data (D over 8). Nearly all the SE data seen here was intrinsically low-dimensional, indicating that DODGE is applicable for many SE analytics tasks.

cs.SE↗

Simpler Hyperparameter Optimization for Software Analytics: Why, How, When?

How can we make software analytics simpler and faster? One method is to match the complexity of analysis to the intrinsic complexity of the data being explored. For example, hyperparameter optimizers find the control settings for data miners that improve the predictions generated via software analytics. Sometimes, very fast hyperparameter optimization can be achieved by "DODGE-ing"; i.e. simply steering way from settings that lead to similar conclusions. But when is it wise to use that simple approach and when must we use more complex (and much slower) optimizers?} To answer this, we applied hyperparameter optimization to 120 SE data sets that explored bad smell detection, predicting Github issue close time, bug report analysis, defect prediction, and dozens of other non-SE problems. We find that the simple DODGE works best for data sets with low "intrinsic dimensionality" (u ~ 3) and very poorly for higher-dimensional data (u > 8). Nearly all the SE data seen here was intrinsically low-dimensional, indicating that DODGE is applicable for many SE analytics tasks.

cs.SE↗

On the Value of Oversampling for Deep Learning in Software Defect Prediction

One truism of deep learning is that the automatic feature engineering (seen in the first layers of those networks) excuses data scientists from performing tedious manual feature engineering prior to running DL. For the specific case of deep learning for defect prediction, we show that that truism is false. Specifically, when we preprocess data with a novel oversampling technique called fuzzy sampling, as part of a larger pipeline called GHOST (Goal-oriented Hyper-parameter Optimization for Scalable Training), then we can do significantly better than the prior DL state of the art in 14/20 defect data sets. Our approach yields state-of-the-art results significantly faster deep learners. These results present a cogent case for the use of oversampling prior to applying deep learning on software defect prediction datasets.

cs.SE↗

Mining Scientific Workflows for Anomalous Data Transfers

Modern scientific workflows are data-driven and are often executed on distributed, heterogeneous, high-performance computing infrastructures. Anomalies and failures in the workflow execution cause loss of scientific productivity and inefficient use of the infrastructure. Hence, detecting, diagnosing, and mitigating these anomalies are immensely important for reliable and performant scientific workflows. Since these workflows rely heavily on high-performance network transfers that require strict QoS constraints, accurately detecting anomalous network performance is crucial to ensure reliable and efficient workflow execution. To address this challenge, we have developed X-FLASH, a network anomaly detection tool for faulty TCP workflow transfers. X-FLASH incorporates novel hyperparameter tuning and data mining approaches for improving the performance of the machine learning algorithms to accurately classify the anomalous TCP packets. X-FLASH leverages XGBoost as an ensemble model and couples XGBoost with a sequential optimizer, FLASH, borrowed from search-based Software Engineering to learn the optimal model parameters. X-FLASH found configurations that outperformed the existing approach up to 28\%, 29\%, and 40\% relatively for F-measure, G-score, and recall in less than 30 evaluations. From (1) large improvement and (2) simple tuning, we recommend future research to have additional tuning study as a new standard, at least in the area of scientific workflow anomaly detection.

cs.SE↗

How to Better Distinguish Security Bug Reports (using Dual Hyperparameter Optimization

Background: In order that the general public is not vulnerable to hackers, security bug reports need to be handled by small groups of engineers before being widely discussed. But learning how to distinguish the security bug reports from other bug reports is challenging since they may occur rarely. Data mining methods that can find such scarce targets require extensive optimization effort. Goal: The goal of this research is to aid practitioners as they struggle to optimize methods that try to distinguish between rare security bug reports and other bug reports. Method: Our proposed method, called Swift, is a dual optimizer that optimizes both learner and pre-processor options. Since this is a large space of options, Swift uses a technique called epsilon-dominance that learns how to avoid operations that do not significantly improve performance. Result: When compared to recent state-of-the-art results (from FARSEC which is published in TSE'18), we find that the Swift's dual optimization of both pre-processor and learner is more useful than optimizing each of them individually. For example, in a study of security bug reports from the Chromium dataset, the median recalls of FARSEC and Swift were 15.7% and 77.4%, respectively. For another example, in experiments with data from the Ambari project, the median recalls improved from 21.5% to 85.7% (FARSEC to SWIFT). Conclusion: Overall, our approach can quickly optimize models that achieve better recalls than the prior state-of-the-art. These increases in recall are associated with moderate increases in false positive rates (from 8% to 24%, median). For future work, these results suggest that dual optimization is both practical and useful.

cs.SE↗

Structuring a Comprehensive Software Security Course Around the OWASP Application Security Verification Standard

Lack of security expertise among software practitioners is a problem with many implications. First, there is a deficit of security professionals to meet current needs. Additionally, even practitioners who do not plan to work in security may benefit from increased understanding of security. The goal of this paper is to aid software engineering educators in designing a comprehensive software security course by sharing an experience running a software security course for the eleventh time. Through all the eleven years of running the software security course, the course objectives have been comprehensive - ranging from security testing, to secure design and coding, to security requirements to security risk management. For the first time in this eleventh year, a theme of the course assignments was to map vulnerability discovery to the security controls of the Open Web Application Security Project (OWASP) Application Security Verification Standard (ASVS). Based upon student performance on a final exploratory penetration testing project, this mapping may have increased students' depth of understanding of a wider range of security topics. The students efficiently detected 191 unique and verified vulnerabilities of 28 different Common Weakness Enumeration (CWE) types during a three-hour period in the OpenMRS project, an electronic health record application in active use.

cs.SE↗

Empirical Standards for Software Engineering Research

Empirical Standards are natural-language models of a scientific community's expectations for a specific kind of study (e.g. a questionnaire survey). The ACM SIGSOFT Paper and Peer Review Quality Initiative generated empirical standards for research methods commonly used in software engineering. These living documents, which should be continuously revised to reflect evolving consensus around research best practices, will improve research quality and make peer review more effective, reliable, transparent and fair.

cs.SE↗

How Different is Test Case Prioritization for Open and Closed Source Projects?

Improved test case prioritization means that software developers can detect and fix more software faults sooner than usual. But is there one "best" prioritization algorithm? Or do different kinds of projects deserve special kinds of prioritization? To answer these questions, this paper applies nine prioritization schemes to 31 projects that range from (a) highly rated open-source Github projects to (b) computational science software to (c) a closed-source project. We find that prioritization approaches that work best for open-source projects can work worst for the closed-source project (and vice versa). From these experiments, we conclude that (a) it is ill-advised to always apply one prioritization scheme to all projects since (b) prioritization requires tuning to different project types.

cs.SE↗